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1.
HLA ; 91(3): 212-213, 2018 03.
Article in English | MEDLINE | ID: mdl-29356391

ABSTRACT

HLA-C*05:156 allele differs from C*05:01:01:02 by a nucleotide change in exon 2 at codon 9.


Subject(s)
Alleles , HLA-C Antigens/genetics , Sequence Analysis, DNA , Base Sequence , Exons/genetics , Hemizygote , Histocompatibility Testing , Humans
2.
Tissue Antigens ; 84(5): 471-8, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25329633

ABSTRACT

The prevalence of celiac disease (CD) in patients with type 1 diabetes (T1D) has been reported to be 5-7 times higher than in the general population. Risk factors for co-occurrence of both diseases have not been entirely established. The aim of our study was to analyze possible impact of human leukocyte antigen (HLA) class I and killer cell immunoglobulin-like receptors (KIRs) on the co-occurrence of T1D and CD. We analyzed 67 patients with T1D, 68 patients with CD, 69 patients with both diseases (T1D+CD) and 130 controls. Statistical analysis was based on two tailed Fisher exact test with corrections for multiple testing. After stratification by DR3-DQ2, an association of HLA class I part of the COX haplotype (A1-B8-Cw7-DR3-DQ2) was not observed with each of the studied diseases separately, but it could be shown in case of the co-occurrence of T1D and CD. Only in the group of patients with coexisting diseases, the presence of HLA-C*07 (P = 8.65×10(-3) ) and HLA-B*08 (P = 0.03) but not HLA-A*01 increased the succeptibility. Our current data indicated that C*07, contributing C1 ligand (Pc = 3.67×10(-5) ) rather than B*08, that possesses no KIR ligand, could have an impact on the innate immunity rout of this susceptibility. The significant combination of C1-KIR2DL3 (Pc = 1.97×10(-4) ) observed in patients with coexisting diseases supports this hypotesis. Interestingly, no association was observed when C1 in combination with its stronger inhibitory receptor KIR2DL2 was investigated. Predominantly, weak inhibition in patients with coexisting T1D and CD could lead to a natural killer cell response, making them vulnerable for developing more than one autoimmune disease.


Subject(s)
Celiac Disease , Diabetes Mellitus, Type 1 , Genetic Predisposition to Disease , HLA-C Antigens/genetics , Receptors, KIR2DL2/genetics , Receptors, KIR2DL3/genetics , Celiac Disease/epidemiology , Comorbidity , Diabetes Mellitus, Type 1/epidemiology , Diabetes Mellitus, Type 1/genetics , Female , Humans , Male , Prevalence
3.
Tissue Antigens ; 84(5): 459-64, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25209151

ABSTRACT

Within the framework of the EU-funded HLA-NET action, an analysis of three G-group alleles, HLA-B*44:02:01G, DRB1*14:01:01G and DQB1*03:01:01G, was undertaken in 12 European populations. Ambiguities were resolved by polymerase chain reaction-sequence-specific amplification (PCR-SSP) or PCR-sequence-based typing (PCR-SBT) in a total of 5095 individuals. The results of the DRB1*14:01/14:54 ambiguity showed high relative ratios (24-53%) of DRB1*14:01 in Bulgarians, Croatians, Greeks, Italians and Slovenians, contrasting with low ratios (6-13%) in Austrians, Finnish, French, Hungarians, Norwegians and Swiss. Resolution of the B*44:02/44:27 ambiguity showed that B*44:27 had a high relative ratio in Slovenians (25.5%) and Bulgarians (37%) and low in French and Swiss (0.02-1%), and was not observed in Greeks and Italians. The highest relative ratio of DQB1*03:19 was found in Portuguese (11%), by contrast with low ratios (0-3%) in the other five populations. Analysis of the A, B, DRB1 phenotypes and family-derived haplotypes in 1719 and 403 individuals positive for either HLA-B*44:02G or DRB1*14:01G ambiguities, respectively, showed some preferential associations, such as A*26∼DRB1*14:01, B*35∼DRB1*14:01, B*38∼DRB1*14:01 and B*44:27∼DRB1*16. Because these ambiguities are located outside the peptide-binding site, they may not be recognized by alloreactive T-cells. However, because of strong linkage disequilibrium (LD), the DRB1*14:01 vs DRB1*14:54 and the B*44:02 vs B*44:27 mismatches are associated to DRB3-, and C-mismatches, respectively. These results are informative for algorithms searching unrelated hematopoietic stem cell donors. For B*44:27-positive patients, searches are expected to be more successful when requesting donors from Southeastern-European ancestry. Furthermore, the introduction of human leukocyte antigen (HLA)-typing strategies that allow resolving exon 4 (for class I) and exon 3 (for class II) polymorphisms can be expected to contribute significantly to population genetics studies.


