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1.
Bioorg Med Chem ; 28(11): 115494, 2020 06 01.
Article in English | MEDLINE | ID: mdl-32312486

ABSTRACT

A series of compounds was designed and synthesized having two imidazolium rings separated by a polymethylene spacer and having alkyl substituents on each of the imidazolium rings. The compounds were assayed for their effects on the activity of galactosyltransferase WbwC, and also on the growth of Gram-negative and Gram-positive bacteria, as well as human cells. The inhibition observed on enzyme activities and cell growth was dependent on the total number of carbons in the spacer and the alkyl substituents on the imidazolium rings. These readily synthesized, achiral compounds have potential as antimicrobial and antiseptic agents.


Subject(s)
Anti-Bacterial Agents/pharmacology , Escherichia coli Proteins/antagonists & inhibitors , Galactosyltransferases/antagonists & inhibitors , Gram-Negative Bacteria/drug effects , Gram-Positive Bacteria/drug effects , Imidazoles/pharmacology , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/chemistry , Cell Proliferation/drug effects , Cells, Cultured , Dose-Response Relationship, Drug , Escherichia coli Proteins/metabolism , Galactosyltransferases/metabolism , Gram-Negative Bacteria/growth & development , Gram-Positive Bacteria/growth & development , Humans , Imidazoles/chemical synthesis , Imidazoles/chemistry , Molecular Structure , Salts/chemical synthesis , Salts/chemistry , Salts/pharmacology , Structure-Activity Relationship
2.
Int J Pharm ; 552(1-2): 388-393, 2018 Dec 01.
Article in English | MEDLINE | ID: mdl-30300707

ABSTRACT

Galactosyltransferases are a family of enzymes responsible for the synthesis of glycan chains which are involved in cell proliferation, adhesion and apoptosis. A recently synthesized galactosyltransferase inhibitor, 2-naphthyl 2-butanamido-2-deoxy-1-thio-ß-D-glucopyranoside (612), has been found to selectively inhibit ß1,4-galactosyltransferase over ß1,3-galactosyltransferase and, therefore, has potential to suppress the synthesis of cancer associated epitopes. However, the application of this inhibitory activity in biological systems remains unknown. In this study, 612 was introduced into a cationic liposome (LP) delivery system, and the anti-proliferative effects of both free and the LP-incorporated 612 (612-LP) were investigated in A549 lung cancer cells, which actively express anionic sialic acid moieties on the surfaces of cells. The anti-proliferative effects were evaluated via MTT assays. The results revealed that free 612 and empty LP impose neither anti-proliferative nor apoptotic effects on cancer cells at low doses, whereas the 612-LP system inhibited cancer cell growth at a concentration as low as 0.1 µg/mL after 3 days of incubation, suggesting that this formulation enabled efficient delivery of 612 into cells and promoted the anti-proliferative activity of 612 against cancer cells. Therefore, this highly specific inhibitor 612 has the potential for development as an effective anti-cancer agent and merits further investigation.


Subject(s)
Antineoplastic Agents/administration & dosage , N-Acetyllactosamine Synthase/antagonists & inhibitors , Thioglucosides/administration & dosage , A549 Cells , Cell Survival/drug effects , Glycosylation , Humans , Liposomes
3.
Curr Med Chem ; 25(42): 5803-5821, 2018.
Article in English | MEDLINE | ID: mdl-30674243

ABSTRACT

The development of isozyme-selective heme oxygenase (HO) inhibitors promises powerful pharmacological tools to elucidate the regulatory characteristics of the HO system. It is already known that HO has cytoprotective properties with a role in several disease states; thus, it is an enticing therapeutic target. Historically, the metalloporphyrins have been used as competitive HO inhibitors based on their structural similarity to the substrate, heme. However, heme's important role in several other proteins (e.g. cytochromes P450, nitric oxide synthase), results in non-selectivity being an unfortunate side effect. Reports that azalanstat and other non-porphyrin molecules inhibited HO led to a multi-faceted effort over a decade ago to develop novel compounds as potent, selective inhibitors of HO. The result was the creation of the first generation of non-porphyrin based, non-competitive inhibitors with selectivity for HO, including a subset with isozyme selectivity for HO-1. Using X-ray crystallography, the structures of several complexes of HO-1 with novel inhibitors have been elucidated and provided insightful information regarding the salient features required for inhibitor binding. This included the structural basis for non-competitive inhibition, flexibility and adaptability of the inhibitor binding pocket, and multiple, potential interaction subsites, all of which can be exploited in future drug-design strategies. Notably, HO-1 inhibitors are of particular interest for the treatment of hyperbilirubinemia and certain types of cancer. Key features based on this initial study have already been used by others to discover additional potential HO-1 inhibitors. Moreover, studies have begun to use selected compounds and determine their effects in some disease models.


