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1.
Eur J Clin Microbiol Infect Dis ; 31(5): 683-94, 2012 May.
Article in English | MEDLINE | ID: mdl-21805195

ABSTRACT

We investigated the presence of nontuberculous mycobacteria (NTM) in three Mexican aquatic systems to evaluate the prevalence with the distribution of NTM species. Key physicochemical parameters of the water samples were determined to find correlations with the species' distributions. We used multilocus sequence analysis (MLSA) based on hsp65, rpoB, and 16S rRNA fragments to determine their taxonomic affiliations. NTM were recovered from water distribution systems and reclaimed water from the Mexico City Metropolitan Area (MCMA). The isolated species were associated with a temperature of 21°C and pH >7.7. The phylogenetic analysis showed that eight of the 14 different NTM strains were unambiguously classifiable: Mycobacterium peregrinum, M. nonchromogenicum (2), M. smegmatis (2), M. fortuitum, M. avium ssp. hominissuis, M. arupense, M. gordonae, and M. chitae. One strain was tentatively identified as M. mantenni/ scrofulaceum and another strain was related to M. porcinum/M. septicum. All NTM species identified in the water distribution system were also detected in the reclaimed water, but some species from the reclaimed water were not found in the water distribution systems. Two of the identified species found in the reclaimed water, M. avium and M. fortuitum, are considered important human opportunistic pathogens.


Subject(s)
Fresh Water/microbiology , Nontuberculous Mycobacteria/classification , Nontuberculous Mycobacteria/isolation & purification , Bacterial Proteins/genetics , Chaperonin 60/genetics , DNA-Directed RNA Polymerases/genetics , Fresh Water/chemistry , Hydrogen-Ion Concentration , Mexico , Molecular Sequence Data , Nontuberculous Mycobacteria/genetics , Prevalence , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Temperature
2.
Appl Environ Microbiol ; 67(8): 3655-64, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11472944

ABSTRACT

In addition to forming symbiotic nodules on legumes, rhizobial strains are members of soil or rhizosphere communities or occur as endophytes, e.g., in rice. Two rhizobial strains which have been isolated from root nodules of the aquatic legumes Aeschynomene fluminensis (IRBG271) and Sesbania aculeata (IRBG74) were previously found to promote rice growth. In addition to analyzing their phylogenetic positions, we assessed the suitability of the 16S-23S ribosomal DNA (rDNA) intergenic spacer (IGS) sequences for the differentiation of closely related rhizobial taxa and for the development of PCR protocols allowing the specific detection of strains in the environment. 16S rDNA sequence analysis (sequence identity, 99%) and phylogenetic analysis of IGS sequences showed that strain IRBG271 was related to but distinct from Bradyrhizobium elkanii. Rhizobium sp. (Sesbania) strain IRBG74 was located in the Rhizobium-Agrobacterium cluster as a novel lineage according to phylogenetic 16S rDNA analysis (96.8 to 98.9% sequence identity with Agrobacterium tumefaciens; emended name, Rhizobium radiobacter). Strain IRBG74 harbored four copies of rRNA operons whose IGS sequences varied only slightly (2 to 9 nucleotides). The IGS sequence analyses allowed intraspecies differentiation, especially in the genus Bradyrhizobium, as illustrated here for strains of Bradyrhizobium japonicum, B. elkanii, Bradyrhizobium liaoningense, and Bradyrhizobium sp. (Chamaecytisus) strain BTA-1. It also clearly differentiated fast-growing rhizobial species and strains, albeit with lower statistical significance. Moreover, the high sequence variability allowed the development of highly specific IGS-targeted nested-PCR assays. Strains IRBG74 and IRBG271 were specifically detected in complex DNA mixtures of numerous related bacteria and in the DNA of roots of gnotobiotically cultured or even of soil-grown rice plants after inoculation. Thus, IGS sequence analysis is an attractive technique for both microbial ecology and systematics.


