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1.
Front Plant Sci ; 14: 1155670, 2023.
Article in English | MEDLINE | ID: mdl-37360709

ABSTRACT

Dollar spot caused by Clarireedia spp. (formerly Sclerotinia homoeocarpa) is an economically destructive fungal disease of turfgrass that can significantly compromise turf quality, playability, and aesthetic value. Fungicides are frequently used to manage the disease but are costly and potentially unfavorable to the environment. Repeated use of some active ingredients has resulted in reduced efficacy on C. jacksonii causing dollar spot in cool-season turfgrasses in the US. Experiments were conducted to study fungicide sensitivity of Clarireedia spp. as well as to develop alternatives to fungicides against dollar spot on warm-season turfgrass in Georgia. First, 79 isolates of Clarireedia spp. collected across the state were tested on fungicide-amended agar plates for their sensitivity to thiophanate-methyl (benzimidazole) and propiconazole (dimethyl inhibitor). Seventy-seven isolates (97.5%) were sensitive (0.001 to 0.654 µg/mL) and two isolates (2.5%) were found resistant (>1000 µg/mL) to thiophanate-methyl. However, in the case of propiconazole, 27 isolates (34.2%) were sensitive (0.005 to 0.098 µg/mL) while 52 isolates (65.8%) were resistant (0.101 to 3.820 µg/mL). Next, the efficacy of three bio- and six synthetic fungicides and ten different combinations were tested in vitro against C. monteithiana. Seven bio- and synthetic fungicide spray programs comprising Bacillus subtilis QST713 and propiconazole were further tested, either alone or in a tank mix in a reduced rate, on dollar spot infected bermudagrass 'TifTuf' in growth chamber and field environments. These fungicides were selected as they were found to significantly reduce pathogen growth up to 100% on in vitro assays. The most effective spray program in growth chamber assays was 100% B. subtilis QST713 in rotation with 75% B. subtilis QST713 + 25% propiconazole tank mix applied every 14 days. However, the stand-alone application of the biofungicide B. subtilis QST713 every seven days was an effective alternative and equally efficacious as propiconazole, suppressing dollar spot severity and AUDPC up to 75%, while resulting in acceptable turf quality (>7.0) in field experiments. Our study suggests that increased resistance of Clarireedia spp. to benzimidazoles and dimethyl inhibitors warrants continuous surveillance and that biofungicides hold promise to complement synthetic fungicides in an efficacious and environmentally friendly disease management program.

2.
Eur J Clin Nutr ; 72(1): 136-141, 2018 01.
Article in English | MEDLINE | ID: mdl-28952607

ABSTRACT

BACKGROUND/OBJECTIVES: Vitamin K status has been linked to fat and glucose metabolism by several authors, but whether high vitamin K intake influences body weight or composition has remained unclear. Here we tested the hypothesis that increased vitamin K intake decreases body fat or fat distribution. SUBJECTS/METHODS: In a randomized placebo-controlled human intervention trial, 214 postmenopausal women, 55-65 years of age, received either 180 mcg/day of vitamin K2 (menaquinone-7, MK-7) or placebo for 3 years. Osteocalcin (OC) carboxylation was used as a marker for vitamin K status, and fat distribution was assessed by dual-energy X-ray absorptiometry total body scan. RESULTS: In the total cohort, MK-7 supplementation increased circulating carboxylated OC (cOC) but had no effect on body composition. In those with an above-median response in OC carboxylation ('good responders'), MK-7 treatment resulted in a significant increase in total and human molecular weight adiponectin and a decrease in abdominal fat mass and in the estimated visceral adipose tissue area compared with the placebo group and the poor responders. CONCLUSIONS: The fact that changes in body composition measures or markers for fat or glucose metabolism were not associated with changes in uncarboxylated OC (ucOC) does not support the assumption that ucOC stimulates fat metabolism in humans. Instead, high vitamin K2 intake may support reducing body weight, abdominal and visceral fat, notably in subjects showing a strong increase in cOC. A causal relation between the changes in cOC and body fat or distribution cannot be concluded from these data.


Subject(s)
Adipose Tissue/drug effects , Body Weight/drug effects , Postmenopause , Vitamin K 2/analogs & derivatives , Adipose Tissue/metabolism , Aged , Body Composition/drug effects , Body Composition/physiology , Double-Blind Method , Female , Humans , Intra-Abdominal Fat/drug effects , Middle Aged , Osteocalcin/blood , Osteocalcin/chemistry , Osteocalcin/physiology , Placebos , Vitamin K 2/administration & dosage , Waist Circumference/drug effects
3.
Eur J Clin Nutr ; 71(12): 1423-1428, 2017 12.
Article in English | MEDLINE | ID: mdl-28812579

ABSTRACT

BACKGROUND/OBJECTIVES: This study aims to investigate the reproducibility and relative validity of the Dutch food frequency questionnaire (FFQ), to estimate intake of dietary phylloquinone and menaquinones compared with 24-h dietary recalls (24HDRs) and plasma markers of vitamin K status. SUBJECTS/METHODS: In a cross-sectional study among 63 men and 58 women, the FFQ was completed three times over a 1-year period and the reproducibility was calculated over these measurements. Twelve-monthly 24HDR were collected to estimate relative validity. In addition, the relative validity of the FFQ, compared with plasma phylloquinone and desphospho-uncarboxylated matrix Gla protein (dpucMGP), was assessed cross-sectionally among 507 postmenopausal women. RESULTS: Intraclass correlations showed a good reproducibility, with correlations ranging from 0.65 to 0.83. The relative validity for phylloquinone intake compared with 24HDR was lower for women (rs=0.28) than men (rs=0.40). The relative validity, compared with 24HDR, for intake of short-chain menaquinones were ranging between 0.30 and 0.34. Long-chain menaquinones showed good relative validity (rs=0.60-0.69). Plasma phylloquinone concentrations were weakly correlated with phylloquinone intake (rs=0.16 (0.07-0.24). Plasma dpucMGP was negatively but weakly correlated with phylloquinone intake (rs=-0.09 (-0.18; -0.01)) and long-chain menaquinones (rs=-0.13 (-0.21; -0.04)), but not with short-chain menaquinones (rs=-0.04 (-0.13; 0.05)). CONCLUSIONS: The FFQ is reproducible to rank subjects for phylloquinone and menaquinone intake.The relative validity of our FFQ, compared with 24HDR, to estimate intake of phylloquinone and short-chain menaquinones was low, but the relative validity for long-chain menaquinones was good. The relative validity of our FFQ, compared with plasma phylloquinone and dpucMGP, was relatively low for both phylloquinone and menaquinone intake.