Subject(s)
Alleles , Gene Frequency , Genetic Variation , HLA-B Antigens/genetics , HLA-DRB1 Chains/genetics , Donor Selection , Europe , Female , Hematopoietic Stem Cell Transplantation , Humans , Living Donors , Male
4.
Int J Immunogenet ; 40(1): 21-30, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23280239

ABSTRACT

We present here the results of the Analysis of HLA Population Data (AHPD) project of the 16th International HLA and Immunogenetics Workshop (16IHIW) held in Liverpool in May-June 2012. Thanks to the collaboration of 25 laboratories from 18 different countries, HLA genotypic data for 59 new population samples (either well-defined populations or donor registry samples) were gathered and 55 were analysed statistically following HLA-NET recommendations. The new data included, among others, large sets of well-defined populations from north-east Europe and West Asia, as well as many donor registry data from European countries. The Gene[rate] computer tools were combined to create a Gene[rate] computer pipeline to automatically (i) estimate allele frequencies by an expectation-maximization algorithm accommodating ambiguities, (ii) estimate heterozygosity, (iii) test for Hardy-Weinberg equilibrium (HWE), (iv) test for selective neutrality, (v) generate frequency graphs and summary statistics for each sample at each locus and (vi) plot multidimensional scaling (MDS) analyses comparing the new samples with previous IHIW data. Intrapopulation analyses show that HWE is rarely rejected, while neutrality tests often indicate a significant excess of heterozygotes compared with neutral expectations. The comparison of the 16IHIW AHPD data with data collected during previous workshops (12th-15th) shows that geography is an excellent predictor of HLA genetic differentiations for HLA-A, -B and -DRB1 loci but not for HLA-DQ, whose patterns are probably more influenced by natural selection. In Europe, HLA genetic variation clearly follows a north to south-east axis despite a low level of differentiation between European, North African and West Asian populations. Pacific populations are genetically close to Austronesian-speaking South-East Asian and Taiwanese populations, in agreement with current theories on the peopling of Oceania. Thanks to this project, HLA genetic variation is more clearly defined worldwide and better interpreted in relation to human peopling history and HLA molecular evolution.


Subject(s)
HLA-DP Antigens/genetics , HLA-DQ Antigens/genetics , HLA-DRB1 Chains/genetics , Asia , Ethnicity , Europe , Gene Frequency , Genetic Variation , Genetics, Population , Genotype , Haplotypes , Humans , Oceania , Population Groups
5.
Int J Immunogenet ; 39(6): 459-72; quiz 473-6, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22533604

ABSTRACT

HLA-NET (a European COST Action) aims at networking researchers working in bone marrow transplantation, epidemiology and population genetics to improve the molecular characterization of the HLA genetic diversity of human populations, with an expected strong impact on both public health and fundamental research. Such improvements involve finding consensual strategies to characterize human populations and samples and report HLA molecular typings and ambiguities; proposing user-friendly access to databases and computer tools and defining minimal requirements related to ethical aspects. The overall outcome is the provision of population genetic characterizations and comparisons in a standard way by all interested laboratories. This article reports the recommendations of four working groups (WG1-4) of the HLA-NET network at the mid-term of its activities. WG1 (Population definitions and sampling strategies for population genetics' analyses) recommends avoiding outdated racial classifications and population names (e.g. 'Caucasian') and using instead geographic and/or cultural (e.g. linguistic) criteria to describe human populations (e.g. 'pan-European'). A standard 'HLA-NET POPULATION DATA QUESTIONNAIRE' has been finalized and is available for the whole HLA community. WG2 (HLA typing standards for population genetics analyses) recommends retaining maximal information when reporting HLA typing results. Rather than using the National Marrow Donor Program coding system, all ambiguities should be provided by listing all allele pairs required to explain each genotype, according to the formats proposed in 'HLA-NET GUIDELINES FOR REPORTING HLA TYPINGS'. The group also suggests taking into account a preliminary list of alleles defined by polymorphisms outside the peptide-binding sites that may affect population genetic statistics because of significant frequencies. WG3 (Bioinformatic strategies for HLA population data storage and analysis) recommends the use of programs capable of dealing with ambiguous data, such as the 'gene[rate]' computer tools to estimate frequencies, test for Hardy-Weinberg equilibrium and selective neutrality on data containing any number and kind of ambiguities. WG4 (Ethical issues) proposes to adopt thorough general principles for any HLA population study to ensure that it conforms to (inter)national legislation or recommendations/guidelines. All HLA-NET guidelines and tools are available through its website http://hla-net.eu.