Subject(s)
Azoles/chemistry , Enzyme Inhibitors/chemistry , Heme Oxygenase-1/antagonists & inhibitors , Azoles/metabolism , Binding Sites , Crystallography, X-Ray , Drug Design , Enzyme Inhibitors/metabolism , Heme Oxygenase-1/metabolism , Humans , Molecular Dynamics Simulation , Protective Agents/chemistry , Protective Agents/metabolism , Structure-Activity Relationship
4.
Can J Physiol Pharmacol ; 95(12): 1454-1461, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28793202

ABSTRACT

Metalloporphyrin heme oxygenase (HO) inhibitors have made an important contribution to elucidating the role of HO in physiological processes. Nevertheless, their off-target effects have drawn substantial criticism, which prompted us to develop non-porphyrin, azole-based inhibitors of HO. These second-generation HO inhibitors were evaluated using spleen and brain microsomes from rats as native sources of HO-1 and HO-2, respectively. Recently, the use of azole-based inhibitors of HO has been extended to other mammalian species and, as a consequence, it will be important to characterize the inhibitors in these species. The goal of this study was to compare the inhibitory profile of imidazole- and benzimidazole-based inhibitors of HO in a breast-cancer-implanted mouse to that of an untreated rat. For spleen and brain microsomes from both species, HO protein expression was determined by Western blotting and concentration-response curves for imidazole- and benzimidazole-derivative inhibition of HO activity were determined using a headspace gas-chromatographic assay. It was found that the effects on HO activity by imidazole and benzimidazole derivatives were different between the 2 species and were not explained by differences in HO expression. Thus, the HO inhibitory profile should be determined for azole derivatives before they are used in mammalian species other than rats.


Subject(s)
Benzimidazoles/chemistry , Benzimidazoles/pharmacology , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Heme Oxygenase (Decyclizing)/antagonists & inhibitors , Imidazoles/chemistry , Imidazoles/pharmacology , Animals , Brain/drug effects , Brain/metabolism , Female , Gene Expression Regulation, Enzymologic/drug effects , Heme Oxygenase (Decyclizing)/metabolism , Male , Mice , Rats , Spleen/drug effects , Spleen/metabolism
5.
J Bacteriol ; 197(12): 2012-9, 2015 Jun 15.
Article in English | MEDLINE | ID: mdl-25845842

ABSTRACT

UNLABELLED: The opportunistic pathogen Pseudomonas aeruginosa produces two major cell surface lipopolysaccharides, characterized by distinct O antigens, called common polysaccharide antigen (CPA) and O-specific antigen (OSA). CPA contains a polymer of D-rhamnose (D-Rha) in α1-2 and α1-3 linkages. Three putative glycosyltransferase genes, wbpX, wbpY, and wbpZ, are part of the CPA biosynthesis cluster. To characterize the enzymatic function of the wbpZ gene product, we chemically synthesized the donor substrate GDP-D-Rha and enzymatically synthesized GDP-D-[(3)H]Rha. Using nuclear magnetic resonance (NMR) spectroscopy, we showed that WbpZ transferred one D-Rha residue from GDP-D-Rha in α1-3 linkage to both GlcNAc- and GalNAc-diphosphate-lipid acceptor substrates. WbpZ is also capable of transferring D-mannose (D-Man) to these acceptors. Therefore, WbpZ has a relaxed specificity with respect to both acceptor and donor substrates. The diphosphate group of the acceptor, however, is required for activity. WbpZ does not require divalent metal ion for activity and exhibits an unusually high pH optimum of 9. WbpZ from PAO1 is therefore a GDP-D-Rha:GlcNAc/GalNAc-diphosphate-lipid α1,3-D-rhamnosyltransferase that has significant activity of GDP-D-Man:GlcNAc/GalNAc-diphosphate-lipid α1,3-D-mannosyltransferase. We used site-directed mutagenesis to replace the Asp residues of the two DXD motifs with Ala. Neither of the mutant constructs of wbpZ (D172A or D254A) could be used to rescue CPA biosynthesis in the ΔwbpZ knockout mutant in a complementation assay. This suggested that D172 and D254 are essential for WbpZ function. This work is the first detailed characterization study of a D-Rha-transferase and a critical step in the development of CPA synthesis inhibitors. IMPORTANCE: This is the first characterization of a D-rhamnosyltransferase and shows that it is essential in Pseudomonas aeruginosa for the synthesis of the common polysaccharide antigen.