Subject(s)
Diet , Surveys and Questionnaires , Vitamin K 1/administration & dosage , Vitamin K 2/administration & dosage , Adult , Biomarkers/blood , Body Mass Index , Cross-Sectional Studies , Female , Humans , Male , Mental Recall , Netherlands , Nutrition Assessment , Nutritional Status , Reproducibility of Results , Vitamin K 1/blood , Vitamin K 2/blood , Young Adult
4.
Eur J Clin Nutr ; 70(7): 831-6, 2016 07.
Article in English | MEDLINE | ID: mdl-26908424

ABSTRACT

BACKGROUND: In a previous human intervention study, we observed an improved vitamin K status after 8 weeks of intake of a yogurt that was fortified with vitamin K2 (as menaquinone-7, MK-7) and enriched with vitamins C and D3, magnesium and polyunsaturated fatty acids. It was hypothesized that the added nutrients contributed to this improvement. Here we report on a study in which we compared the fasting plasma concentrations of MK-7 from (a) yogurt enriched with MK-7, vitamins D3 and C, magnesium, n-3 poly unsaturated fatty acids (n-3 PUFA) and fish oil (yogurt Kplus), (b) yogurt fortified with MK-7 only (yogurt K) and (c) soft gel capsules containing only MK-7. SUBJECTS/METHODS: For 42 days, healthy men and postmenopausal women between 45 and 65 years of age daily consumed either yogurt K, yogurt Kplus or capsules. Circulating MK-7, 25-hydroxy vitamin D (25(OH)D) and markers for vitamin K status (uncarboxylated osteocalcin (ucOC) and desphospho-uncarboxylated matrix Gla-protein (dp-ucMGP)) were assessed. Plasma MK-7 was also measured during the washout period of 2 weeks. MK-7 and dp-ucMGP were measured in citrated plasma, and 25(OH)D3 and ucOC were measured in the serum. RESULTS: The increase in plasma MK-7 with the yogurt Kplus product was more pronounced than the increase in MK-7 with the capsules. Circulating dp-ucMGP and ucOC were significantly lowered after consumption of the yogurt products and the MK-7 capsules, reflecting vitamin K status improvement. No significant differences in fasting plasma concentrations of various biomarkers between the yogurts were found. CONCLUSIONS: Dairy matrix and nutrient composition may affect MK-7 delivery and improvement of vitamin K status. Yogurt fortified with MK-7 is a suitable matrix to improve the nutritional status of the fat-soluble vitamins.


Subject(s)
Diet , Dietary Fats/pharmacology , Dietary Supplements , Food, Fortified , Micronutrients/pharmacology , Vitamin K 2/analogs & derivatives , Yogurt , Ascorbic Acid/pharmacology , Biological Availability , Calcium-Binding Proteins/blood , Capsules , Cholecalciferol/pharmacology , Dairy Products , Extracellular Matrix Proteins/blood , Fasting , Fatty Acids, Omega-3/pharmacology , Female , Humans , Magnesium/pharmacology , Male , Middle Aged , Nutritional Status , Osteocalcin/blood , Postmenopause , Reference Values , Vitamin K 2/blood , Vitamin K 2/pharmacokinetics , Matrix Gla Protein
5.
J Nutr Health Aging ; 20(3): 325-33, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26892582

ABSTRACT

BACKGROUND AND AIMS: Vitamin K insufficiency is common and linked to an increased risk of cardiovascular disease and osteoporotic fractures. The aim of this study was to examine whether daily supplementation with oral vitamin K could improve vascular health and physical function in older people with established vascular disease. METHODS AND RESULTS: A double blind, randomised, placebo-controlled trial. Participants aged ≤ 70 years with a history of vascular disease were randomised to receive 6 months of daily oral 100mcg vitamin K2 (MK7 subtype) or matching placebo with outcomes measured at 0, 3 and 6 months. The primary outcome was between-group difference in endothelial function assessed using flow-mediated dilatation of the brachial artery at 6 months. Secondary outcomes included carotid-radial pulse wave velocity, augmentation index, blood pressure, carotid intima-media thickness, C-reactive protein, B-type natriuretic peptide, cholesterol and desphospho-uncarboxylated matrix Gla protein levels. Handgrip strength and the Short Physical Performance Battery assessed physical function, while postural sway was measured using a 3-dimensional force platform. RESULTS: 80 participants were randomised, mean age 77 (SD 5) years; 44/80 were male. Vitamin K levels rose in the intervention arm compared to placebo (+48 pg/ml vs -6 pg/ml, p=0.03) at 6 months. Desphospho-uncarboxylated Matrix Gla protein levels fell in the intervention group compared to placebo at 6 months (-130 [SD 117] pmol/L vs +13 [SD 180] pmol/L, p<0.001). No change was seen in endothelial function (between group difference -0.3% [95%CI -1.3 to 0.8], p=0.62). A modest, non-significant improvement in pulse wave velocity was seen in the vitamin K group (-0.8m/s [95%CI -1.8 to 0.3], p=0.15) while all other vascular and physical function outcomes unchanged. CONCLUSIONS: Six months of vitamin K2 supplementation did not improve markers of vascular health or physical function in older patients with vascular disease.