Subject(s)
Epidemiology , Genetics, Population , HLA Antigens/genetics , Histocompatibility Testing/methods , Histocompatibility/genetics , Transplantation , Alleles , Computational Biology , Gene Frequency/genetics , Guidelines as Topic , Histocompatibility Testing/standards , Humans , Statistics as Topic
6.
Transplant Proc ; 42(10): 4043-6, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21168622

ABSTRACT

INTRODUCTION: An elevated serum concentration of soluble the form of CD30 (sCD30), an activation marker of mainly T(H)2-type cytokines producing T lymphocytes, has been reported as a predictive factor for acute cellular rejection episodes and poor graft outcomes in kidney transplantation. This historic cohort study investigated the association of a pretransplant sCD30 serum concentrations with kidney graft function and graft survival 3 years posttransplantation in adult recipients of deceased donor kidney grafts, treated with monoclonal anti-CD25 antibodies as an induction treatment combined with a cyclosporine (CsA)-based maintenance triple therapy. MATERIALS AND METHODS: The pretransplant sera of 296 recipients were tested for sCD30 content using a microsphere flow-cytometry assay. The estimated glomerular filtration rate (eGFR) was determined by the 4-variable Modification of Diet in Renal Disease equation. The incidences of graft loss were calculated with the use of Kaplan-Meier survival analysis and compared using the log-rank test. RESULTS: According to the distribution of the pretransplant sCD30 levels concentration ≥2700 pg/mL was defined as high (n = 146) and concentration <2700 pg/mL as low (n = 150). Three years posttransplantation, the eGFR was not significantly different in the recipients in high and low sCD30 groups (65 ± 24 vs 67 ± 21 mL/min/1.73 m(2); P = .43); there was no association between the eGFR 3 years after transplantation and the pretransplant sCD30 levels (r(2) = 0.002; P = .49). Graft survival 3 years after transplantation was also not different in the recipients in high and low sCD30 groups (P = .52). CONCLUSION: In our adult deceased-donor kidney graft recipients, the pretransplant sCD30 serum concentration was not a predictive factor of immunologic risk associated with the kidney graft function 3 years posttransplantation; neither did it affect graft survival 3 years after transplantation. The immunosuppression with anti-CD25 antibodies as an induction treatment combined with the CsA-based maintenance triple therapy could possibly be decisive for our findings.


Subject(s)
Graft Survival , Ki-1 Antigen/blood , Kidney Transplantation , Adult , Antibodies, Monoclonal/administration & dosage , Cohort Studies , Cyclosporine/administration & dosage , Female , Flow Cytometry , Glomerular Filtration Rate , Humans , Male , Middle Aged , Survival Analysis
7.
Tissue Antigens ; 76(3): 208-15, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20492597