Subject(s)
Antigens, Bacterial/metabolism , Bacterial Proteins/metabolism , Gene Expression Regulation, Bacterial/physiology , Glycosyltransferases/metabolism , Polysaccharides, Bacterial/metabolism , Pseudomonas aeruginosa/enzymology , Amino Acid Sequence , Antigens, Bacterial/genetics , Bacterial Proteins/genetics , Bacterial Proteins/immunology , Cloning, Molecular , Gene Expression Regulation, Enzymologic/physiology , Glycosyltransferases/genetics , Mutation , Polysaccharides, Bacterial/immunology , Pseudomonas aeruginosa/genetics , Pseudomonas aeruginosa/immunology , Substrate Specificity
6.
J Neurochem ; 131(6): 778-90, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25111043

ABSTRACT

Heme oxygenase-1 (HO-1) encoded by the HMOX1 gene is a 32-kDa stress protein that catabolizes heme to biliverdin, free iron, and carbon monoxide (CO). Glial HO-1 is over-expressed in the CNS of subjects with Alzheimer's disease (AD), Parkinson's disease (PD), and multiple sclerosis (MS). The HMOX1 gene is exquisitely sensitive to oxidative stress and is induced in brain and other tissues in various models of disease and trauma. Induction of the glial HMOX1 gene may lead to pathological brain iron deposition, intracellular oxidative damage, and bioenergetic failure in AD and other human CNS disorders such as PD and MS. Therefore, targeted suppression of glial HO-1 hyperactivity may prove to be a rational and effective therapeutic intervention in AD and related neurodegenerative disorders. In this study, we report the effects of QC-47, QC-56, and OB-28, novel azole-based competitive and reversible inhibitors of HO-1, on oxidative damage to whole-cell and mitochondrial compartments in rat astrocytes transfected with the HMOX1 gene. We also report the effect of OB-28 on the behavior and neuropathology of APP(swe)/PS1(∆E9) mice. OB-28 was found to reduce oxidative damage to whole-cell and mitochondrial compartments in rat astrocytes transfected with the HMOX1 gene. Moreover, OB-28 was found to significantly counter behavioral deficits and neuropathological alterations in APP(swe)/PS1(∆E9) mice. Attenuation of AD-associated behavioral deficits and neuropathological changes suggests that HO-1 may be a promising target for neuroprotective intervention in AD and other neurodegenerative diseases. We propose that the targeted suppression of glial heme oxygenase-1 (HO-1) hyperactivity may prove to be a rational and effective therapeutic intervention in Alzheimer's disease (AD) and related neurodegenerative disorders. We report attenuation by a selective HO-1 inhibitor of oxidative damage to whole-cell and mitochondrial compartments in astrocytes in vitro and amelioration of behavioral anomalies in a transgenic mouse model of AD.


Subject(s)
Alzheimer Disease/metabolism , Astrocytes/drug effects , Azoles/pharmacology , Heme Oxygenase-1/antagonists & inhibitors , Mitochondria/drug effects , Aging/metabolism , Alzheimer Disease/genetics , Animals , Disease Models, Animal , Heme Oxygenase-1/genetics , Humans , Male , Mice , Mice, Transgenic , Mitochondria/metabolism , Neuroglia/metabolism , Oxidation-Reduction/drug effects , Oxidative Stress/drug effects
7.
J Bacteriol ; 196(17): 3122-33, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24957618

