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Nat Genet ; 47(11): 1334-40, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26457648

ABSTRACT

Juvenile myelomonocytic leukemia (JMML) is a rare and severe myelodysplastic and myeloproliferative neoplasm of early childhood initiated by germline or somatic RAS-activating mutations. Genetic profiling and whole-exome sequencing of a large JMML cohort (118 and 30 cases, respectively) uncovered additional genetic abnormalities in 56 cases (47%). Somatic events were rare (0.38 events/Mb/case) and restricted to sporadic (49/78; 63%) or neurofibromatosis type 1 (NF1)-associated (8/8; 100%) JMML cases. Multiple concomitant genetic hits targeting the RAS pathway were identified in 13 of 78 cases (17%), disproving the concept of mutually exclusive RAS pathway mutations and defining new pathways activated in JMML involving phosphoinositide 3-kinase (PI3K) and the mTORC2 complex through RAC2 mutation. Furthermore, this study highlights PRC2 loss (26/78; 33% of sporadic JMML cases) that switches the methylation/acetylation status of lysine 27 of histone H3 in JMML cases with altered RAS and PRC2 pathways. Finally, the association between JMML outcome and mutational profile suggests a dose-dependent effect for RAS pathway activation, distinguishing very aggressive JMML rapidly progressing to acute myeloid leukemia.


Subject(s)
Gene Regulatory Networks/genetics , Leukemia, Myelomonocytic, Juvenile/genetics , Mutation , Polycomb Repressive Complex 2/genetics , Signal Transduction/genetics , ras Proteins/genetics , Acetylation , Acute Disease , Child , Child, Preschool , DNA Copy Number Variations , Disease Progression , Female , Histones/metabolism , Humans , Infant , Leukemia, Myeloid/genetics , Leukemia, Myeloid/metabolism , Leukemia, Myelomonocytic, Juvenile/metabolism , Male , Methylation , Microscopy, Confocal , Phosphatidylinositol 3-Kinases/genetics , Phosphatidylinositol 3-Kinases/metabolism , Polycomb Repressive Complex 2/metabolism , Protein Subunits/genetics , Protein Subunits/metabolism , Sequence Analysis, DNA/methods , Survival Analysis , Transcriptome , ras Proteins/metabolism
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