Subject(s)
Bradyrhizobium/isolation & purification , DNA, Ribosomal Spacer/analysis , Oryza/microbiology , Plant Roots/microbiology , Polymerase Chain Reaction/methods , Rhizobium/isolation & purification , Bradyrhizobium/classification , Bradyrhizobium/genetics , Bradyrhizobium/growth & development , DNA Primers , Molecular Sequence Data , Oryza/growth & development , Phylogeny , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 23S/genetics , Rhizobium/classification , Rhizobium/genetics , Rhizobium/growth & development , Sequence Analysis, DNA
3.
Rev. esp. patol ; 34(1): 37-43, ene. 2001. ilus
Article in Es | IBECS | ID: ibc-7882

ABSTRACT

El angiosarcoma cardíaco es el tumor maligno más frecuente en el corazón, dentro de la extrema rareza que suponen las neoplasias en este órgano. Describimos un caso clínica y anatomopatológicamente representativo, originado en la aurícula derecha y tratado con trasplante cardíaco (AU)


Subject(s)
Adult , Male , Humans , Hemangiosarcoma/surgery , Hemangiosarcoma/diagnosis , Hemangiosarcoma/pathology , Echocardiography/methods , Abdomen/pathology , Abdomen , Abdomen , Tomography, Emission-Computed/methods , Magnetic Resonance Imaging/methods , Pericardial Effusion/complications , Pericardial Effusion/diagnosis , Cardiac Tamponade/complications , Cardiac Tamponade/diagnosis , Pericardium/anatomy & histology , Pericardium/cytology , Pericardium/pathology , Biopsy, Needle/methods , Microscopy/methods , Histocytological Preparation Techniques , Histological Techniques , Reticulin , Platelet Endothelial Cell Adhesion Molecule-1 , Antigens, CD34 , Magnetic Resonance Spectroscopy , Heart Atria/anatomy & histology , Heart Atria/surgery , Heart Atria/pathology , Neoplasms, Multiple Primary/surgery , Neoplasms, Multiple Primary/diagnosis , Neoplasm Recurrence, Local/complications , Neoplasm Recurrence, Local/diagnosis , Neoplasm Recurrence, Local/pathology , Heart Neoplasms/surgery , Heart Neoplasms/diagnosis , Heart Neoplasms/pathology , Thorax/pathology , Thorax , Punctures/methods , Pericarditis, Constrictive/complications , Pericarditis, Constrictive/diagnosis , Pericarditis, Constrictive/pathology , Neoplasm Metastasis/physiopathology , Neoplasm Metastasis/diagnosis , Lung Neoplasms/complications , Lung Neoplasms/diagnosis , Lung Neoplasms/mortality , Pleural Neoplasms/complications , Pleural Neoplasms/diagnosis , Pleural Neoplasms/mortality , Pleural Neoplasms/pathology
4.
Syst Appl Microbiol ; 23(3): 418-25, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11108022

ABSTRACT

Thirty-six strains of slow-growing rhizobia isolated from nodules of four woody legumes endemic to the Canary islands were characterised by 16S rDNA PCR-RFLP analyses (ARDRA) and LMW RNA profiling, and compared with reference strains representing Bradyrhizobium japonicum, B. elkanii, B. liaoningense, and two unclassified Bradyrhizobium sp. (Lupinus) strains. Both techniques showed similar results, indicating the existence of three genotypes among the Canarian isolates. Analysis of the combined RFLP patterns obtained with four endonucleases, showed the existence of predominant genotype comprising 75% of the Canarian isolates (BTA-1 group) and the Bradyrhizobium sp. (Lupinus) strains. A second genotype was shared by nine Canarian isolates (BGA-1 group) and the B. japonicum and B. liaoningense reference strains. The BES-5 strain formed an independent group, as also did the B. elkanii reference strains. LMW RNA profile analysis consistently resolved the same three genotypes detected by 16S ARDRA among the Canarian isolates, and suggested that all these isolates are genotypically more related to B. japonicum than to B. elkanii or B. liaoningense. Cluster analysis of the combined 16S ARDRA and LMW RNA profiles resolved the BTA-1 group with the Bradyrhizobium sp. (Lupinus) strains, and the BES-5 isolate, as a well separated sub-branch of the B. japonicum cluster. Thus, the two types of analyses indicated that the isolates related to BTA-1 conform a group of bradyrhizobial strains that can be clearly distinguishable from representatives of the tree currently described Bradyrhizobium species. No correlation between genotypes, host legumes, and geographic location was found.