ABSTRACT

Escherichia coli displays O antigens on the outer membrane that play an important role in bacterial interactions with the environment. The O antigens of enterohemorrhagic E. coli O104 and O5 contain a Galß1-3GalNAc disaccharide at the reducing end of the repeating unit. Several other O antigens contain this disaccharide, which is identical to the mammalian O-glycan core 1 or the cancer-associated Thomsen-Friedenreich (TF) antigen. We identified the wbwC genes responsible for the synthesis of the disaccharide in E. coli serotypes O104 and O5. To functionally characterize WbwC, an acceptor substrate analog, GalNAcα-diphosphate-phenylundecyl, was synthesized. WbwC reaction products were isolated by high-pressure liquid chromatography and analyzed by mass spectrometry, nuclear magnetic resonance, galactosidase and O-glycanase digestion, and anti-TF antibody. The results clearly showed that the Galß1-3GalNAcα linkage was synthesized, confirming WbwCECO104 and WbwCECO5 as UDP-Gal:GalNAcα-diphosphate-lipid ß1,3-Gal-transferases. Sequence analysis revealed a conserved DxDD motif, and mutagenesis showed the importance of these Asp residues in catalysis. The purified enzymes require divalent cations (Mn(2+)) for activity and are specific for UDP-Gal and GalNAc-diphosphate lipid substrates. WbwC was inhibited by bis-imidazolium salts having aliphatic chains of 18 to 22 carbons. This work will help to elucidate mechanisms of polysaccharide synthesis in pathogenic bacteria and provide technology for vaccine synthesis.


Subject(s)
Enterohemorrhagic Escherichia coli/enzymology , Escherichia coli Proteins/metabolism , Galactosyltransferases/metabolism , Amino Acid Sequence , Enterohemorrhagic Escherichia coli/classification , Enterohemorrhagic Escherichia coli/genetics , Enterohemorrhagic Escherichia coli/metabolism , Escherichia coli Proteins/genetics , Galactosyltransferases/genetics , Gene Expression Regulation, Bacterial/physiology , Gene Expression Regulation, Enzymologic , Serotyping
8.
Bioorg Med Chem ; 21(21): 6788-95, 2013 Nov 01.
Article in English | MEDLINE | ID: mdl-24021581

ABSTRACT

Several analogs based on the lead structure of 1-(4-chlorobenzyl)-2-(pyrrolidin-1-ylmethyl)-1H-benzimidazole (clemizole) were synthesized and evaluated as novel inhibitors of heme oxygenase (HO). Many of the compounds were found to be potent and highly selective for the HO-2 isozyme (constitutive), and had substantially less inhibitory activity on the HO-1 isozyme (inducible). The compounds represent the first report of highly potent and selective inhibitors of HO-2 activity, and complement our suite of selective HO-1 inhibitors. The study has revealed many candidates based on the inhibition of heme oxygenases for potentially useful pharmacological and therapeutic applications.


Subject(s)
Benzimidazoles/chemistry , Benzimidazoles/chemical synthesis , Enzyme Inhibitors/chemical synthesis , Heme Oxygenase (Decyclizing)/antagonists & inhibitors , Animals , Benzimidazoles/metabolism , Brain/enzymology , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/metabolism , Heme Oxygenase (Decyclizing)/metabolism , Heme Oxygenase-1/antagonists & inhibitors , Heme Oxygenase-1/metabolism , Protein Binding , Rats , Structure-Activity Relationship
9.
Biochim Biophys Acta ; 1830(8): 4274-81, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23578692

ABSTRACT

BACKGROUND: Modifications of proteins by O-glycosylation determine many of the properties and functions of proteins. We wish to understand the mechanisms of O-glycosylation and develop inhibitors that could affect glycoprotein functions and alter cellular behavior. METHODS: We expressed recombinant soluble human Gal- and GlcNAc-transferases that synthesize the O-glycan cores 1 to 4 and are critical for the overall structures of O-glycans. We determined the properties and substrate specificities of these enzymes using synthetic acceptor substrate analogs. Compounds that were inactive as substrates were tested as inhibitors. RESULTS: Enzymes significantly differed in their recognition of the sugar moieties and aglycone groups of substrates. Core 1 synthase was active with glycopeptide substrates but GlcNAc-transferases preferred substrates with hydrophobic aglycone groups. Chemical modifications of the acceptors shed light on enzyme-substrate interactions. Core 1 synthase was weakly inhibited by its substrate analog benzyl 2-butanamido-2-deoxy-α-d-galactoside while two of the three GlcNAc-transferases were selectively and potently inhibited by bis-imidazolium salts which are not substrate analogs. CONCLUSIONS: This work delineates the distinct specificities and properties of the enzymes that synthesize the common O-glycan core structures 1 to 4. New inhibitors were found that could selectively inhibit the synthesis of cores 1, 2 and 3 but not core 4. GENERAL SIGNIFICANCE: These studies help our understanding of the mechanisms of action of enzymes critical for O-glycosylation. The results may be useful for the re-engineering of O-glycosylation to determine the roles of O-glycans and the enzymes critical for O-glycosylation, and for biotechnology with potential therapeutic applications.