Subject(s)
Dietary Supplements , Vascular Diseases/diet therapy , Vascular Diseases/physiopathology , Vitamin K/pharmacology , Aged , Biomarkers/blood , Blood Pressure/drug effects , Brachial Artery/drug effects , Brachial Artery/physiopathology , C-Reactive Protein/analysis , Carotid Intima-Media Thickness , Cholesterol/blood , Double-Blind Method , Female , Hand Strength/physiology , Humans , Male , Natriuretic Peptide, Brain/blood , Pulse Wave Analysis , Treatment Failure , Vitamin K/administration & dosage
6.
J Hum Hypertens ; 30(7): 418-23, 2016 07.
Article in English | MEDLINE | ID: mdl-26016598

ABSTRACT

Matrix Gla protein (MGP), a natural inhibitor of calcification, strongly correlates with the extent of coronary calcification. Vitamin K is the essential cofactor for the activation of MGP. The nonphosphorylated-uncarboxylated isoform of MGP (dp-ucMGP) reflects the status of this vitamin. We investigated whether there is an association between dp-ucMGP and stiffness of elastic and muscular-type large arteries in a random sample from the general population. In a cross-sectional design, we analyzed 1087 subjects from the Czech post-MONICA study. Aortic and femoro-popliteal pulse wave velocities (PWVs) were measured using a Sphygmocor device. Dp-ucMGP concentrations were assessed in freshly frozen samples by enzyme-linked immunosorbent assay methods using the InaKtif MGP iSYS pre-commercial kit developed by IDS and VitaK. Aortic PWV significantly (P<0.0001) increased across the dp-ucMGP quartiles. After adjustment for all potential confounders, aortic PWV independently correlated with dp-ucMGP (with beta coefficient (s.d.) 11.61 (5.38) and P-value=0.031). In a categorized manner, subjects in the top quartile of dp-ucMGP (⩾ 671 pmol l(-1)) had a higher risk of elevated aortic PWV, with corresponding adjusted odds ratio (95% confidence interval) 1.73 (1.17-2.5). In contrast, no relation between dp-ucMGP and femoro-popliteal PWV was found. In conclusion, increased dp-ucMGP, which is a circulating biomarker of vitamin K status and vascular calcification, is independently associated with aortic stiffness, but not with stiffness of distal muscular-type arteries.


Subject(s)
Aortic Diseases/blood , Aortic Diseases/physiopathology , Calcium-Binding Proteins/blood , Extracellular Matrix Proteins/blood , Peripheral Arterial Disease/blood , Peripheral Arterial Disease/physiopathology , Vascular Stiffness , Adult , Aged , Aortic Diseases/diagnosis , Biomarkers/blood , Cross-Sectional Studies , Czech Republic , Enzyme-Linked Immunosorbent Assay , Female , Humans , Linear Models , Logistic Models , Male , Middle Aged , Multivariate Analysis , Odds Ratio , Peripheral Arterial Disease/diagnosis , Phosphorylation , Pulse Wave Analysis , Risk Factors , Up-Regulation , Matrix Gla Protein
7.
Rev Sci Instrum ; 86(11): 115116, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26628181

ABSTRACT

Heat switches are devices that can change from a thermally conducting (on-) state to an insulating (off-) state whenever the need arises. They enable adaptive thermal management strategies in which cooling rates are altered either spatially or temporally, leading to a substantial reduction in the energy and mass budget of a large range of systems. State-of-the-art heat switches are only rarely employed in thermal system architectures, since they are rather bulky and have a limited thermal performance (expressed as the heat transfer ratio between the on- and off-state heat conductance). Using selective laser melting additive manufacturing technology, also known as 3D printing, we developed a compact flat-panel gas-gap heat switch that offers superior thermal performance, is simpler and more economic to produce and assemble, contains no moving parts, and is more reliable because it lacks welded joints. The manufactured rectangular panel heat switch has frontal device dimensions of 10 cm by 10 cm, thickness of 3.2 mm and weighs just 121 g. An off heat conductance of 0.2 W/K and on-off heat conductance ratio of 38 is observed at 295 K.

8.
J Nutr Health Aging ; 19(9): 908-12, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26482692

ABSTRACT

OBJECTIVES: The aim of this study was to examine the association between dephospho-uncarboxylated matrix Gla protein (dp-ucMGP), an indicator of vitamin K status, and cognitive decline, and the modifying role of 25(OH)D. DESIGN: Longitudinal study with six years follow-up. SETTING: Community based. PARTICIPANTS: 599 participants of the Longitudinal Aging Study Amsterdam (aged 55-65 years). MEASUREMENTS: Information processing speed and a composite Z-score by combining three domains of cognition reflecting general cognitive functioning. RESULTS: Generalized estimating equations (GEE) showed no significant associations between dp-ucMGP and decline in general cognitive functioning. Vitamin D modified the association between dp-ucMGP and speed of information processing (p<0.05). In the group with a 25(OH)D concentration > 50 nmol/l, the highest tertile of dp-ucMGP (>406 pmol/l), which corresponds to lower vitamin K levels, was associated with 1.5 higher score on information processing speed (p=0.023) as compared to the lowest tertile of dp-ucMGP. CONCLUSION: In contrast to our hypothesis, a suboptimal vitamin K was not associated with cognitive decline in middle-aged adults.


