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1.
Sci Rep ; 6: 39464, 2016 12 21.
Article in English | MEDLINE | ID: mdl-28000760

ABSTRACT

Tail-anchored (TA) proteins are post-translationally inserted into membranes. The TRC40 pathway targets TA proteins to the endoplasmic reticulum via a receptor comprised of WRB and CAML. TRC40 pathway clients have been identified using in vitro assays, however, the relevance of the TRC40 pathway in vivo remains unknown. We followed the fate of TA proteins in two tissue-specific WRB knockout mouse models and found that their dependence on the TRC40 pathway in vitro did not predict their reaction to receptor depletion in vivo. The SNARE syntaxin 5 (Stx5) was extremely sensitive to disruption of the TRC40 pathway. Screening yeast TA proteins with mammalian homologues, we show that the particular sensitivity of Stx5 is conserved, possibly due to aggregation propensity of its cytoplasmic domain. We establish that Stx5 is an autophagy target that is inefficiently membrane-targeted by alternative pathways. Our results highlight an intimate relationship between the TRC40 pathway and cellular proteostasis.


Subject(s)
Adaptor Proteins, Signal Transducing/genetics , Adenosine Triphosphatases/metabolism , Membrane Proteins/metabolism , Qa-SNARE Proteins/metabolism , Alleles , Animals , Autophagy , Cytoplasm/metabolism , HeLa Cells , Humans , Membrane Proteins/genetics , Mice , Mice, Knockout , Myocytes, Cardiac/cytology , Proteasome Endopeptidase Complex/metabolism , Protein Domains , Proteostasis , RNA, Small Interfering/metabolism
2.
EMBO J ; 35(23): 2536-2552, 2016 12 01.
Article in English | MEDLINE | ID: mdl-27458190

ABSTRACT

The transmembrane recognition complex (TRC40) pathway mediates the insertion of tail-anchored (TA) proteins into membranes. Here, we demonstrate that otoferlin, a TA protein essential for hair cell exocytosis, is inserted into the endoplasmic reticulum (ER) via the TRC40 pathway. We mutated the TRC40 receptor tryptophan-rich basic protein (Wrb) in hair cells of zebrafish and mice and studied the impact of defective TA protein insertion. Wrb disruption reduced otoferlin levels in hair cells and impaired hearing, which could be restored in zebrafish by transgenic Wrb rescue and otoferlin overexpression. Wrb-deficient mouse inner hair cells (IHCs) displayed normal numbers of afferent synapses, Ca2+ channels, and membrane-proximal vesicles, but contained fewer ribbon-associated vesicles. Patch-clamp of IHCs revealed impaired synaptic vesicle replenishment. In vivo recordings from postsynaptic spiral ganglion neurons showed a use-dependent reduction in sound-evoked spiking, corroborating the notion of impaired IHC vesicle replenishment. A human mutation affecting the transmembrane domain of otoferlin impaired its ER targeting and caused an auditory synaptopathy. We conclude that the TRC40 pathway is critical for hearing and propose that otoferlin is an essential substrate of this pathway in hair cells.


Subject(s)
Arsenite Transporting ATPases/metabolism , Exocytosis , Hair Cells, Auditory/metabolism , Hearing , Membrane Proteins/metabolism , Nuclear Proteins/metabolism , Animals , Gene Knockout Techniques , Genetic Complementation Test , Humans , Mice , Nuclear Proteins/genetics , Zebrafish , Zebrafish Proteins/genetics , Zebrafish Proteins/metabolism
3.
J Cell Sci ; 129(3): 502-16, 2016 Feb 01.
Article in English | MEDLINE | ID: mdl-26675233