Subject(s)
Galactosyltransferases/metabolism , N-Acetylglucosaminyltransferases/metabolism , Polysaccharides/biosynthesis , Galactosyltransferases/antagonists & inhibitors , Galactosyltransferases/chemistry , Glycosylation , Humans , N-Acetylglucosaminyltransferases/antagonists & inhibitors , N-Acetylglucosaminyltransferases/chemistry , Recombinant Proteins/antagonists & inhibitors , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Substrate Specificity
10.
Bioorg Med Chem ; 21(5): 1305-11, 2013 Mar 01.
Article in English | MEDLINE | ID: mdl-23375091

ABSTRACT

Galactosyltransferases (GalTs) extend the glycan chains of mammalian glycoproteins by adding Gal to terminal GlcNAc residues, and thus build the scaffolds for biologically important glycan structures. We have shown that positively charged bivalent imidazolium salts in which the two imidazolium groups are linked by an aliphatic chain of 20 or 22 carbons form potent inhibitors of purified human ß3-GalT5, using GlcNAcß-benzyl as acceptor substrate. The inhibitors are not substrate analogs and also inhibited a selected number of other glycosyltransferases. These bis-imidazolium compounds represent a new class of glycosyltransferase inhibitors with potential as anti-cancer and anti-inflammatory drugs.


Subject(s)
Enzyme Inhibitors/chemistry , Glycosyltransferases/antagonists & inhibitors , Imidazoles/chemistry , Anti-Inflammatory Agents/chemical synthesis , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/metabolism , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/chemistry , Antineoplastic Agents/metabolism , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/metabolism , Glycosyltransferases/metabolism , Humans , Imidazoles/chemical synthesis , Imidazoles/metabolism , Kinetics , Protein Binding , Salts/chemistry , Structure-Activity Relationship
11.
Bioorg Med Chem Lett ; 23(5): 1522-8, 2013 Mar 01.
Article in English | MEDLINE | ID: mdl-23375791

ABSTRACT

The interaction between DNA and members of series of bivalent imidazole compounds, monovalent and bivalent imidazolium compounds, and monovalent and bivalent tetrazolium compounds, which had been synthesized and evaluated for their anti-Plasmodium activity, has been examined using the displacement of SYBR Green I as a measure of competitive binding. The degree of interaction with DNA appears to be dependent on both hydrophobic and charge-pairing interactions.


Subject(s)
DNA/chemistry , Imidazoles/chemistry , Tetrazolium Salts/chemistry , Binding, Competitive , DNA/drug effects , Imidazoles/pharmacology , Tetrazolium Salts/pharmacology
12.
J R Soc Interface ; 10(78): 20120697, 2013 Jan 06.
Article in English | MEDLINE | ID: mdl-23097500

ABSTRACT

The development of heme oxygenase (HO) inhibitors, especially those that are isozyme-selective, promises powerful pharmacological tools to elucidate the regulatory characteristics of the HO system. It is already known that HO has cytoprotective properties and may play a role in several disease states, making it an enticing therapeutic target. Traditionally, the metalloporphyrins have been used as competitive HO inhibitors owing to their structural similarity with the substrate, heme. However, given heme's important role in several other proteins (e.g. cytochromes P450, nitric oxide synthase), non-selectivity is an unfortunate side-effect. Reports that azalanstat and other non-porphyrin molecules inhibited HO led to a multi-faceted effort to develop novel compounds as potent, selective inhibitors of HO. This resulted in the creation of non-competitive inhibitors with selectivity for HO, including a subset with isozyme selectivity for HO-1. Using X-ray crystallography, the structures of several complexes of HO-1 with novel inhibitors have been elucidated, which provided insightful information regarding the salient features required for inhibitor binding. This included the structural basis for non-competitive inhibition, flexibility and adaptability of the inhibitor binding pocket, and multiple, potential interaction subsites, all of which can be exploited in future drug-design strategies.