Subject(s)
Calcium-Binding Proteins/blood , Cognition Disorders/blood , Cognition , Extracellular Matrix Proteins/blood , Nutritional Status , Vitamin K/blood , Vitamins/blood , Female , Humans , Longitudinal Studies , Male , Middle Aged , Vitamin D/analogs & derivatives , Vitamin D/blood , Vitamin K Deficiency/complications , Vitamin K Deficiency/psychology , Matrix Gla Protein
9.
Osteoarthritis Cartilage ; 23(3): 370-8, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25528106

ABSTRACT

BACKGROUND: Vitamin K-dependent (VKD) proteins, including the mineralization inhibitor matrix-gla protein (MGP), are found in joint tissues including cartilage and bone. Previous studies suggest low vitamin K status is associated with higher osteoarthritis (OA) prevalence and incidence. OBJECTIVE: To clarify what joint tissues vitamin K is relevant to in OA, we investigated the cross-sectional and longitudinal association between vitamin K status and knee OA structural features measured using magnetic resonance imaging (MRI). METHODS: Plasma phylloquinone (PK, vitamin K1) and dephosphorylated-uncarboxylated MGP ((dp)ucMGP) were measured in 791 older community-dwelling adults who had bilateral knee MRIs (mean ± SD age = 74 ± 3 y; 67% female). The adjusted odds ratios (and 95% confidence intervals) [OR (95%CI)] for presence and progression of knee OA features according to vitamin K status were calculated using marginal models with generalized estimating equations (GEEs), adjusted for age, sex, body mass index (BMI), triglycerides and other pertinent confounders. RESULTS: Longitudinally, participants with very low plasma PK (<0.2 nM) were more likely to have articular cartilage and meniscus damage progression after 3 years [OR (95% CIs): 1.7(1.0-3.0), 2.6(1.3-5.2) respectively] compared to sufficient PK (≥ 1.0 nM). Higher plasma (dp)ucMGP (reflective of lower vitamin K status) was associated with higher odds of meniscus damage, osteophytes, bone marrow lesions, and subarticular cysts cross-sectionally [ORs (95% CIs) comparing highest to lowest quartile: 1.6(1.1-2.3); 1.7(1.1-2.5); 1.9(1.3-2.8); 1.5(1.0-2.1), respectively]. CONCLUSION: Community-dwelling men and women with very low plasma PK were more likely to have progression of articular cartilage and meniscus damage. Plasma (dp)ucMGP was associated with presence of knee OA features but not progression. Future studies are needed to clarify mechanisms underlying vitamin Ks role in OA.


Subject(s)
Calcium-Binding Proteins/metabolism , Cartilage, Articular/pathology , Extracellular Matrix Proteins/metabolism , Menisci, Tibial/pathology , Osteoarthritis, Knee/metabolism , Vitamin K 1/metabolism , Vitamin K Deficiency/metabolism , Aged , Cohort Studies , Cross-Sectional Studies , Decarboxylation , Disease Progression , Female , Humans , Incidence , Longitudinal Studies , Magnetic Resonance Imaging , Male , Odds Ratio , Osteoarthritis, Knee/epidemiology , Osteoarthritis, Knee/pathology , Osteophyte/epidemiology , Osteophyte/metabolism , Osteophyte/pathology , Phosphorylation , Vitamin K Deficiency/epidemiology , Matrix Gla Protein
10.
J Thromb Haemost ; 12(7): 1028-34, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24826813

ABSTRACT

BACKGROUND: High vitamin K intake is associated with a reduced risk of coronary heart disease (CHD). This is thought to be mediated by increased activation of the vitamin K-dependent matrix γ-carboxyglutamate protein (MGP). Desphospho-uncarboxylated MGP (dp-ucMGP) is associated with both vitamin K status and vascular calcification. However, the association of dp-ucMGP with CHD and stroke in the general population has not been investigated to date. OBJECTIVE: To investigate the association of dp-ucMGP with incident CHD or stroke. METHODS: A prospective case-cohort study with a representative baseline sample of 1406 participants and 1154 and 380 incident cases of CHD and stroke, respectively, was nested within the EPIC-NL study. Circulating dp-ucMGP levels were measured with ELISA in baseline plasma samples. The incidence rates of fatal and non-fatal CHD and stroke were obtained by linkage to national registers. Cox proportional hazard models were used to calculate hazard ratios (HRs) per standard deviation (SD) and per quartile of circulating dp-ucMGP levels. RESULTS AND CONCLUSION: The average follow-up was 11.5 years. Levels of dp-ucMGP were not associated with CHD risk, with an HR per SD of 1.00 (95% confidence interval [CI] 0.93-1.07) and an HRQ4 vs. Q1 of 0.94 (95% CI 0.79-1.13) after adjustment for cardiovascular risk factors. There was no association of dp-ucMGP stroke risk (HRSD  0.98, 95% CI 0.90-1.08; and HRQ4 vs. Q1  1.09, 95% CI 0.78-1.51). This study could not confirm that high dp-ucMGP levels, reflecting poor vitamin K status, are associated with increased CHD or stroke risk in the general population.


Subject(s)
Calcium-Binding Proteins/blood , Coronary Disease/diagnosis , Extracellular Matrix Proteins/blood , Stroke/diagnosis , Vitamin K/pharmacology , Adult , Aged , Calcinosis , Case-Control Studies , Coronary Disease/blood , Enzyme-Linked Immunosorbent Assay , Female , Follow-Up Studies , Humans , Incidence , Male , Middle Aged , Proportional Hazards Models , Risk Factors , Stroke/blood , Treatment Outcome , Matrix Gla Protein
11.
Food Funct ; 5(2): 229-34, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24296867

