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1.
C R Biol ; 337(1): 44-52, 2014 Jan.
Article in French | MEDLINE | ID: mdl-24439550

ABSTRACT

Data on mineral elements in spirulinas being limited, we analyzed macrominerals and trace elements of samples from France and Africa. Spirulinas cultivated in France have a composition in macromineral elements similar to those of the literature. The entire contents of trace elements are low. Unlike marine cyanobacteria, they do not concentrate rare-earth elements. Spirulina harvested in Chad has high levels in macrominerals and trace elements, due to traditional drying and harvesting methods. Rare-earth element levels are attributed to this pollution and not to their concentration in spirulinas, because rare-earth element normalized profiles of spirulina are strictly parallel to those of ouadis mud and very different from those of ouadis water. Despite the sometimes high content of total As, normal water consumption in Chad presents no health problems. Spirulinas grown in Togo, Niger, Mali, Burkina-Faso and Central African Republic have chemical compositions similar to those of Chad spirulinas, but with a lower content of macromineral and trace elements, reflecting a lower mineral pollution. Rare-earth element normalized patterns dismiss an aeolian pollution and the pollution is rather of pedological origin. They show no toxicity problem except spirulinas from Burkina-Faso, whose Pb content is too high. The variability of composition of spirulinas can be largely attributed to the mineral pollution of the samples. Significant levels of rare-earth elements sometimes found in the literature reflect this pollution.


Subject(s)
Minerals/analysis , Spirulina/chemistry , Trace Elements/analysis , Africa, Northern , Burkina Faso , Central African Republic , Chad , Environmental Pollution , France , Lead/analysis , Mali , Metals, Rare Earth/analysis , Togo
2.
Phys Chem Chem Phys ; 15(41): 18235-42, 2013 Nov 07.
Article in English | MEDLINE | ID: mdl-24064912

ABSTRACT

Incorporating in a non-covalent manner lanthanide derivatives into protein crystals has shown to be of prime interest for X-ray crystallography, insofar as these versatile compounds can co-crystallize with proteins through supramolecular interactions, in addition to being strong anomalous scatterers for anomalous-based diffraction techniques. In this paper, the selective affinity of tris-dipicolinate lanthanide complexes for cationic amino-acid residues is explored, using a panel of experimental (X-ray diffraction, NMR titration) and theoretical methods that provides access to an accurate description of the interaction process.


Subject(s)
Coordination Complexes/chemistry , Lanthanoid Series Elements/chemistry , Picolinic Acids/chemistry , Proteins/chemistry , Crystallography, X-Ray , Magnetic Resonance Spectroscopy , Models, Molecular , Plant Proteins/chemistry , Plant Proteins/metabolism , Protein Structure, Tertiary , Proteins/metabolism , Urate Oxidase/chemistry , Urate Oxidase/metabolism
3.
Blood ; 116(23): 4795-805, 2010 Dec 02.
Article in English | MEDLINE | ID: mdl-20733157

ABSTRACT

This study investigated the role of the ETS transcription factor Fli-1 in adult myelopoiesis using new transgenic mice allowing inducible Fli-1 gene deletion. Fli-1 deletion in adult induced mild thrombocytopenia associated with a drastic decrease in large mature megakaryocytes number. Bone marrow bipotent megakaryocytic-erythrocytic progenitors (MEPs) increased by 50% without increase in erythrocytic and megakaryocytic common myeloid progenitor progeny, suggesting increased production from upstream stem cells. These MEPs were almost unable to generate pure colonies containing large mature megakaryocytes, but generated the same total number of colonies mainly identifiable as erythroid colonies containing a reduced number of more differentiated cells. Cytological and fluorescence-activated cell sorting analyses of MEP progeny in semisolid and liquid cultures confirmed the drastic decrease in large mature megakaryocytes but revealed a surprisingly modest (50%) reduction of CD41-positive cells indicating the persistence of a megakaryocytic commitment potential. Symmetrical increase and decrease of monocytic and granulocytic progenitors were also observed in the progeny of purified granulocytic-monocytic progenitors and common myeloid progenitors. In summary, this study indicates that Fli-1 controls several lineages commitment decisions at the stem cell, MEP, and granulocytic-monocytic progenitor levels, stimulates the proliferation of committed erythrocytic progenitors at the expense of their differentiation, and is a major regulator of late stages of megakaryocytic differentiation.