Subject(s)
Azoles/chemistry , Enzyme Inhibitors/chemistry , Heme Oxygenase-1/antagonists & inhibitors , Heme Oxygenase-1/chemistry , Heme Oxygenase-1/classification , Catalytic Domain , Crystallography, X-Ray , Humans , Structure-Activity Relationship
13.
Glycobiology ; 22(8): 1092-102, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22556057

ABSTRACT

The enterohemorrhagic O157 strain of Escherichia coli, which is one of the most well-known bacterial pathogens, has an O-antigen repeating unit structure with the sequence [-2-d-Rha4NAcα1-3-l-Fucα1-4-d-Glcß1-3-d-GalNAcα1-]. The O-antigen gene cluster of E. coli O157 contains the genes responsible for the assembly of this repeating unit and includes wbdN. In spite of cloning many O-antigen genes, biochemical characterization has been done on very few enzymes involved in O-antigen synthesis. In this work, we expressed the wbdN gene in E. coli BL21, and the His-tagged protein was purified. WbdN activity was characterized using the donor substrate UDP-[(14)C]Glc and the synthetic acceptor substrate GalNAcα-O-PO(3)-PO(3)-(CH(2))(11)-O-Ph. The enzyme product was isolated by high pressure liquid chromatography, and mass spectrometry showed that one Glc residue was transferred to the acceptor by WbdN. Nuclear magnetic resonance analysis of the product structure indicated that Glc was ß1-3 linked to GalNAc. WbdN contains a conserved DxD motif and requires divalent metal ions for full activity. WbdN activity has an optimal pH between 7 and 8 and is highly specific for UDP-Glc as the donor substrate. GalNAcα derivatives lacking the diphosphate group were inactive as substrates, and the enzyme did not transfer Glc to GlcNAcα-O-PO(3)-PO(3)-(CH(2))(11)-O-Ph. Our results illustrate that WbdN is a specific UDP-Glc:GalNAcα-diphosphate-lipid ß1,3-Glc-transferase. The enzyme is a target for the development of inhibitors to block O157-antigen synthesis.


Subject(s)
Escherichia coli O157/metabolism , Escherichia coli Proteins/metabolism , Glucosyltransferases/metabolism , O Antigens/metabolism , Uridine Diphosphate Glucose/metabolism , Chromatography, High Pressure Liquid , Escherichia coli O157/genetics , Escherichia coli Proteins/genetics , Glucosyltransferases/genetics , Magnetic Resonance Spectroscopy , Spectrometry, Mass, Electrospray Ionization , Substrate Specificity
14.
ChemMedChem ; 7(5): 897-902, 2012 May.
Article in English | MEDLINE | ID: mdl-22431362

ABSTRACT

Several α-(1H-imidazol-1-yl)-ω-phenylalkanes were synthesized and evaluated as novel inhibitors of heme oxygenase (HO). These compounds were found to be potent and selective for the stress-induced isozyme HO-1, showing mostly weak activity toward the constitutive isozyme HO-2. The introduction of an oxygen atom in the alkyl linker produced analogues with decreased potency toward HO-1, whereas the presence of a sulfur atom in the linker gave rise to analogues with greater potency toward HO-1 than the carbon-containing analogues. The most potent compounds studied contained a five-atom linker between the imidazolyl and phenyl moieties, whereas the most HO-1-selective compounds contained a four-atom linker between these groups. The compounds with a five-atom linker containing a heteroatom (O or S) were found to be the most potent inhibitors of HO-2; 1-(N-benzylamino)-3-(1H-imidazol-1-yl)propane dihydrochloride, with a nitrogen atom in the linker, was found to be inactive.


Subject(s)
Alkanes/chemical synthesis , Heme Oxygenase-1/antagonists & inhibitors , Imidazoles/chemical synthesis , Oxygen/chemistry , Phenol/chemical synthesis , Sulfur/chemistry , Alkanes/chemistry , Alkanes/pharmacology , Animals , Heme Oxygenase (Decyclizing)/antagonists & inhibitors , Imidazoles/chemistry , Imidazoles/pharmacology , Inhibitory Concentration 50 , Microsomes/enzymology , Molecular Structure , Phenol/chemistry , Phenol/pharmacology , Rats
15.
PLoS One ; 7(1): e29514, 2012.
Article in English | MEDLINE | ID: mdl-22276118