Subject(s)
Bradyrhizobium/genetics , DNA, Ribosomal/genetics , Fabaceae/microbiology , Plants, Medicinal , Polymorphism, Restriction Fragment Length , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Bradyrhizobium/classification , Cluster Analysis , Geography , Spain
5.
Rev Esp Cardiol ; 53(11): 1474-95, 2000 Nov.
Article in Spanish | MEDLINE | ID: mdl-11084006

ABSTRACT

Maternal adaptation to pregnancy includes reproductive hormone interaction plasma, volume changes with an increase in total body water, vascular alterations with a decrease in systemic resistance and modifications associated with hypercoagulability. These explain, in part, the appearance of signs and symptoms, even in a normal pregnant woman, that are difficult to distinguish from those occurring in heart disease and why some cardiac abnormalities are not well tolerated during pregnancy. Cardiovascular abnormalities are considered the first non-obstetric cause of morbidity and mortality during pregnancy. Rheumatic and congenital heart diseases are currently the most frequent cardiopathy found in women of childbearing age, followed by hypertension, coronary artery disease and arrhythmia. Although pregnancy is well tolerated by most women with heart disease, there are some cardiovascular abnormalities which place the mother and the infant at extremely high risk: patients with congestive heart failure and severe cardiac dysfunction, pulmonary hypertension, cyanotic congenital heart disease, Marfan's syndrome, severe obstructive lesions of the left side of the heart, patients with prosthetic cardiac valves and antecedents of peripartum cardiomyopathy should be encouraged to avoid pregnancy and the interruption of pregnancy may be advisable in cases with great risk of disability or death. The most severe cardiopathies significantly increase the risk of fetal loss and the presence of a congenital cardiac abnormality in either parent increases the risk of congenital cardiac disease in the fetus. Medical care must be initiated early, prior to conception and women with cardiopathy should be informed of the possible risks of pregnancy to both the mother and fetus.


Subject(s)
Pregnancy Complications, Cardiovascular/therapy , Age Factors , Anticoagulants/therapeutic use , Cardiotonic Agents/therapeutic use , Cardiovascular Physiological Phenomena , Endocarditis, Bacterial/prevention & control , Female , Fetal Diseases/epidemiology , Fetal Diseases/etiology , Heart Defects, Congenital/complications , Heart Valve Diseases/therapy , Heart Valve Prosthesis , Humans , Pregnancy , Risk Factors
6.
Rev Esp Cardiol ; 52(9): 737-40, 1999 Sep.
Article in Spanish | MEDLINE | ID: mdl-10523889

ABSTRACT

The development of a pseudoaneurysms of the ascending aorta is a potential complication after composite grafts surgery for combined disorders that simultaneously affect the aortic valve and ascending aorta. Pseudoaneurysm has been reported to range from 7% to 25% of cases, and it is due to dehiscence of the suture line at anastomosis. Clinical spectrum, which depends on the location of this dehiscence varies from the totally asymptomatic patient to one with NYHA class IV heart failure, with the possibility of its clinical status rapidly worsening. We report a case of progressive haemodynamic deterioration as a consequence of a peri-annular dehiscence that led to a significant regurgitant volume from the pseudoaneurysm cavity to the left ventricle mimicking a severe aortic insufficiency. The role of echocardiography is reviewed in the diagnosis and the management of complications, as well as the necessary follow up of patients with composite aortic grafts.


Subject(s)
Aneurysm, False/etiology , Aorta/surgery , Aortic Aneurysm/etiology , Aortic Valve Insufficiency/diagnosis , Blood Vessel Prosthesis , Heart Valve Prosthesis , Aged , Aneurysm, False/diagnosis , Aortic Aneurysm/diagnosis , Aortic Valve , Diagnosis, Differential , Echocardiography, Transesophageal , Electrocardiography , Humans , Male , Sutures/adverse effects
7.
J Bacteriol ; 181(18): 5606-14, 1999 Sep.
Article in English | MEDLINE | ID: mdl-10482500

ABSTRACT

Screening of derivatives of Rhizobium etli KIM5s randomly mutagenized with mTn5SSgusA30 resulted in the identification of strain KIM-G1. Its rough colony appearance, flocculation in liquid culture, and Ndv(-) Fix(-) phenotype were indicative of a lipopolysaccharide (LPS) defect. Electrophoretic analysis of cell-associated polysaccharides showed that KIM-G1 produces only rough LPS. Composition analysis of purified LPS oligosaccharides from KIM-G1 indicated that it produces an intact LPS core trisaccharide (alpha-D-GalA-1-->4[alpha-D-GalA-1-->5]-Kdo) and tetrasaccharide (alpha-D-Gal-1-->6[alpha-D-GalA-1-->4]-alpha-D-Man-1-->5Kdo), strongly suggesting that the transposon insertion disrupted a locus involved in O-antigen biosynthesis. Five monosaccharides (Glc, Man, GalA, 3-O-Me-6-deoxytalose, and Kdo) were identified as the components of the repeating O unit of the smooth parent strain, KIM5s. Strain KIM-G1 was complemented with a 7.2-kb DNA fragment from KIM5s that, when provided in trans on a broad-host-range vector, restored the smooth LPS and the full capacity of nodulation and fixation on its host Phaseolus vulgaris. The mTn5 insertion in KIM-G1 was located at the N terminus of a putative alpha-glycosyltransferase, which most likely had a polar effect on a putative beta-glycosyltransferase located downstream. A third open reading frame with strong homology to sugar epimerases and dehydratases was located upstream of the insertion site. The two glycosyltransferases are strain specific, as suggested by Southern hybridization analysis, and are involved in the synthesis of the variable portion of the LPS, i.e., the O antigen. This newly identified LPS locus was mapped to a 680-kb plasmid and is linked to the lpsbeta2 gene recently reported for R. etli CFN42.