ABSTRACT

Emerin is a tail-anchored protein that is found predominantly at the inner nuclear membrane (INM), where it associates with components of the nuclear lamina. Mutations in the emerin gene cause Emery-Dreifuss muscular dystrophy (EDMD), an X-linked recessive disease. Here, we report that the TRC40/GET pathway for post-translational insertion of tail-anchored proteins into membranes is involved in emerin-trafficking. Using proximity ligation assays, we show that emerin interacts with TRC40 in situ. Emerin expressed in bacteria or in a cell-free lysate was inserted into microsomal membranes in an ATP- and TRC40-dependent manner. Dominant-negative fragments of the TRC40-receptor proteins WRB and CAML (also known as CAMLG) inhibited membrane insertion. A rapamycin-based dimerization assay revealed correct transport of wild-type emerin to the INM, whereas TRC40-binding, membrane integration and INM-targeting of emerin mutant proteins that occur in EDMD was disturbed. Our results suggest that the mode of membrane integration contributes to correct targeting of emerin to the INM.


Subject(s)
Arsenite Transporting ATPases/metabolism , Membrane Proteins/metabolism , Muscular Dystrophy, Emery-Dreifuss/genetics , Muscular Dystrophy, Emery-Dreifuss/metabolism , Mutation/genetics , Nuclear Envelope/metabolism , Nuclear Proteins/metabolism , Adenosine Triphosphate/metabolism , Cell Line, Tumor , HeLa Cells , Humans , Microsomes/metabolism , Protein Binding/genetics , Protein Processing, Post-Translational/genetics , Protein Transport/genetics
4.
Sci Rep ; 5: 17420, 2015 Dec 02.
Article in English | MEDLINE | ID: mdl-26627908

ABSTRACT

The targeting signals and mechanisms of soluble peroxisomal proteins are well understood, whereas less is known about the signals and targeting routes of peroxisomal membrane proteins (PMP). Pex15 and PEX26, tail-anchored proteins in yeast and mammals, respectively, exert a similar cellular function in the recruitment of AAA peroxins at the peroxisomal membrane. But despite their common role, Pex15 and PEX26 are neither homologs nor they are known to follow similar targeting principles. Here we show that Pex15 targets to peroxisomes in mammalian cells, and PEX26 reaches peroxisomes when expressed in yeast cells. In both proteins C-terminal targeting information is sufficient for correct sorting to the peroxisomal membrane. In yeast, PEX26 follows the pathway that also ensures correct targeting of Pex15: PEX26 enters the endoplasmic reticulum (ER) in a GET-dependent and Pex19-independent manner. Like in yeast, PEX26 enters the ER in mammalian cells, however, independently of GET/TRC40. These data show that conserved targeting information is employed in yeast and higher eukaryotes during the biogenesis of peroxisomal tail-anchored proteins.


Subject(s)
Membrane Proteins/metabolism , Peroxisomes/metabolism , Phosphoproteins/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Arsenite Transporting ATPases/genetics , Arsenite Transporting ATPases/metabolism , HeLa Cells , Humans , Membrane Proteins/genetics , Peroxisomes/genetics , Phosphoproteins/genetics , Protein Transport/physiology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics
5.
Mol Cell ; 56(1): 116-27, 2014 Oct 02.
Article in English | MEDLINE | ID: mdl-25242142

ABSTRACT

Exposure of cells to reactive oxygen species (ROS) causes a rapid and significant drop in intracellular ATP levels. This energy depletion negatively affects ATP-dependent chaperone systems, making ROS-mediated protein unfolding and aggregation a potentially very challenging problem. Here we show that Get3, a protein involved in ATP-dependent targeting of tail-anchored (TA) proteins under nonstress conditions, turns into an effective ATP-independent chaperone when oxidized. Activation of Get3's chaperone function, which is a fully reversible process, involves disulfide bond formation, metal release, and its conversion into distinct, higher oligomeric structures. Mutational studies demonstrate that the chaperone activity of Get3 is functionally distinct from and likely mutually exclusive with its targeting function, and responsible for the oxidative stress-sensitive phenotype that has long been noted for yeast cells lacking functional Get3. These results provide convincing evidence that Get3 functions as a redox-regulated chaperone, effectively protecting eukaryotic cells against oxidative protein damage.