Subject(s)
Cell Differentiation/genetics , Cell Lineage/genetics , Erythrocytes/cytology , Erythropoiesis/genetics , Megakaryocytes/cytology , Proto-Oncogene Protein c-fli-1/genetics , Animals , Blotting, Western , Cell Proliferation , Cell Separation , Flow Cytometry , Gene Deletion , Hematopoietic Stem Cells/cytology , Mice , Mice, Transgenic , Myeloid Cells/cytology , Reverse Transcriptase Polymerase Chain Reaction
4.
Acta Crystallogr D Biol Crystallogr ; 66(Pt 7): 762-9, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20606256

ABSTRACT

Tris-dipicolinate lanthanide complexes were used to prepare derivative crystals of six proteins: hen egg-white lysozyme, turkey egg-white lysozyme, thaumatin from Thaumatococcus daniellii, urate oxidase from Aspergillus flavus, porcine pancreatic elastase and xylanase from Trichoderma reesei. Diffraction data were collected using either synchrotron radiation or X-rays from a laboratory source. In all cases, the complex turned out to be bound to the protein and the phases determined using the anomalous scattering of the lanthanide led to high-quality electron-density maps. The binding mode of the complex was characterized from the refined structures. The lanthanide tris-dipicolinate was found to bind through interactions between carboxylate groups of the dipicolinate ligands and hydrogen-bond donor groups of the protein. In each binding site, one enantiomeric form of the complex is selected from the racemic solution according to the specific site topology. For hen egg-white lysozyme and xylanase, derivative crystals obtained by cocrystallization belonged to a new monoclinic C2 crystal form that diffracted to high resolution.


Subject(s)
Lanthanoid Series Elements/chemistry , Proteins/chemistry , Animals , Binding Sites , Crystallography, X-Ray , Ligands , Models, Molecular , Protein Structure, Tertiary
5.
J Synchrotron Radiat ; 16(Pt 5): 658-65, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19713640

ABSTRACT

Crystal diffraction of three membrane proteins (cytochrome bc(1) complex, sarcoplasmic reticulum Ca(2+) ATPase, ADP-ATP carrier) and of one nucleoprotein complex (leucyl tRNA synthetase bound to tRNAleu, leuRS:tRNAleu) was tested at wavelengths near the X-ray K-absorption edge of phosphorus using a new set-up for soft X-ray diffraction at the beamline ID01 of the ESRF. The best result was obtained from crystals of Ca(2+) ATPase [adenosin-5'-(beta,gamma-methylene) triphosphate complex] which diffracted out to 7 A resolution. Data were recorded at a wavelength at which the real resonant scattering factor of phosphorus reaches the extreme value of -20 electron units. The positions of the four triphosphates of the monoclinic unit cell of the ATPase have been obtained from a difference Fourier synthesis based on a limited set of anomalous diffraction data.


Subject(s)
Crystallography, X-Ray/methods , Membrane Proteins/chemistry , Phosphorus/analysis , Fourier Analysis
7.
Chemphyschem ; 8(14): 2125-32, 2007 Oct 08.
Article in English | MEDLINE | ID: mdl-17847141

ABSTRACT

The linear and non-linear photophysical properties of tris-dipicolinate europium and terbium complexes (absorption, emission, lifetime, luminescence induced by two-photon absorption) are studied in the crystalline state as well as in protein derivative crystals and compared to those in solution. Upon laser irradiation at 532 nm, luminescence of terbium is induced by a two-photon antenna effect, whereas luminescence of europium results from one-photon absorption in forbidden f-f transitions. Finally, linear and two-photon microscopy imaging experiments on biological and bio-inspired crystals are performed. These first proof-of-concept experiments open the way for the development of time-resolved non-linear microscopy that should combine the advantages of lanthanide luminescence (long lifetime, sharp emission bands, insensitivity to oxygen) with those of confocal biphotonic excitation (near-IR excitation, 3D resolution and reduced photodamage).