Subject(s)
Fabaceae/microbiology , Lipopolysaccharides/biosynthesis , O Antigens/biosynthesis , Oligosaccharides/biosynthesis , Plants, Medicinal , Plasmids , Rhizobium/physiology , Base Sequence , Carbohydrate Sequence , Conjugation, Genetic , Fabaceae/physiology , Genetic Complementation Test , Lipopolysaccharides/chemistry , Molecular Sequence Data , Mutagenesis, Insertional , O Antigens/chemistry , Oligosaccharides/chemistry , Open Reading Frames , Promoter Regions, Genetic , Restriction Mapping , Rhizobium/genetics , Trisaccharides/biosynthesis , Trisaccharides/chemistry
8.
Z Naturforsch C J Biosci ; 54(5-6): 359-70, 1999.
Article in English | MEDLINE | ID: mdl-10431388

ABSTRACT

A DNA probe specific for biocontrol strains of Pseudomonas was produced by screening randomly amplified polymorphic DNA (RAPD) PCR fragments. Specificity of the probe was assessed by dot blot and colony hybridization. It was used to specifically determine the population of these strains on roots of Cucumis sativus cv. Delikatess. Two polymorphic RAPD fragments of 750 bp, and 550 bp showed identical specificity. The biocontrol strain Pseudomonas sp. W34 was shown to be competitive in the rhizosphere of cucumber and to maintain a stable population for at least 10 days when inoculated on the seed. The phylogenetic relationships between the biocontrol and reference strains were analyzed at the strain level by means of RAPD and repetitive sequence-based PCR genomic fingerprinting (rep-PCR), and at higher taxonomic levels by means of amplified 16S ribosomal DNA restriction analysis ARDRA. It was shown that the antagonistic strains are closely related, forming a separate cluster from other non-antagonistic and reference Pseudomonas strains, their taxonomic placement remaining uncertain.


Subject(s)
Cucumis sativus/microbiology , Pest Control, Biological , Phylogeny , Pseudomonas/classification , DNA Fingerprinting , DNA Probes , Genotype , Plant Roots/microbiology , Pseudomonas/genetics , Pseudomonas/isolation & purification , Random Amplified Polymorphic DNA Technique
9.
Rev Esp Cardiol ; 52(1): 59-62, 1999 Jan.
Article in Spanish | MEDLINE | ID: mdl-9989141

ABSTRACT

We report a case of a 72-year-old woman with coronary artery disease in whom a thrombus in transit in the right atrium was diagnosed accidentally. After 72 hours of treatment with intravenous anticoagulants she developed a pulmonary thromboembolism resolved with systemic fibrinolysis. This is a rare case in which such a diagnosis preceded an embolic event. This fact raises the controversy about the best therapeutic management of this unusual form of thromboembolic illness.


Subject(s)
Echocardiography , Heart Diseases/diagnostic imaging , Pulmonary Embolism/diagnostic imaging , Thrombosis/diagnostic imaging , Aged , Anticoagulants/therapeutic use , Drug Therapy, Combination , Female , Heart Atria/diagnostic imaging , Heart Diseases/complications , Heart Diseases/drug therapy , Humans , Pulmonary Embolism/drug therapy , Pulmonary Embolism/etiology , Thrombolytic Therapy , Thrombosis/complications , Thrombosis/drug therapy , Time Factors
10.
Appl Environ Microbiol ; 64(6): 2096-104, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9603820