ABSTRACT

Vitamin K's recommended dietary allowance (RDA) is based on the hepatic requirement for clotting factor synthesis, but substantial concentrations of undercarboxylated extra-hepatic Gla-proteins are found in the circulation of non-supplemented individuals. This suggests that vitamin K intake above the RDA is required for an optimal extra-hepatic vitamin K status. Circulating uncarboxylated osteocalcin (ucOC) and desphospho-uncarboxylated matrix Gla-protein (dp-ucMGP) are considered markers of the vitamin K status in bone and the vasculature, respectively. We measured these markers in 896 samples of healthy volunteers and defined target groups for vitamin K supplementation based on increased levels indicative of tissue-specific vitamin K deficiency. We studied the response to vitamin K supplements at different states of vitamin K deficiency by measuring the circulating dp-ucMGP level in samples from two short-term trials on menaquinone-7 (MK-7, vitamin K2) supplementation in 42 children and 68 adults. Children had high ucOC levels (3.4-96.9 ng ml(-1)); other age groups had values in the range of 1.5-5.0 ng ml(-1). From the age of 40 years, dp-ucMGP levels gradually increased. Children and adults with more pronounced vitamin K deficiency gave the highest responses to MK-7 supplementation. Children and adults above 40 years showed the largest tissue-specific vitamin deficiency and accordingly may benefit from MK-7 supplementation to improve their extra-hepatic vitamin K status.


Subject(s)
Vitamin K Deficiency/drug therapy , Vitamin K/administration & dosage , Vitamin K/blood , Adolescent , Adult , Aged , Aged, 80 and over , Biomarkers/blood , Calcium-Binding Proteins/blood , Child , Child, Preschool , Dietary Supplements/analysis , Extracellular Matrix Proteins/blood , Female , Healthy Volunteers , Humans , Male , Middle Aged , Osteocalcin/blood , Vitamin K Deficiency/blood , Young Adult , Matrix Gla Protein
12.
Anal Chim Acta ; 801: 22-33, 2013 Nov 01.
Article in English | MEDLINE | ID: mdl-24139571

ABSTRACT

Real-world applications will inevitably entail divergence between samples on which chemometric classifiers are trained and the unknowns requiring classification. This has long been recognized, but there is a shortage of empirical studies on which classifiers perform best in 'external validation' (EV), where the unknown samples are subject to sources of variation relative to the population used to train the classifier. Survey of 286 classification studies in analytical chemistry found only 6.6% that stated elements of variance between training and test samples. Instead, most tested classifiers using hold-outs or resampling (usually cross-validation) from the same population used in training. The present study evaluated a wide range of classifiers on NMR and mass spectra of plant and food materials, from four projects with different data properties (e.g., different numbers and prevalence of classes) and classification objectives. Use of cross-validation was found to be optimistic relative to EV on samples of different provenance to the training set (e.g., different genotypes, different growth conditions, different seasons of crop harvest). For classifier evaluations across the diverse tasks, we used ranks-based non-parametric comparisons, and permutation-based significance tests. Although latent variable methods (e.g., PLSDA) were used in 64% of the surveyed papers, they were among the less successful classifiers in EV, and orthogonal signal correction was counterproductive. Instead, the best EV performances were obtained with machine learning schemes that coped with the high dimensionality (914-1898 features). Random forests confirmed their resilience to high dimensionality, as best overall performers on the full data, despite being used in only 4.5% of the surveyed papers. Most other machine learning classifiers were improved by a feature selection filter (ReliefF), but still did not out-perform random forests.


Subject(s)
Magnetic Resonance Spectroscopy , Mass Spectrometry , Algorithms , Arabidopsis/chemistry , Arabidopsis/classification , Arabidopsis/genetics , Arabidopsis/metabolism , Biomass , Cacao/chemistry , Cacao/classification , Cacao/genetics , Cacao/metabolism , Discriminant Analysis , Metabolomics , Reproducibility of Results , Salicylic Acid/metabolism
13.
J Thromb Haemost ; 11(6): 1085-92, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23530987

ABSTRACT

BACKGROUND AND OBJECTIVE: Despite the worldwide use of vitamin K antagonists (VKAs), there is limited knowledge of the influence of dietary vitamin K on anticoagulation control. In view of the increasing nutraceutical availability of menaquinone-7 (MK-7; vitamin K2 ) and its promotion for bone and cardiovascular health, it is important to determine the posology for the interference of supplemental MK-7 with VKA therapy. PATIENTS: Eighteen healthy men and women were anticoagulated for 4 weeks with acenocoumarol, and 15 of them attained a target International Normalized Ratio (INR) of 2.0. In the six subsequent weeks, subjects were given increasing doses of MK-7 (10, 20 and 45 µg day(-1) ) while continuing acenocoumarol treatment at established individual doses. RESULTS: Apart from the INR, acenocoumarol treatment significantly increased the levels of uncarboxylated factor II (ucFII), uncarboxylated osteocalcin (ucOC), and desphospho-uncarboxylated matrix Gla-protein (dp-ucMGP), and decreased endogenous thrombin generation (ETP). A daily intake of 45 µg of MK-7 significantly decreased the group mean values of both the INR and ucFII by ~ 40%. Daily intakes of 10 and 20 µg of MK-7 were independently judged by two hematologists to cause a clinically relevant lowering of the INR in at least 40% and 60% of subjects, respectively, and to significantly increase ETP by ~ 20% and ~ 30%, respectively. Circulating ucOC and dp-ucMGP were not affected by MK-7 intake. CONCLUSIONS: MK-7 supplementation at doses as low as 10 µg (lower than the usual retail dose of 45 µg) significantly influenced anticoagulation sensitivity in some individuals. Hence, the use of MK-7 supplements needs to be avoided in patients receiving VKA therapy.