Subject(s)
Biosensing Techniques , Lanthanoid Series Elements/pharmacology , Microscopy/methods , Biophysics/methods , Chemistry, Physical/methods , Crystallization , Europium/chemistry , Light , Magnetic Resonance Spectroscopy , Microscopy/instrumentation , Microscopy, Confocal , Photochemistry , Photons , Spectrophotometry, Infrared/methods , Spectrophotometry, Ultraviolet/methods , Terbium/chemistry , Time Factors
8.
J Synchrotron Radiat ; 12(Pt 4): 402-9, 2005 Jul.
Article in English | MEDLINE | ID: mdl-15968115

ABSTRACT

Phosphorus is an abundant element in living organisms. It is traceable by its X-ray absorption spectrum which shows a strong white line at its K-edge, comparable with that observed for the L(III) edges of rare earth ions. With purple membrane, the variation of the imaginary part of the anomalous dispersion of phosphorus is found to be close to 20 anomalous electron units. Anomalous diffraction experiments at wavelengths near the K-absorption edge of phosphorus confirm this result. The spatial distribution of lipids derived from anomalous diffraction agrees with earlier results from neutron diffraction. Test experiments on single crystals of the carrier protein using 5.76 A photons gave a first low-resolution diffraction pattern. Various techniques of crystal mounting were attempted. In addition, fluorescence measurements on a solution of threonine synthase appear to hint at a change of the phosphate environment of the cofactor upon activator binding.


Subject(s)
Mitochondrial ADP, ATP Translocases/chemistry , Phosphorus/analysis , Purple Membrane/chemistry , Spectrometry, X-Ray Emission/instrumentation , Spectrometry, X-Ray Emission/methods , X-Ray Diffraction/instrumentation , X-Ray Diffraction/methods , Carbon-Oxygen Lyases/analysis , Carbon-Oxygen Lyases/chemistry , Equipment Design , Equipment Failure Analysis , Halobacterium/chemistry , Mitochondrial ADP, ATP Translocases/analysis , Molecular Conformation , Phosphorus/chemistry , Protein Conformation
9.
Acta Crystallogr D Biol Crystallogr ; 60(Pt 8): 1506-8, 2004 Aug.
Article in English | MEDLINE | ID: mdl-15272192

ABSTRACT

Gd-HPDO3A, a neutral gadolinium complex, is a good candidate for obtaining heavy-atom-derivative crystals by the lipidic cubic phase crystallization method known to be effective for membrane proteins. Gadolinium-derivative crystals of hen egg-white lysozyme were obtained by co-crystallizing the protein with 100 mM Gd-HPDO3A in a monoolein cubic phase. Diffraction data were collected to a resolution of 1.7 A using Cu Kalpha radiation from a rotating-anode generator. Two binding sites of the gadolinium complex were located from the strong gadolinium anomalous signal. The Gd-atom positions and their refined occupancies were found to be identical to those found in derivative crystals of hen egg-white lysozyme obtained by co-crystallizing the protein with 100 mM Gd-HPDO3A using the hanging-drop technique. Moreover, the refined structures are isomorphous. The lipidic cubic phase is not disturbed by the high concentration of Gd-HPDO3A. This experiment demonstrates that a gadolinium complex, Gd-HPDO3A, can be used to obtain derivative crystals by the lipidic cubic phase crystallization method. Further studies with membrane proteins that are known to crystallize in lipidic cubic phases will be undertaken with Gd-HPDO3A and other Gd complexes to test whether derivative crystals with high Gd-site occupancies can be obtained.


Subject(s)
Gadolinium/chemistry , Lipids/chemistry , Muramidase/chemistry , Organometallic Compounds/chemistry , Animals , Chickens , Crystallization , Crystallography, X-Ray , Heterocyclic Compounds
10.
Acta Crystallogr D Biol Crystallogr ; 59(Pt 11): 1914-22, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14573945

ABSTRACT

Because of their intense white lines and large f" values, lanthanide atoms are of great interest for solving structures of biological macromolecules using single-wavelength anomalous diffraction (SAD) or multiple-wavelength anomalous diffraction (MAD) methods. In this work, a series of seven gadolinium complexes are described which provide excellent derivatives for anomalous diffraction experiments in biological systems. These highly soluble lanthanide complexes can easily be introduced into protein crystals either by soaking or by co-crystallization, without significantly affecting the crystallization conditions, by employing highly concentrated complex solutions ( approximately 100 mM). De novo phasing by the SAD method was carried out with several proteins of known as well as previously unknown structures by employing this new class of heavy-atom compounds. Diffraction data were collected either with a laboratory source, making use of the high anomalous signal (f" = 12 e(-)) of gadolinium with Cu Kalpha radiation, or with synchrotron radiation at the peak of the gadolinium L(III) absorption edge, which exhibits a strong white line (lambda = 1.711 A, f" = 28 e(-)). Using one of these gadolinium complexes, Gd-HPDO3A, the structure of a bacterial chimeric ornithine carbamoyl transferase, OTCase3630, a dodecameric protein of 450 kDa, was determined. Employed with the SAD method, these seven complexes could be of particular interest for high-throughput macromolecular crystallography.