ABSTRACT

We present a phylogenetic analysis of nine strains of symbiotic nitrogen-fixing bacteria isolated from nodules of tagasaste (Chamaecytisus proliferus) and other endemic woody legumes of the Canary Islands, Spain. These and several reference strains were characterized genotypically at different levels of taxonomic resolution by computer-assisted analysis of 16S ribosomal DNA (rDNA) PCR-restriction fragment length polymorphisms (PCR-RFLPs), 16S-23S rDNA intergenic spacer (IGS) RFLPs, and repetitive extragenic palindromic PCR (rep-PCR) genomic fingerprints with BOX, ERIC, and REP primers. Cluster analysis of 16S rDNA restriction patterns with four tetrameric endonucleases grouped the Canarian isolates with the two reference strains, Bradyrhizobium japonicum USDA 110spc4 and Bradyrhizobium sp. strain (Centrosema) CIAT 3101, resolving three genotypes within these bradyrhizobia. In the analysis of IGS RFLPs with three enzymes, six groups were found, whereas rep-PCR fingerprinting revealed an even greater genotypic diversity, with only two of the Canarian strains having similar fingerprints. Furthermore, we show that IGS RFLPs and even very dissimilar rep-PCR fingerprints can be clustered into phylogenetically sound groupings by combining them with 16S rDNA RFLPs in computer-assisted cluster analysis of electrophoretic patterns. The DNA sequence analysis of a highly variable 264-bp segment of the 16S rRNA genes of these strains was found to be consistent with the fingerprint-based classification. Three different DNA sequences were obtained, one of which was not previously described, and all belonged to the B. japonicum/Rhodopseudomonas rDNA cluster. Nodulation assays revealed that none of the Canarian isolates nodulated Glycine max or Leucaena leucocephala, but all nodulated Acacia pendula, C. proliferus, Macroptilium atropurpureum, and Vigna unguiculata.


Subject(s)
DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Genes, Bacterial , Rhizobiaceae/genetics , Atlantic Islands , Base Sequence , Cloning, Molecular , DNA Fingerprinting , DNA Primers/genetics , Fabaceae/microbiology , Plants, Medicinal , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 23S/genetics , Rhizobiaceae/isolation & purification
11.
Rev Esp Cardiol ; 51(4): 336-9, 1998 Apr.
Article in Spanish | MEDLINE | ID: mdl-9608807

ABSTRACT

Wegener's granulomatosis (WG) is a necrotizing and granulomatous vasculitis that usually affects the upper and lower respiratory tract and the kidneys. Cardiac involvement is rare although pericarditis, coronary arteritis, myocarditis, valvulitis and arrhythmias have been described. Acute myocardial infarction with clinical expression is an exceptional complication of Wegener's granulomatosis. We report a case of a 30-year-old man with Wegener's granulomatosis who suffered an acute myocardial infarction during the initial phase of the disease, following seven days of treatment with glucocorticoids and cyclophosphamide. Transthoracic echocardiography showed abnormal regional wall motion with septal hypokinesia and apical akinesia. Cardiac catheterization revealed an ectasic segment in the proximal left anterior descending coronary artery and total occlusion in the mid-segment. Medical therapy with prednisone and cyclophosphamide was continued. No complications and initial remission were achieved.


Subject(s)
Granulomatosis with Polyangiitis/complications , Myocardial Infarction/etiology , Adult , Anti-Inflammatory Agents/therapeutic use , Coronary Angiography , Cyclophosphamide/therapeutic use , Electrocardiography , Granulomatosis with Polyangiitis/drug therapy , Humans , Immunosuppressive Agents/therapeutic use , Male , Myocardial Infarction/diagnosis , Prednisone/therapeutic use
12.
Rev Esp Cardiol ; 50(8): 597-9, 1997 Aug.
Article in Spanish | MEDLINE | ID: mdl-9340703

ABSTRACT

We report a case of a 58-year-old woman with rheumatic mitral stenosis scheduled for percutaneous valvuloplasty. Prior left and right ventricular angiograms showed multiple diverticula at left ventricular apical and diaphragmatic walls and right ventricular diaphragmatic wall. Chest x-ray and echocardiogram were normal. Magnetic resonance imaging was concordant with catheterization findings and ruled out other cardiac malformations. The risk of ventricular perforation changed our indication of percutaneous valvuloplasty in favor of open heart commissurotomy.


Subject(s)
Mitral Valve Stenosis/complications , Rheumatic Heart Disease/complications , Ventricular Dysfunction, Left , Cardiac Surgical Procedures/methods , Diverticulum/etiology , Diverticulum/surgery , Female , Humans , Middle Aged , Mitral Valve Stenosis/surgery , Rheumatic Heart Disease/surgery , Ventricular Dysfunction, Left/etiology , Ventricular Dysfunction, Left/surgery
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