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1.
Protein Eng Des Sel ; 28(11): 501-6, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26243887

ABSTRACT

The catalytic bioscavenger phosphotriesterase (PTE) is experimentally an effective antidote for organophosphate poisoning. We are interested in the molecular engineering of this enzyme to confer additional functionality, such as improved in vivo longevity. To this aim, we developed PTE cysteine mutants with free sulfhydryls to allow macromolecular attachments to the protein. A library of PTE cysteine mutants were assessed for efficiency in hydrolysing the toxic pesticide metabolite paraoxon, and screened for attachment with a sulfhydryl-reactive small molecule, fluorescein 5-maleimide (F5M), to examine cysteine availability. We established that the newly incorporated cysteines were readily available for labelling, with R90C, E116C and S291C displaying the highest affinity for binding with F5M. Next, we screened for efficiency in attaching a large macromolecule, a 30 000 Da polyethylene glycol (PEG) molecule. Using a solid-phase PEGylation strategy, we found the E116C mutant to be the best single-mutant candidate for attachment with PEG30. Kinetic activity of PEGylated E116C, with paraoxon as substrate, displayed activity approaching that of the unPEGylated wild-type. Our findings demonstrate, for the first time, an efficient cysteine mutation and subsequent method for sulfhydryl-specific macromolecule attachment to PTE.


Subject(s)
Cysteine/chemistry , Organophosphates/metabolism , Phosphoric Triester Hydrolases/chemistry , Phosphoric Triester Hydrolases/metabolism , Cysteine/genetics , Cysteine/metabolism , Fluoresceins/chemistry , Fluoresceins/metabolism , Kinetics , Models, Molecular , Mutation , Organophosphates/analysis , Paraoxon/analysis , Paraoxon/metabolism , Phosphoric Triester Hydrolases/genetics , Protein Engineering
2.
Anal Biochem ; 342(1): 126-33, 2005 Jul 01.
Article in English | MEDLINE | ID: mdl-15958189

ABSTRACT

Acetohydroxy acid synthase (AHAS) and related enzymes catalyze the production of chiral compounds [(S)-acetolactate, (S)-acetohydroxybutyrate, or (R)-phenylacetylcarbinol] from achiral substrates (pyruvate, 2-ketobutyrate, or benzaldehyde). The common methods for the determination of AHAS activity have shortcomings. The colorimetric method for detection of acyloins formed from the products is tedious and does not allow time-resolved measurements. The continuous assay for consumption of pyruvate based on its absorbance at 333 nm, though convenient, is limited by the extremely small extinction coefficient of pyruvate, which results in a low signal-to-noise ratio and sensitivity to interfering absorbing compounds. Here, we report the use of circular dichroism spectroscopy for monitoring AHAS activity. This method, which exploits the optical activity of reaction products, displays a high signal-to-noise ratio and is easy to perform both in time-resolved and in commercial modes. In addition to AHAS, we examined the determination of activity of glyoxylate carboligase. This enzyme catalyzes the condensation of two molecules of glyoxylate to chiral tartronic acid semialdehyde. The use of circular dichroism also identifies the product of glyoxylate carboligase as being in the (R) configuration.


Subject(s)
Acetolactate Synthase/analysis , Acetolactate Synthase/antagonists & inhibitors , Acetolactate Synthase/metabolism , Carboxy-Lyases/metabolism , Circular Dichroism/methods , Escherichia coli/enzymology , Glyoxylates/pharmacology , Lactates/metabolism , Pyruvic Acid/metabolism , Stereoisomerism , Valine/pharmacology
3.
J Biol Chem ; 279(23): 24803-12, 2004 Jun 04.
Article in English | MEDLINE | ID: mdl-15044456