ABSTRACT

Celiac disease (CD) is more common in individuals with insulin dependent diabetes mellitus (T1D) than in the general population. HLA class II molecules DQ8 (DQB1*0302-DQA1*0301) and DQ2 (DQB1*0201-DQA1*0501) have been identified as key genetic risk factors in both diseases. While DQ8 conveys a higher risk for T1D, DQ2 is more frequent in CD. Less is known about the contribution of HLA class I. The gut immune system has been implicated in the pathogenesis of both diseases. The MICA, which is mainly expressed in the gastrointestinal epithelium and recognized by gammadeltaT lymphocytes and natural killer (NK) cells via the NKG2D, might play a role. The aim of our study was to identify possible HLA class I and MICA alleles and conserved extended haplotypes as risk factors for the development of CD in T1D. Three groups consisting of 37 individuals with T1D and CD, 67 individuals with only T1D and 70 controls were analyzed. HLA class I and MICA alleles were determined using Luminex technology. An occurrence of CD in individuals with T1D was most significantly associated with B*08 (P = 7.3 x 10(-13)), contributing more than any of the HLA class II alleles (DRB1*0301, P = 5.00 x 10(-10); DQB1*0201, P = 7.65 x 10(-8)). Moreover, the association with CD became stronger when B*08(B*08-DQA*0501-DQB1*0201-DRB1*0301, P = 5.07 x 10(-12)) was present in the DRB1*0301-DQB1*0201-DQA1*0501 (P = 5.00 x 10(-10)) extended haplotype. We suggest a combined influence of alleles present in the MICA*008-B*08-A1-DR3-DQ2 extended haplotype on the development of CD in Slovenian individuals with T1D, where B*08 or/and a gene located close to it may play an important role, independently of HLA class II.


Subject(s)
Celiac Disease/genetics , Diabetes Mellitus, Type 1/genetics , HLA-A Antigens/genetics , HLA-B Antigens/genetics , HLA-DQ Antigens/genetics , HLA-DR Antigens/genetics , Histocompatibility Antigens Class I/genetics , Alleles , Celiac Disease/etiology , Diabetes Mellitus, Type 1/complications , Genetic Predisposition to Disease , Humans , Polymorphism, Genetic , Slovenia
8.
Bone Marrow Transplant ; 44(4): 227-35, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19234509

ABSTRACT

Various polymorphisms of non-HLA genes have recently been investigated as candidate risk factors in allogeneic haematopoietic SCT (aHSCT). Our study aimed at exploring possible associations of IL6 and CCL2 single nucleotide polymorphisms (SNP) with aHSCT outcome. A total of 166 HLA-identical aHSCT pairs recruited in were genotyped for IL6 -174 G/C, IL6 -597 G/A, CCL2 -2518 A/G and CCL2 -2076 A/T SNPs by PCR with sequence-specific primers (PCR-SSP). The association between IL6 -174 GG genotype and increased risk of acute GVHD was found in whole study group (P=0.03) and in the subgroup of related aHSCT (P=0.01), association between IL6 -597 GG genotype and the occurrence of acute GVHD was detected only in the related aHSCT pairs (P=0.02). Furthermore, reduction in OS was revealed among recipients possessing IL6 -174(*)G allele in the group of related aHSCT pairs (P=0.04). Presence of CCL2 -2076 TT genotype was associated with decrease of OS (P=0.04) and increase of TRM (P=0.02) in patients transplanted by related donor. These results, in the context of previous findings, suggest that IL6 gene polymorphisms may be associated with aHSCT outcome, particularly in patients transplanted from a related donor.


Subject(s)
Chemokine CCL2/genetics , Graft vs Host Disease/genetics , Hematopoietic Stem Cell Transplantation , Interleukin-6/genetics , Polymorphism, Single Nucleotide/genetics , Adolescent , Adult , Chemokine CCL2/immunology , Female , Genotype , Graft vs Host Disease/immunology , HLA Antigens/genetics , HLA Antigens/immunology , Humans , Interleukin-6/immunology , Male , Middle Aged , Tissue Donors , Transplantation Conditioning , Young Adult
9.
Transplant Proc ; 40(5): 1357-61, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18589105

ABSTRACT

Elevated serum concentrations of soluble CD30 molecule (sCD30) have been related to acute cellular rejection and poor graft outcomes in kidney transplantation. This historical cohort study investigated the association of pretransplant sCD30 serum concentrations with kidney graft function expressed as estimated glomerular filtration rate (GFR) at 3 years after transplantation. Pretransplant sera from 176 adult deceased-donor kidney graft recipients were tested for sCD30 content using a commercially available automated enzyme-linked immunosorbent assay. The immunosuppression consisted of induction therapy with monoclonal anti-CD25 antibodies and a maintenance regimen of cyclosporine (CsA)-based therapy. GFR was estimated (eGFR) by the four-variable Modification of Diet in Renal Disease (MDRD) Study equation. According to the distribution of pretransplant sCD30 levels (median 66.7 U/mL; interquartile range, 46.6 to 98.6 U/mL), a concentration of 66 U/mL or higher was defined as high (n = 89) and below 66 U/mL as low (n = 87). Three years after transplantation, eGFR was not significantly different among recipients in high versus low sCD30 groups (69 +/- 23 mL/min/1.73m2 vs 66 +/- 21 mL/min/1.73m2; P = .327) and there was no correlation between eGFR and pretransplant sCD30 levels (r2 = 0.001; P = .73). Upon multivariate regression analysis, donor age, recipient body mass index at transplantation, and acute rejection episodes were independent variables affecting eGFR at 3 years after transplantation. This study showed that pretransplant sCD30 serum concentrations were not associated with deceased-donor kidney graft function at 3 years after transplantation. The immunosuppression with anti-CD25 antibodies and a triple CsA-based maintenance regimen could possibly be decisive for our findings.