Subject(s)
Anticoagulants/administration & dosage , Anticoagulants/therapeutic use , Dietary Supplements , Vitamin K 2/analogs & derivatives , Acenocoumarol/administration & dosage , Administration, Oral , Adolescent , Adult , Anthropometry , Blood Coagulation/drug effects , Dose-Response Relationship, Drug , Drug Interactions , Female , Healthy Volunteers , Hemostatics/therapeutic use , Humans , International Normalized Ratio , Male , Middle Aged , Thrombin/chemistry , Vitamin K 2/therapeutic use , Young Adult
14.
Osteoporos Int ; 24(9): 2499-507, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23525894

ABSTRACT

UNLABELLED: We have investigated whether low-dose vitamin K2 supplements (menaquinone-7, MK-7) could beneficially affect bone health. Next to an improved vitamin K status, MK-7 supplementation significantly decreased the age-related decline in bone mineral density and bone strength. Low-dose MK-7 supplements may therefore help postmenopausal women prevent bone loss. INTRODUCTION: Despite contradictory data on vitamin K supplementation and bone health, the European Food Safety Authorities (EFSA) accepted the health claim on vitamin K's role in maintenance of normal bone. In line with EFSA's opinion, we showed that 3-year high-dose vitamin K1 (phylloquinone) and K2 (short-chain menaquinone-4) supplementation improved bone health after menopause. Because of the longer half-life and greater potency of the long-chain MK-7, we have extended these investigations by measuring the effect of low-dose MK-7 supplementation on bone health. METHODS: Healthy postmenopausal women (n = 244) received for 3 years placebo or MK-7 (180 µg MK-7/day) capsules. Bone mineral density of lumbar spine, total hip, and femoral neck was measured by DXA; bone strength indices of the femoral neck were calculated. Vertebral fracture assessment was performed by DXA and used as measure for vertebral fractures. Circulating uncarboxylated osteocalcin (ucOC) and carboxylated OC (cOC) were measured; the ucOC/cOC ratio served as marker of vitamin K status. Measurements occurred at baseline and after 1, 2, and 3 years of treatment. RESULTS: MK-7 intake significantly improved vitamin K status and decreased the age-related decline in BMC and BMD at the lumbar spine and femoral neck, but not at the total hip. Bone strength was also favorably affected by MK-7. MK-7 significantly decreased the loss in vertebral height of the lower thoracic region at the mid-site of the vertebrae. CONCLUSIONS: MK-7 supplements may help postmenopausal women to prevent bone loss. Whether these results can be extrapolated to other populations, e.g., children and men, needs further investigation.


Subject(s)
Bone Density Conservation Agents/administration & dosage , Osteoporosis, Postmenopausal/prevention & control , Vitamin K 2/analogs & derivatives , Aged , Aging/physiology , Bone Density/drug effects , Bone Density Conservation Agents/therapeutic use , Dietary Supplements , Double-Blind Method , Drug Administration Schedule , Female , Femur Neck/physiopathology , Hip Joint/physiopathology , Humans , Lumbar Vertebrae/physiopathology , Middle Aged , Osteocalcin/blood , Osteoporosis, Postmenopausal/physiopathology , Osteoporotic Fractures/prevention & control , Spinal Fractures/prevention & control , Vitamin K 2/administration & dosage , Vitamin K 2/therapeutic use
15.
Atherosclerosis ; 225(2): 397-402, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23062766

ABSTRACT

OBJECTIVE: To investigate whether menaquinone-7 (MK-7) supplementation increases carboxylation of MGP. DESIGN: A randomized, double-blind, placebo-controlled trial was performed. Sixty participants (40-65 y) were randomly allocated to supplementation of 180 µg/d, 360 µg/d of MK-7 or placebo during 12 weeks. At baseline, after 4 and 12 weeks, desphospho-uncarboxylated MGP (dp-ucMGP), desphospho-carboxylated MGP (dp-cMGP) and total uncarboxylated MGP (t-ucMGP) were measured by ELISA techniques. Furthermore, the ratio of uncarboxylated osteocalcin (ucOC) to carboxylated osteocalcin (cOC) was used as proxy of vitamin K status and various cardiovascular risk factors were measured. RESULTS: Dp-ucMGP decreased significantly and dose-dependently in the 180 µg and 360 µg MK-7 supplementation groups (P time*treatment < 0.001) after 12 weeks, by 31% and 46% respectively, while dp-ucMGP levels remained unchanged after placebo treatment. The osteocalcin ratio also decreased significantly after 12-week supplementation with 180 µg (60%) and 360 µg (74%) MK-7 (P time*treatment < 0.001), while levels remained unchanged after placebo treatment. These results indicate improved vitamin K status and good compliance to the study treatment. Changes over time of dp-cMGP (p = 0.42) and t-ucMGP (p = 0.23) levels did not differ between treatment arms. Other cardiovascular risk factors did not differ between treatments arms. CONCLUSIONS: Menaquinone supplementation dose-dependently decreases dp-ucMGP concentrations, but does not affect other MGP species. Dp-ucMGP may serve as a non-invasive marker of vitamin K status.


Subject(s)
Calcium-Binding Proteins/blood , Dietary Supplements , Extracellular Matrix Proteins/blood , Vitamin K 2/analogs & derivatives , Vitamins/administration & dosage , Adult , Aged , Biomarkers/blood , Carboxylic Acids/blood , Dose-Response Relationship, Drug , Double-Blind Method , Down-Regulation , Enzyme-Linked Immunosorbent Assay , Female , Humans , Male , Medication Adherence , Middle Aged , Netherlands , Osteocalcin/blood , Phosphorylation , Time Factors , Vitamin K 2/administration & dosage , Matrix Gla Protein
16.
J Thromb Haemost ; 9(6): 1225-35, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21435166