Subject(s)
Adenosine Triphosphatases/physiology , Guanine Nucleotide Exchange Factors/physiology , Oxidative Stress , Saccharomyces cerevisiae Proteins/physiology , Saccharomyces cerevisiae/metabolism , Adenosine Triphosphatases/chemistry , Adenosine Triphosphatases/metabolism , Adenosine Triphosphate/metabolism , Guanine Nucleotide Exchange Factors/chemistry , Guanine Nucleotide Exchange Factors/metabolism , Models, Biological , Molecular Chaperones/metabolism , Molecular Chaperones/physiology , Oxidation-Reduction , Protein Unfolding , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/metabolism
6.
PLoS One ; 9(1): e85033, 2014.
Article in English | MEDLINE | ID: mdl-24392163

ABSTRACT

Tail-Anchored (TA) proteins are inserted into the endoplasmic reticulum (ER) membrane of yeast cells via the posttranslational Guided Entry of Tail-Anchored protein (GET) pathway. The key component of this targeting machinery is the ATPase Get3 that docks to the ER membrane by interacting with a receptor complex formed by the proteins Get1 and Get2. A conserved pathway is present in higher eukaryotes and is mediated by TRC40, homolog of Get3, and the recently identified membrane receptors WRB and CAML. Here, we used yeast lacking the GET1 and GET2 genes and substituted them with WRB and CAML. This rescued the growth phenotypes of the GET receptor mutant. We demonstrate that WRB and CAML efficiently recruit Get3 to the ER membrane and promote the targeting of the TA proteins in vivo. Our results show that the membrane spanning segments of CAML are essential to create a functional receptor with WRB and to ensure TA protein membrane insertion. Finally, we determined the binding parameters of TRC40 to the WRB/CAML receptor. We conclude that together, WRB and CAML are not only necessary but also sufficient to create a functional membrane receptor complex for TRC40. The yeast complementation assay can be used to further dissect the structure-function relationship of the WRB/CAML heteromultimer in the absence of endogenous receptor proteins.


Subject(s)
Endoplasmic Reticulum/metabolism , Intracellular Membranes/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Phenotype , Protein Interaction Domains and Motifs , Protein Transport , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/genetics
7.
J Cell Sci ; 125(Pt 15): 3612-20, 2012 Aug 01.
Article in English | MEDLINE | ID: mdl-22505607

ABSTRACT

Whilst the co-translational translocation of nascent proteins across the mammalian endoplasmic reticulum (ER) is well defined, the capacity of this organelle for post-translational translocation is poorly delineated. Here we identify two human secretory protein precursors, apelin and statherin, as bona fide substrates for post-translational translocation across the ER membrane. Further studies, in combination with Hyalophora cecropia preprocecropin A (ppcecA), show that all three proteins bind to TRC40 and can utilise this component for their delivery to the ER membrane in a well-established in vitro system. However, ppcecA is not an obligate TRC40 substrate, and it can also be delivered to the ER by an alternative TRC40-independent pathway. Upon arrival at the ER membrane, these short secretory proteins appear to be ubiquitously transported across the ER membrane through the Sec61 translocon, apparently irrespective of their delivery route. We speculate that the post-translational translocation of secretory proteins in higher eukaryotes is more prevalent than previously acknowledged.


Subject(s)
Arsenite Transporting ATPases/metabolism , Intercellular Signaling Peptides and Proteins/metabolism , Membrane Proteins/metabolism , Membrane Transport Proteins/metabolism , Protein Processing, Post-Translational , Salivary Proteins and Peptides/metabolism , Amino Acid Sequence , Animals , Apelin , Arsenite Transporting ATPases/genetics , Dogs , Endoplasmic Reticulum/metabolism , HSC70 Heat-Shock Proteins/metabolism , Humans , Hydrazones/pharmacology , Hydroxyurea/analogs & derivatives , Hydroxyurea/pharmacology , Intracellular Membranes/metabolism , Membrane Proteins/genetics , Molecular Sequence Data , Nuclear Proteins/metabolism , Protein Transport , Rabbits , SEC Translocation Channels
8.
J Cell Sci ; 124(Pt 8): 1301-7, 2011 Apr 15.
Article in English | MEDLINE | ID: mdl-21444755