Subject(s)
Ki-1 Antigen/blood , Kidney Transplantation/physiology , Adolescent , Adult , Antigens, CD/blood , Antigens, CD/immunology , Cadaver , Female , Follow-Up Studies , Graft Survival , Humans , Ki-1 Antigen/immunology , Kidney Transplantation/mortality , Male , Middle Aged , Reoperation/statistics & numerical data , Retrospective Studies , Survival Analysis , T-Lymphocytes/immunology , Time Factors , Tissue Donors
10.
Clin Genet ; 71(4): 350-3, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17470136

ABSTRACT

A 47-year-old white male patient who manifested biochemical evidence of iron overload was found not to be a carrier of the three most common mutations, C282Y, H63D and S65C, of the HFE gene. Sequencing of the patient's entire HFE-coding region revealed a presence of a previously undescribed frameshift deletion c.471del in exon 3 resulting in a premature termination of a nonsense HFE protein. Interestingly, the patient was a homozygous carrier of this novel mutation and his hemochromatosis phenotype can be explained by the fact that he has no intact HFE protein. To the best of our knowledge, this is the first description of a complete loss of function of the HFE gene because of a homozygous mutation. The patient's son was found to be a heterozygous carrier of the mutation and has so far exhibited no indications of iron overload. Similarly, A*02-B*40/A*02-B*40 homozygous human leukocyte antigen (HLA) genotype was determined in the patient and heterozygous A*02-B*40/A*03-B*35 HLA genotype in his son. Thus, the novel HFE frameshift deletion c.471del was linked to the HLA-A*02-B*40 haplotype.


Subject(s)
Hemochromatosis/genetics , Histocompatibility Antigens Class I/genetics , Membrane Proteins/genetics , Sequence Deletion , Base Sequence , Cloning, Molecular , DNA Mutational Analysis , DNA Primers/genetics , Genotype , Haplotypes , Hemochromatosis/immunology , Hemochromatosis Protein , Histocompatibility Testing , Homozygote , Humans , Male , Middle Aged , Phenotype
12.
Int J Immunogenet ; 33(5): 371-3, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16984282

ABSTRACT

A novel allele HLA-B*2730 and the haplotype HLA-A*03-B*2730-Cw*02-DRB1*16-DRB5 have been found in a Slovene patient and his mother. The exon 2 sequence is identical to that of HLA-B*2702, and the exon 3 sequence is identical to that of HLA-B*2719. A possible mechanism for the generation of B*2730 is a gene conversion event.


Subject(s)
Glomerulonephritis, IGA/genetics , HLA-B Antigens/genetics , Adult , Alleles , Amino Acid Sequence , Female , Glomerulonephritis, IGA/surgery , HLA-B27 Antigen , Haplotypes , Histocompatibility Testing , Homozygote , Humans , Male , Molecular Sequence Data , Sequence Alignment , Transplantation Immunology , Waiting Lists
13.
Transfus Med ; 15(3): 197-207, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15943704