ABSTRACT

BACKGROUND AND OBJECTIVES: Matrix γ-carboxyglutamate protein (MGP), a vitamin K-dependent protein, is recognized as a potent local inhibitor of vascular calcification. Studying patients with Keutel syndrome (KS), a rare autosomal recessive disorder resulting from MGP mutations, provides an opportunity to investigate the functions of MGP. The purpose of this study was (i) to investigate the phenotype and the underlying MGP mutation of a newly identified KS patient, and (ii) to investigate MGP species and the effect of vitamin K supplements in KS patients. METHODS: The phenotype of a newly identified KS patient was characterized with specific attention to signs of vascular calcification. Genetic analysis of the MGP gene was performed. Circulating MGP species were quantified and the effect of vitamin K supplements on MGP carboxylation was studied. Finally, we performed immunohistochemical staining of tissues of the first KS patient originally described focusing on MGP species. RESULTS: We describe a novel homozygous MGP mutation (c.61+1G>A) in a newly identified KS patient. No signs of arterial calcification were found, in contrast to findings in MGP knockout mice. This patient is the first in whom circulating MGP species have been characterized, showing a high level of phosphorylated MGP and a low level of carboxylated MGP. Contrary to expectations, vitamin K supplements did not improve the circulating carboxylated mgp levels. phosphorylated mgp was also found to be present in the first ks patient originally described. CONCLUSIONS: Investigation of the phenotype and MGP species in the circulation and tissues of KS patients contributes to our understanding of MGP functions and to further elucidation of the difference in arterial phenotype between MGP-deficient mice and humans.


Subject(s)
Abnormalities, Multiple/drug therapy , Calcinosis/drug therapy , Calcium-Binding Proteins/drug effects , Calcium-Binding Proteins/genetics , Cartilage Diseases/drug therapy , Extracellular Matrix Proteins/drug effects , Extracellular Matrix Proteins/genetics , Hand Deformities, Congenital/drug therapy , Pulmonary Valve Stenosis/drug therapy , Vitamin K/therapeutic use , Abnormalities, Multiple/genetics , Abnormalities, Multiple/pathology , Arteries , Calcinosis/genetics , Calcinosis/pathology , Calcium-Binding Proteins/blood , Cartilage Diseases/genetics , Cartilage Diseases/pathology , Extracellular Matrix Proteins/blood , Hand Deformities, Congenital/genetics , Hand Deformities, Congenital/pathology , Homozygote , Humans , Mutation , Pulmonary Valve Stenosis/genetics , Pulmonary Valve Stenosis/pathology , Matrix Gla Protein
17.
J Intern Med ; 268(5): 483-92, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20804515

ABSTRACT

OBJECTIVE: Matrix Gla protein (MGP) is a calcification inhibitor and alterations in circulating MGP have been observed in different populations characterized by vascular calcification. We hypothesized that patients with calcific valvular aortic stenosis (AS) would have dysregulated circulating MGP levels. DESIGN AND SUBJECTS: We examined plasma levels of nonphosphorylated carboxylated and undercarboxylated MGP (dp-cMGP and dp-ucMGP, respectively) in 147 patients with symptomatic severe AS and in matched healthy controls. MAIN OUTCOME MEASURES: We further investigated the relationship between MGP levels and aortic pressure gradients and valve area by echocardiography and measures of heart failure. Finally, we assessed the prognostic value of elevated plasma dp-ucMGP level in relation to all-cause mortality in patients with AS. RESULTS: We found markedly enhanced plasma levels of dp-cMGP and in particular of dp-ucMGP in patients with symptomatic AS. Although only weak correlations were found with the degree of AS, circulating dp-ucMGP was associated with cardiac function and long-term mortality in multivariate analysis. CONCLUSIONS: A dysregulated MGP system may have a role in the development of left ventricular dysfunction in patients with symptomatic AS.


Subject(s)
Aortic Valve Stenosis/blood , Aortic Valve Stenosis/mortality , Calcium-Binding Proteins/metabolism , Extracellular Matrix Proteins/blood , Heart Failure/blood , Aged , Aged, 80 and over , Anticoagulants/therapeutic use , Aorta/diagnostic imaging , Aorta/pathology , Aortic Valve/diagnostic imaging , Aortic Valve/pathology , Aortic Valve Stenosis/drug therapy , Biomarkers/blood , Blood Pressure/physiology , Calcinosis/blood , Calcinosis/mortality , Calcium-Binding Proteins/blood , Cause of Death , Echocardiography , Female , Humans , Male , Middle Aged , Prognosis , Warfarin/therapeutic use , Matrix Gla Protein
18.
Clin Exp Rheumatol ; 26(3): 484-91, 2008.
Article in English | MEDLINE | ID: mdl-18578975

ABSTRACT

OBJECTIVE: Osteopenia is a common complication of juvenile idiopathic arthritis (JIA). In adults, low bone density and increased fracture risk are associated with low vitamin K status of bone. The vitamin K-dependent protein osteocalcin plays an important role in bone metabolism. Its activity depends upon post-translational carboxylation in which vitamin K is an essential co-factor. Hence, vitamin K deficiency leads to under-carboxylated (i.e., inactive) osteocalcin (ucOC). Little is known about the vitamin K status and bone health in children with juvenile idiopathic arthritis (JIA). We studied the vitamin K status of bone and its association with bone mass properties in children with JIA compared to healthy children. METHODS: We performed a cross sectional study in 55 children with JIA and 54 healthy controls between 6-18 years of age. Bone markers, ultrasound bone mass properties and vitamin K status of bone were determined. RESULTS: Overall, no differences in vitamin K status of bone were found between the study groups. Among children with JIA, a high ratio of ucOC/cOC indicating low vitamin K status was associated with low bone ultrasound parameters, whereas children with a high vitamin K status had markedly higher bone properties. This association was independent of physical activity, age, gender and BMI. CONCLUSION: These results suggest that vitamin K may be one of multiple risk factors for low bone mass in children with JIA, in addition to other recognized determinants of bone mass. The question remains whether JIA patients would benefit from increased dietary vitamin K intake.