ABSTRACT

The thiamin diphosphate (ThDP)-dependent bio-synthetic enzyme acetohydroxyacid synthase (AHAS) catalyzes decarboxylation of pyruvate and specific condensation of the resulting ThDP-bound two-carbon intermediate, hydroxyethyl-ThDP anion/enamine (HEThDP(-)), with a second ketoacid, to form acetolactate or acetohydroxybutyrate. Whereas the mechanism of formation of HEThDP(-) from pyruvate is well understood, the role of the enzyme in control of the carboligation reaction of HEThDP(-) is not. Recent crystal structures of yeast AHAS from Duggleby's laboratory suggested that an arginine residue might interact with the second ketoacid substrate. Mutagenesis of this completely conserved residue in Escherichia coli AHAS isozyme II (Arg(276)) confirms that it is required for rapid and specific reaction of the second ketoacid. In the mutant proteins, the normally rapid second phase of the reaction becomes rate-determining. A competing alternative nonnatural but stereospecific reaction of bound HEThDP(-) with benzaldehyde to form phenylacetylcarbinol (Engel, S., Vyazmensky, M., Geresh, S., Barak, Z., and Chipman, D. M. (2003) Biotechnol. Bioeng. 84, 833-840) provides a new tool for studying the fate of HEThDP(-) in AHAS, since the formation of the new product has a very different dependence on active site modifications than does acetohydroxyacid acid formation. The effects of mutagenesis of four different residues in the site on the rates and specificities of the normal and unnatural reactions support a critical role for Arg(276) in the stabilization of the transition states for ligation of the incoming second ketoacid with HEThDP(-) and/or for the breaking of the product-ThDP bond. This information makes it possible to engineer the active site so that it efficiently and preferentially catalyzes a new reaction.


Subject(s)
Acetolactate Synthase/chemistry , Arginine/chemistry , Acetolactate Synthase/metabolism , Anions , Benzaldehydes/pharmacology , Binding Sites , Butyrates/pharmacology , Carbon/chemistry , Catalysis , Chromatography, High Pressure Liquid , Circular Dichroism , Conserved Sequence , Crystallography, X-Ray , Dose-Response Relationship, Drug , Escherichia coli/enzymology , Kinetics , Models, Chemical , Models, Molecular , Mutagenesis, Site-Directed , Plasmids/metabolism , Protein Isoforms , Protein Structure, Tertiary
4.
J Bacteriol ; 186(2): 570-4, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14702326

ABSTRACT

Five genes from the ilv-leu operon from Bacillus stearothermophilus have been sequenced. Acetohydroxyacid synthase (AHAS) and its subunits were separately cloned, purified, and characterized. This thermophilic enzyme resembles AHAS III of Escherichia coli, and regulatory subunits of AHAS III complement the catalytic subunit of the AHAS of B. stearothermophilus, suggesting that AHAS III is functionally and evolutionally related to the single AHAS of gram-positive bacteria.


Subject(s)
Acetolactate Synthase/genetics , Geobacillus stearothermophilus/enzymology , Acetolactate Synthase/chemistry , Acetolactate Synthase/metabolism , Amino Acid Sequence , Catalysis , Cloning, Molecular , Molecular Sequence Data , Protein Subunits , Valine/pharmacology
5.
J Mol Biol ; 325(2): 275-84, 2003 Jan 10.
Article in English | MEDLINE | ID: mdl-12488095

ABSTRACT

We have previously proposed a model for the fold of the N-terminal domain of the small, regulatory subunit (SSU) of acetohydroxyacid synthase isozyme III. The fold is an alpha-beta sandwich with betaalphabetabetaalphabeta topology, structurally homologous to the C-terminal regulatory domain of 3-phosphoglycerate dehydrogenase. We suggested that the N-terminal domains of a pair of SSUs interact in the holoenzyme to form two binding sites for the feedback inhibitor valine in the interface between them. The model was supported by mutational analysis and other evidence. We have now examined the role of the C-terminal portion of the SSU by construction of truncated polypeptides (lacking 35, 48, 80, 95, or 112 amino acid residues from the C terminus) and examining the properties of holoenzymes reconstituted using these constructs. The Delta35, Delta48, and Delta80 constructs all lead to essentially complete activation of the catalytic subunits. The Delta80 construct, corresponding to the putative N-terminal domain, has the highest level of affinity for the catalytic subunits and leads to a reconstituted enzyme with k(cat)/K(M) about twice that of the wild-type enzyme. On the other hand, none of these constructs binds valine or leads to a valine-sensitive enzyme on reconstitution. The enzyme reconstituted with the Delta80 construct does not bind valine, either. The N-terminal portion (about 80 amino acid residues) of the SSU is thus necessary and sufficient for recognition and activation of the catalytic subunits, but the C-terminal half of the SSU is required for valine binding and response. We suggest that the C-terminal region of the SSU contributes to monomer-monomer interactions, and provide additional experimental evidence for this suggestion.


Subject(s)
Acetolactate Synthase/metabolism , Escherichia coli/enzymology , Protein Subunits/metabolism , Acetolactate Synthase/genetics , Amino Acid Sequence , Enzyme Activation , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Fluorescence Resonance Energy Transfer , Molecular Sequence Data , Mutagenesis, Site-Directed , Protein Folding , Protein Structure, Tertiary , Protein Subunits/genetics , Valine/metabolism
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