ABSTRACT

PRNP has been the most informative marker for the predisposition to variant Creutzfeld-Jakob disease (vCJD). All victims of the vCJD carried methionine (M) at the position 129 of the PrP. Prions could travel through the immune system to get from the gut to the brain, and human leucocyte antigens (HLAs) could be involved in this carriage, with HLA-DQ7 being less efficient. Contradictory reports have raised the question of the influence of sampling in population studies. We developed a fast and reliable real-time polymerase chain reaction for codon 129 single nucleotide polymorphism (SNP) using TaqMan technology, which overcomes the main drawbacks of other methods and analysed Slovenian population (n = 97). The comparison with other populations served for the estimation of the genetic risk for the development of vCJD in Slovenians. The frequencies at the codon 129 SNP in the Slovenian population were 43.3% M, 45.4% M/V 11.3% V. Considerable differences between the DQ7 frequencies in diverse samples from the same population can be seen, especially when compared to Slovenian population. This could be because of the diverse criteria for including subjects into the study and the sampling of geographically distinct subpopulations. Analysing the adequacy of HLA-DQ7 as a possible predictive factor for developing Creutzfeld-Jakob disease (CJD) by case - control studies could be improved with exact and equal sampling of groups of patients and controls. CJD genetic risk factors in the Slovenians were not found significantly different than those in British.


Subject(s)
Codon/genetics , Creutzfeldt-Jakob Syndrome/genetics , HLA-DQ Antigens/genetics , Polymorphism, Single Nucleotide , Prions/genetics , Genetic Markers , Genetic Predisposition to Disease , Humans , Slovenia
14.
Eur J Immunogenet ; 30(3): 223-7, 2003 Jun.
Article in English | MEDLINE | ID: mdl-12787001

ABSTRACT

A combination of specific HLA class II antigens and the presence of type 1 diabetes (T1D)-related antibodies has a high positive predictive value for T1D but low sensitivity. The aim of the present study was to determine the frequencies of HLA-DRB-DQB deduced haplotypes associated with susceptibility and protection in Slovenian patients with established T1D, to evaluate the relationship between the HLA-DRB1-QBP-DQB1 haplotypes and the presence of insulin autoantibodies (IAA) and glutamic acid decarboxylase antibodies (GADA), and to access the possible impact of polymorphic QBP promoters on this relationship. A cohort of 135 patients with T1D (age 17.5 +/- 7.0 years, duration of T1D 9.14 +/- 6.3 years) was investigated. HLA-DRB1 and DQB1 alleles were typed using the polymerase chain reaction (PCR)-reverse line blot method. QBP promoter region alleles were determined using PCR-sequence-specific oligonucleotide hybridization (SSO) and PCR-sequence-specific primers (SSP). IAA and GADA antibodies were determined by enzyme-linked immunosorbent assay (ELISA). The chi-square test with Yates' correction was used for statistical analysis. Deduced haplotypes DRB1*0301-DQB1*0201 (P = 0.0001, OR = 3.4), DRB1*0401-DQB1*0302 (P = 0.0001, OR = 29.8), and DRB1*0402-DQB1*0302 (P = 0.008, OR = 4.7) were significantly more common, and DRB1*1501-DQB1*0602 (P = 0.0001, OR = 0.03) significantly less common in the investigated cohort than in a Slovenian control group. The highest risk and the strongest protective HLA-DR-DQ haplotypes found in Slovenian patients with T1D did not differ from those found in other Caucasian populations. While the DRB1*0301-QBP2.1-DQB1*0201 haplotype, where QBP2.1 did not help to further distinguish DQB1*0201-possessing haplotypes in IAA-positive and IAA-negative patients, was strongly associated with the presence of IAA, the DRB1*0101-QBP5.12-DQB1*0501 haplotype, although not protective compared to the control population, was associated with an absence of IAA in the investigated cohort. It is suggested that there may be a combined influence of the QBP5.12 promoter and the DQB1*0501 functional molecule on reduced IAA production.


Subject(s)
Diabetes Mellitus, Type 1/genetics , Diabetes Mellitus, Type 1/immunology , HLA-DQ Antigens/genetics , HLA-DR Antigens/genetics , Polymorphism, Genetic , Adolescent , Adult , Antibodies/immunology , Autoantibodies/blood , Case-Control Studies , Child , Child, Preschool , Gene Frequency , Genetic Predisposition to Disease , Glutamate Decarboxylase/immunology , HLA-DQ Antigens/immunology , HLA-DQ beta-Chains , HLA-DR Antigens/immunology , HLA-DRB1 Chains , Humans , Insulin/immunology , Slovenia , White People/genetics
15.
Rheumatology (Oxford) ; 41(3): 305-11, 2002 Mar.
Article in English | MEDLINE | ID: mdl-11934968