ABSTRACT

Tail-anchored (TA) proteins are post-translationally targeted to and inserted into the endoplasmic reticulum (ER) membrane through their single C-terminal transmembrane domain. Membrane insertion of TA proteins in mammalian cells is mediated by the ATPase TRC40/Asna1 (Get3 in yeast) and a receptor in the ER membrane. We have identified tryptophan-rich basic protein (WRB), also known as congenital heart disease protein 5 (CHD5), as the ER membrane receptor for TRC40/Asna1. WRB shows sequence similarity to Get1, a subunit of the membrane receptor complex for yeast Get3. Using biochemical and cell imaging approaches, we demonstrate that WRB is an ER-resident membrane protein that interacts with TRC40/Asna1 and recruits it to the ER membrane. We identify the coiled-coil domain of WRB as the binding site for TRC40/Asna1 and show that a soluble form of the coiled-coil domain interferes with TRC40/Asna1-mediated membrane insertion of TA proteins. The identification of WRB as a component of the TRC (Get) pathway for membrane insertion of TA proteins raises new questions concerning the proposed roles of WRB (CHD5) in congenital heart disease, and heart and eye development.


Subject(s)
Arsenite Transporting ATPases/metabolism , Endoplasmic Reticulum/metabolism , Nuclear Proteins/metabolism , Arsenite Transporting ATPases/chemistry , Arsenite Transporting ATPases/genetics , Endoplasmic Reticulum/chemistry , Endoplasmic Reticulum/genetics , Humans , Nuclear Proteins/chemistry , Nuclear Proteins/genetics , Protein Binding , Protein Structure, Tertiary , Protein Transport
9.
J Immunol ; 186(6): 3594-605, 2011 Mar 15.
Article in English | MEDLINE | ID: mdl-21296983

ABSTRACT

EBV, the prototypic human γ(1)-herpesvirus, persists for life in infected individuals, despite the presence of vigorous antiviral immunity. CTLs play an important role in the protection against viral infections, which they detect through recognition of virus-encoded peptides presented in the context of HLA class I molecules at the cell surface. The viral peptides are generated in the cytosol and are transported into the endoplasmic reticulum (ER) by TAP. The EBV-encoded lytic-phase protein BNLF2a acts as a powerful inhibitor of TAP. Consequently, loading of antigenic peptides onto HLA class I molecules is hampered, and recognition of BNLF2a-expressing cells by cytotoxic T cells is avoided. In this study, we characterize BNLF2a as a tail-anchored (TA) protein and elucidate its mode of action. Its hydrophilic N-terminal domain is located in the cytosol, whereas its hydrophobic C-terminal domain is inserted into membranes posttranslationally. TAP has no role in membrane insertion of BNLF2a. Instead, Asna1 (also named TRC40), a cellular protein involved in posttranslational membrane insertion of TA proteins, is responsible for integration of BNLF2a into the ER membrane. Asna1 is thereby required for efficient BNLF2a-mediated HLA class I downregulation. To optimally accomplish immune evasion, BNLF2a is composed of two specialized domains: its C-terminal tail anchor ensures membrane integration and ER retention, whereas its cytosolic N terminus accomplishes inhibition of TAP function. These results illustrate how EBV exploits a cellular pathway for TA protein biogenesis to achieve immune evasion, and they highlight the exquisite adaptation of this virus to its host.