Subject(s)
Crystallography, X-Ray/instrumentation , Crystallography, X-Ray/methods , Lanthanoid Series Elements/chemistry , Electrons , Gadolinium/chemistry , Molecular Structure , Ornithine Carbamoyltransferase/chemistry , Protein Conformation , Proteins/chemistry , Solvents
11.
Biochem Pharmacol ; 65(3): 423-33, 2003 Feb 01.
Article in English | MEDLINE | ID: mdl-12527335

ABSTRACT

Epstein-Barr virus (EBV)-associated nasopharyngeal carcinomas (NPC) are much more sensitive to chemotherapy than other head and neck carcinomas. Spectacular regressions are frequently observed after induction chemotherapy. However, these favorable responses are difficult to predict and often of short duration. So far there have been only few experiments to investigate the mechanisms which underline the cytotoxic effects of anti-neoplastic drugs against NPC cells. In addition, these studies were performed almost entirely on EBV-negative cell lines therefore not truly representative of NPC cells. For the first time, we have used two EBV-positive NPC tumor lines derived from a North African (C15) and a Chinese (C666-1) patient as in vitro targets for a panel of anti-neoplastic agents. Doxorubicin, taxol and in a lesser extent cis-platinum efficiently inhibited NPC cell proliferation at clinically relevant concentrations, but all three agents failed to induce apoptosis. However, massive apoptosis of C15 cells was achieved when doxorubicin (1 microM) was combined with a farnesyl-transferase inhibitor, BIM 2001 (5 microM). Moreover, this apoptotic process was associated with a caspase-dependent early cleavage of the TNF-receptor associated factor 1 (TRAF-1) molecule, a signaling adaptor which is specifically expressed in latently EBV-infected cells. TRAF-1 cleavage might become a useful indicator of chemo-induced apoptosis in EBV-associated NPCs.


Subject(s)
Apoptosis , Doxorubicin/pharmacology , Enzyme Inhibitors/pharmacology , Heterocyclic Compounds, 3-Ring/pharmacology , Nasopharyngeal Neoplasms/pathology , Nitriles/pharmacology , Proteins/metabolism , Alkyl and Aryl Transferases/antagonists & inhibitors , Cell Division/drug effects , Drug Combinations , Farnesyltranstransferase , Female , Herpesvirus 4, Human/isolation & purification , Humans , Nasopharyngeal Neoplasms/metabolism , Nasopharyngeal Neoplasms/virology , TNF Receptor-Associated Factor 1 , Tumor Cells, Cultured
12.
Acta Crystallogr D Biol Crystallogr ; 58(Pt 1): 1-9, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11752774

ABSTRACT

A neutral gadolinium complex, Gd-HPDO3A, is shown to be a good candidate to use to obtain heavy-atom derivatives and solve macromolecular structures using anomalous dispersion. Tetragonal crystals of a gadolinium derivative of hen egg-white lysozyme were obtained by co-crystallization using different concentrations of the complex. Diffraction data from three derivative crystals (100, 50 and 10 mM) were collected to a resolution of 1.7 A using Cu Kalpha radiation from a rotating anode. Two strong binding sites of the gadolinium complex to the protein were located from the gadolinium anomalous signal in both the 100 and 50 mM derivatives. A single site is occupied in the 10 mM derivative. Phasing using the anomalous signal at a single wavelength (SAD method) leads to an electron-density map of high quality. The structure of the 100 mM derivative has been refined. Two molecules of the gadolinium complex are close together. Both molecules are located close to tryptophan residues. Four chloride ions were found. The exceptional quality of the SAD electron-density map, only enhanced by solvent flattening, suggests that single-wavelength anomalous scattering with the Gd-HPDO3A complex may be sufficient to solve protein structures of high molecular weight by synchrotron-radiation experiments, if not by laboratory experiments.


Subject(s)
Heterocyclic Compounds/chemistry , Muramidase/chemistry , Organometallic Compounds/chemistry , Animals , Chickens , Crystallography, X-Ray , Egg White , Gadolinium , Heterocyclic Compounds/metabolism , Models, Molecular , Molecular Structure , Muramidase/metabolism , Organometallic Compounds/metabolism , Protein Binding
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