ABSTRACT

OBJECTIVE: To analyse the influence of HLA-DR, DQ and corresponding DQA1 and DQB1 promoter alleles (QAP and QBP) on the anti-Ro alone autoantibody response in systemic lupus erythematosus (SLE). METHODS: Sixty-five unrelated anti-La antibody-negative SLE patients, 37 of them with and 28 without anti-Ro antibodies, were included. Anti-Ro antibodies were determined by both counter-immunoelectrophoresis and enzyme-linked immunosorbent assay. Seventy-four healthy individuals were selected as controls. The patients and controls were analysed for HLA-DRB1, QAP, DQA1, QBP and DQB1 alleles by DNA typing. The allelic frequencies of anti-Ro alone-positive and anti-Ro-negative SLE patients and healthy controls were compared using the chi(2) test or Fisher's exact test as appropriate. RESULTS: The DQB1*0202 allele showed a significant positive correlation with anti-Ro alone antibodies [odds ratio (OR)=16.949, P=0.0015, corrected P=0.018], while the QBP5.11 allele and the combination of DQB1*0301 and its promoter QBP3.1 were under-represented in anti-Ro-alone-positive SLE patients (P=0.01, corrected P=0.048 and corrected P=0.048 respectively). CONCLUSIONS: The above-mentioned alleles may contribute to the presence or absence of anti-Ro alone autoantibodies in SLE patients.


Subject(s)
Autoantigens/immunology , HLA-DQ Antigens/genetics , Lupus Erythematosus, Systemic/genetics , Lupus Erythematosus, Systemic/immunology , Polymorphism, Genetic/genetics , Promoter Regions, Genetic , RNA, Small Cytoplasmic , Ribonucleoproteins/immunology , Adult , Cohort Studies , DNA/analysis , Female , Genetic Carrier Screening , HLA-DQ Antigens/blood , HLA-DQ alpha-Chains , HLA-DQ beta-Chains , HLA-DR Antigens/blood , HLA-DR Antigens/genetics , HLA-DRB1 Chains , Haplotypes , Humans , Phenotype
16.
Pflugers Arch ; 440(5 Suppl): R188-9, 2000.
Article in English | MEDLINE | ID: mdl-11005666

ABSTRACT

The variability in the immune response modulated by HLA alleles may be an important factor for the induction of the protective effect of HBsAg vaccines. We present here the analysis of HLA-DRB1, DQB1 and DQA1 alleles and their combinations in the group of 36 individuals with poor humoral immmune response to HBsAg vaccination. Comparison with the control group, consisted of 60 randomly choosen healthy subjects, revealed that the DRB1*1601, DQB1*0502, DQA1*0102 haplotype is overrepresented in the group of hyporesponders and may therefore be regarded as a factor influencing poor antibody responsiveness. We observed that after revaccination two of three individuals who failed to develop anti-HBs antibodies carry the same phenotype DRB1*0101,DRB1*0301;DQB1*0501,DQB1*0201;DQA1+ ++*0101,DQA1*0501, which supports the conjecture that immunogenicity of the HBsAg vaccine depends on specific combination of HLA DR and DQ molecules on antigen presenting cells.


Subject(s)
Hepatitis B Surface Antigens/therapeutic use , Histocompatibility Antigens Class II/immunology , Vaccination , Alleles , Antibody Formation , Gene Frequency , HLA-DQ Antigens/genetics , HLA-DQ alpha-Chains , HLA-DQ beta-Chains , HLA-DR Antigens/genetics , HLA-DRB1 Chains , Haplotypes , Histocompatibility Antigens Class II/genetics , Humans
17.
Pflugers Arch ; 439(3 Suppl): R60-2, 2000.
Article in English | MEDLINE | ID: mdl-10653144

ABSTRACT

Studies both in spontaneously hypertensive rats and in humans have suggested that genes within or near to the HLA complex on chromosome 6p may be associated and linked to the regulation of blood pressure. The aim of this study was to determine whether HLA alleles and their combinations contribute to increased blood pressure, as well as to identify chromosome region that may contain genes involved in the pathogenesis of essential hypertension. Our results suggest that presence of HLA-DRB1*0101/2 DQB1*0501/2 DQA1*0102 allelic combination represents risk factor for development of essential hypertension in Slovenians, while the risk is decreased in individuals possessing HLA-DRB1*1601/2 DQB1*0502 DQA1*0102 or DRB3*. The linkage study indicates a possibility that at least one of the genes responsible for increased blood pressure is located near or within the HLA complex. A possible candidate is human endotelin-1 gene encoding a highly potent vasoactive peptide.