Subject(s)
Arthritis, Juvenile/blood , Arthritis, Juvenile/diagnostic imaging , Bone and Bones/diagnostic imaging , Vitamin K/blood , Absorptiometry, Photon , Adolescent , Arthritis, Juvenile/complications , Biomarkers/blood , Bone Density/physiology , Bone Diseases, Metabolic/epidemiology , Bone Diseases, Metabolic/metabolism , Bone and Bones/metabolism , Bone and Bones/physiopathology , Case-Control Studies , Child , Cross-Sectional Studies , Female , Humans , Male , Osteocalcin/metabolism , Risk Factors , Ultrasonography , Vitamin K Deficiency/blood , Vitamin K Deficiency/complications
19.
Rheumatology (Oxford) ; 47(3): 267-71, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18234711

ABSTRACT

OBJECTIVES: The aims of the present study were to investigate whether the calcification inhibitor matrix Gla protein (MGP) is expressed in muscle biopsies of patients with juvenile dermatomyositis (JDM), and whether different forms of MGP are differentially expressed in JDM patients with and without subcutaneous calcifications. METHODS: Muscle tissue from six JDM patients (three without calcinosis, two with calcinosis and one recently diagnosed patient), four patients with muscular dystrophy, three patients with IBM and five normal histological control subjects was used for immunohistochemistry staining using novel antibodies to different conformations of MGP. RESULTS: In the JDM patients, all forms of MGP [non-carboxylated MGP (ucMGP), carboxylated MGP (cMGP), non-phosphorylated MGP (serMGP) and phosphorylated MGP (pserMGP)] were more intensely stained in the perifascicular compared with the central muscle fibres. In addition, these MGP species were demonstrated in the pathological muscle fibres of IBM and dystrophy patients, but hardly in normal histological muscle tissue. In JDM patients with calcifications, only pserMGP was increased compared with those without calcifications. All forms of MGP were also found in various staining intensities in the microvasculature and macrophages of normal histological and disease biopsies. CONCLUSIONS: MGP was expressed at the site of muscle damage in JDM patients as well as in patients with muscular dystrophy and IBM. The difference in staining intensity of pserMGP appeared to distinguish between JDM patients with and without calcifications, whereas cMGP, the other functional form, was equally expressed.


Subject(s)
Calcinosis/pathology , Calcium-Binding Proteins/metabolism , Dermatomyositis/pathology , Extracellular Matrix Proteins/metabolism , Vitamin K/pharmacology , Adolescent , Biomarkers/analysis , Biomarkers/metabolism , Calcinosis/etiology , Calcium-Binding Proteins/analysis , Case-Control Studies , Child , Cohort Studies , Dermatomyositis/complications , Extracellular Matrix Proteins/analysis , Female , Humans , Immunohistochemistry , Male , Muscle Cells/metabolism , Muscle Cells/pathology , Muscle, Smooth/metabolism , Muscle, Smooth/pathology , Phosphorylation/drug effects , Reference Values , Sensitivity and Specificity , Tissue Culture Techniques , Matrix Gla Protein
20.
J Thromb Haemost ; 5(12): 2503-11, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17848178

ABSTRACT

BACKGROUND: Matrix Gla protein (MGP) is a small vitamin K-dependent protein containing five gamma-carboxyglutamic acid (Gla) residues that are believed to be important in binding Ca(2+), calcium crystals and bone morphogenetic protein. In addition, MGP contains phosphorylated serine residues that may further regulate its activity. In vivo, MGP has been shown to be a potent inhibitor of vascular calcification; however, the precise molecular mechanism underlying the function of MGP is not yet fully understood. METHODS AND RESULTS: We investigated the effects of MGP in human vascular smooth muscle cell (VSMC) monolayers that undergo calcification after exposure to an increase in Ca(2+) concentration. Increased calcium salt deposition was found in cells treated with the vitamin K antagonist warfarin as compared to controls, whereas cells treated with vitamin K(1) showed decreased calcification as compared to controls. With conformation-specific antibodies, it was confirmed that warfarin treatment of VSMCs resulted in uncarboxylated (Gla-deficient) MGP. To specifically test the effects of MGP on VSMC calcification, we used full-length synthetic MGP and MGP-derived peptides representing various domains in MGP. Full length MGP, the gamma-carboxylated motif (Gla) (amino acids 35-54) and the phosphorylated serine motif (amino acids 3-15) inhibited calcification. Furthermore, we showed that the peptides were not taken up by VSMCs but bound to the cell surface and to vesicle-like structures. CONCLUSIONS: These data demonstrate that both gamma-glutamyl carboxylation and serine phosphorylation of MGP contribute to its function as a calcification inhibitor and that MGP may inhibit calcification via binding to VSMC-derived vesicles.


Subject(s)
Calcinosis/prevention & control , Calcium-Binding Proteins/metabolism , Calcium/metabolism , Extracellular Matrix Proteins/metabolism , Muscle, Smooth, Vascular/metabolism , Myocytes, Smooth Muscle/metabolism , Protein Processing, Post-Translational , 1-Carboxyglutamic Acid/metabolism , Adolescent , Adult , Amino Acid Sequence , Calcinosis/metabolism , Calcium-Binding Proteins/chemistry , Cell Membrane/metabolism , Cells, Cultured , Extracellular Matrix Proteins/chemistry , Female , Humans , Male , Middle Aged , Molecular Sequence Data , Muscle, Smooth, Vascular/drug effects , Myocytes, Smooth Muscle/drug effects , Peptide Fragments/metabolism , Phosphorylation , Protein Structure, Tertiary , Serine/metabolism , Transport Vesicles/metabolism , Vitamin K/antagonists & inhibitors , Vitamin K/metabolism , Vitamin K 1/pharmacology , Warfarin/pharmacology , Matrix Gla Protein
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