Subject(s)
ATP-Binding Cassette Transporters/antagonists & inhibitors , Down-Regulation/immunology , Epstein-Barr Virus Infections/immunology , Epstein-Barr Virus Infections/metabolism , Herpesvirus 4, Human/immunology , Viral Matrix Proteins/physiology , Virus Integration/immunology , ATP Binding Cassette Transporter, Subfamily B, Member 2 , ATP-Binding Cassette Transporters/chemistry , ATP-Binding Cassette Transporters/physiology , Amino Acid Sequence , Arsenite Transporting ATPases/physiology , Cell Line, Transformed , Cell Line, Tumor , Endoplasmic Reticulum/immunology , Endoplasmic Reticulum/metabolism , Epstein-Barr Virus Infections/virology , HEK293 Cells , HeLa Cells , Humans , Molecular Sequence Data , Protein Structure, Tertiary/physiology , Viral Matrix Proteins/chemistry
10.
J Cell Sci ; 123(Pt 9): 1522-30, 2010 May 01.
Article in English | MEDLINE | ID: mdl-20375064

ABSTRACT

Tail-anchored (TA) proteins insert post-translationally into the membrane of the endoplasmic reticulum (ER) and span the membrane by their C-terminal transmembrane domain. We have reconstituted membrane insertion of TA proteins from recombinant Asna1/TA protein complexes and ER-derived membranes. Our data show that Asna1 can mediate membrane insertion of RAMP4 and Sec61beta without the participation of other cytosolic proteins by a mechanism that depends on the presence of ATP or ADP and a protease-sensitive receptor in the ER membrane. By contrast, membrane insertion of cytochrome b5 can proceed independently of Asna1 and nucleotides.


Subject(s)
Arsenite Transporting ATPases/metabolism , Intracellular Membranes/metabolism , Membrane Proteins/metabolism , Animals , Arsenite Transporting ATPases/isolation & purification , Chromatography, Gel , Cytochromes b5/metabolism , Humans , Microsomes/metabolism , Molecular Weight , Nucleotides/metabolism , Rabbits , Recombinant Fusion Proteins/metabolism , SEC Translocation Channels , Solubility
11.
Proc Natl Acad Sci U S A ; 106(50): 21131-6, 2009 Dec 15.
Article in English | MEDLINE | ID: mdl-19948960

ABSTRACT

Tail-anchored (TA) membrane proteins are involved in a variety of important cellular functions, including membrane fusion, protein translocation, and apoptosis. The ATPase Get3 (Asna1, TRC40) was identified recently as the endoplasmic reticulum targeting factor of TA proteins. Get3 consists of an ATPase and alpha-helical subdomain enriched in methionine and glycine residues. We present structural and biochemical analyses of Get3 alone as well as in complex with a TA protein, ribosome-associated membrane protein 4 (Ramp4). The ATPase domains form an extensive dimer interface that encloses 2 nucleotides in a head-to-head orientation and a zinc ion. Amide proton exchange mass spectrometry shows that the alpha-helical subdomain of Get3 displays considerable flexibility in solution and maps the TA protein-binding site to the alpha-helical subdomain. The non-hydrolyzable ATP analogue AMPPNP-Mg(2+)- and ADP-Mg(2+)-bound crystal structures representing the pre- and posthydrolysis states are both in a closed form. In the absence of a TA protein cargo, ATP hydrolysis does not seem to be possible. Comparison with the ADP.AlF(4)(-)-bound structure representing the transition state (Mateja A, et al. (2009) Nature 461:361-366) indicates how the presence of a TA protein is communicated to the ATP-binding site. In vitro membrane insertion studies show that recombinant Get3 inserts Ramp4 in a nucleotide- and receptor-dependent manner. Although ATP hydrolysis is not required for Ramp4 insertion per se, it seems to be required for efficient insertion. We postulate that ATP hydrolysis is needed to release Get3 from its receptor. Taken together, our results provide mechanistic insights into posttranslational targeting of TA membrane proteins by Get3.


Subject(s)
Adenosine Triphosphatases/chemistry , Bacterial Proteins/chemistry , Cell Membrane/metabolism , Membrane Proteins/chemistry , Adenosine Triphosphate/metabolism , Clostridium thermocellum/chemistry , Protein Binding , Protein Transport
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