Subject(s)
Chromosome Mapping , Chromosomes, Human, Pair 6/genetics , Genetic Predisposition to Disease , Hypertension/genetics , Major Histocompatibility Complex/genetics , Adolescent , Gene Frequency , Genetic Linkage , Histocompatibility Antigens Class I/genetics , Histocompatibility Antigens Class II/genetics , Humans , Polymerase Chain Reaction
18.
Pflugers Arch ; 439(Suppl 1): r060-r062, 2000 Jan.
Article in English | MEDLINE | ID: mdl-28176075

ABSTRACT

Studies both in spontaneously hypertensive rats and in humans have suggested that genes within or near to the HLA complex on chromosome 6p may be associated and linked to the regulation of blood pressure. The aim of this study was to determine whether HLA alleles and their combinations contribute to increased blood pressure, as well as to identify chromosome region that may contain genes involved in the pathogenesis of essential hypertension. Our results suggest that presence of HLA-DRB1*0101/2 DQB1*0501/2 DQA1*0102 allelic combination represents risk factor for development of essential hypertension in Slovenians, while the risk is decreased in individuals possessing HLA-DRB1*1601/2 DQB1*0502 DQA1*0102 or DRB3*. The linkage study indicates a possibility that at least one of the genes responsible for increased blood pressure is located near or within the HLA complex. A possible candidate is human endotelin-1 gene encoding a highly potent vasoactive peptide.

20.
Eur J Endocrinol ; 141(2): 132-9, 1999 Aug.
Article in English | MEDLINE | ID: mdl-10427156

ABSTRACT

OBJECTIVE: To study the incidence of 21-hydroxylase deficiency in Slovenian hyperandrogenic women, at the gene level. Previous endocrine studies indicated large differences in the incidence of 21-hydroxylase deficiency in hyperandrogenic women. The predictive values of the 17-hydroxyprogesterone (17-OHP) response to ACTH stimulation and of HLA typing in screening for carrier status were re-evaluated. DESIGN: Molecular analysis of CYP21 gene, ACTH stimulation and human leucocyte antigen (HLA) typing were performed in 83 consecutive Slovenian hyperandrogenic women. MEASUREMENTS: Cortisol and 17-OHP concentrations were measured at baseline and 60 min after ACTH stimulation. Basal adrenal androgen concentrations were also measured. RESULTS: None of 83 hyperandrogenic patients was affected with non-classical 21-hydroxylase deficiency, but 12 of 81 patients (14.8%) had high concentrations of 17-OHP after stimulation, indicative of carrier status. The increase in 17-OHP concentrations could be explained by a carrier status for CYP21 gene mutations in only three of 12 patients (25%), whereas seven of 69 patients (10. 1%) with normal concentrations of 17-OHP after stimulation were found to be carriers of CYP21 gene mutations, indicating low positive predictive values of ACTH stimulation as a screening test for carriers of 21-hydroxylase deficiency. In total, 11 carriers were identified among 83 patients: seven CYP21 gene deletions/conversions, two Gln(318)Stop and one Val(281)Leu mutation and one gene conversion extending from exon 4 to exon 7 were found. The association between Val(281)Leu mutation and HLA-B14 antigen was confirmed in this Slovenian population. CONCLUSIONS: Basal or ACTH-stimulated 17-OHP concentrations are not a good indicator of the carrier status for 21-hydroxylase deficiency among Slovenian hyperandrogenic patients. Reliable screening for carriers of 21-hydroxylase deficiency is possible only by molecular analysis of the CYP21 gene.


Subject(s)
Adrenal Glands/enzymology , HLA Antigens/genetics , Hyperandrogenism/genetics , Mutation , Polymorphism, Genetic , Steroid 21-Hydroxylase/genetics , White People/genetics , 17-alpha-Hydroxyprogesterone/blood , Adolescent , Adult , Case-Control Studies , DNA Primers , Female , Heterozygote , Humans , Hydrocortisone/blood , Hyperandrogenism/blood , Slovenia
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