ABSTRACT

The development of heme oxygenase (HO) inhibitors is critical in dissecting and understanding the HO system and for potential therapeutic applications. We have established a program to design and optimize HO inhibitors using structure-activity relationships in conjunction with X-ray crystallographic analyses. One of our previous complex crystal structures revealed a putative secondary hydrophobic binding pocket which could be exploited for a new design strategy by introducing a functional group that would fit into this potential site. To test this hypothesis and gain further insights into the structural basis of inhibitor binding, we have synthesized and characterized 1-(1H-imidazol-1-yl)-4,4-diphenyl-2-butanone (QC-308). Using a carbon monoxide (CO) formation assay on rat spleen microsomes, the compound was found to be ∼15 times more potent (IC(50) = 0.27±0.07 µM) than its monophenyl analogue, which is already a potent compound in its own right (QC-65; IC(50) = 4.0±1.8 µM). The crystal structure of hHO-1 with QC-308 revealed that the second phenyl group in the western region of the compound is indeed accommodated by a definitive secondary proximal hydrophobic pocket. Thus, the two phenyl moieties are each stabilized by distinct hydrophobic pockets. This "double-clamp" binding offers additional inhibitor stabilization and provides a new route for improvement of human heme oxygenase inhibitors.


Subject(s)
Enzyme Inhibitors/chemistry , Heme Oxygenase-1/antagonists & inhibitors , Heme Oxygenase-1/chemistry , Crystallography, X-Ray , Enzyme Inhibitors/metabolism , Enzyme Inhibitors/pharmacology , Heme Oxygenase-1/metabolism , Humans , Molecular Structure , Protein Binding , Protein Structure, Secondary , Protein Structure, Tertiary
16.
Bioorg Med Chem ; 19(21): 6525-42, 2011 Nov 01.
Article in English | MEDLINE | ID: mdl-21944972

ABSTRACT

A series of compounds containing bivalent imidazolium rings and one triazolium analog were synthesized and evaluated for their ability to inhibit the replication of Plasmodium falciparum cultures. The activity and selectivity of the compounds for P. falciparum cultures were found to depend on the presence of electron-deficient rings that were spaced an appropriate distance apart. The activity of the compounds was not critically dependent on the nature of the linker between the electron-deficient rings, an observation that suggests that the rings were responsible for the primary interaction with the molecular target of the compounds in the parasite. The bivalent imidazolium and triazolium compounds disrupted the process whereby merozoites gain entry into erythrocytes, however, they did not appear to prevent merozoites from forming. The compounds were also found to be active in a murine Plasmodium berghei infection, a result consistent with the compounds specifically interacting with a parasite component that is required for replication and is conserved between two Plasmodium species.


Subject(s)
Antimalarials/chemistry , Imidazoles/pharmacology , Malaria, Falciparum/drug therapy , Plasmodium falciparum/drug effects , Triazoles/pharmacology , Animals , Antimalarials/chemical synthesis , Antimalarials/pharmacology , Disease Models, Animal , Erythrocytes/parasitology , Imidazoles/chemical synthesis , Imidazoles/chemistry , Magnetic Resonance Spectroscopy , Mass Spectrometry , Mice , Plasmodium berghei/drug effects , Structure-Activity Relationship , Triazoles/chemical synthesis , Triazoles/chemistry
17.
J Pharmacol Toxicol Methods ; 63(1): 79-88, 2011.
Article in English | MEDLINE | ID: mdl-20561893

ABSTRACT

INTRODUCTION: Sensitive assays for measuring heme oxygenase activity have been based on the gas-chromatographic detection of carbon monoxide using elaborate, expensive equipment. The present study describes a rapid and convenient method for screening imidazole-containing candidates for inhibitory activity against heme oxygenase using a plate reader, based on the spectroscopic evaluation of heme degradation. METHODS: A PowerWave XS plate reader was used to monitor the absorbance (as a function of time) of heme bound to purified truncated human heme oxygenase-1 (hHO-1) in the individual wells of a standard 96-well plate (with or without the addition of a test compound). The degradation of heme by heme oxygenase-1 was initiated using l-ascorbic acid, and the collected relevant absorbance data were analyzed by three different methods to calculate the percent control activity occurring in wells containing test compounds relative to that occurring in control wells with no test compound present. RESULTS: In the cases of wells containing inhibitory compounds, significant shifts in λ(max) from 404 to near 412 nm were observed as well as a decrease in the rate of heme degradation relative to that of the control. Each of the three methods of data processing (overall percent drop in absorbance over 1.5h, initial rate of reaction determined over the first 5 min, and estimated pseudo first-order reaction rate constant determined over 1.5h) gave similar and reproducible results for percent control activity. The fastest and easiest method of data analysis was determined to be that using initial rates, involving data acquisition for only 5 min once reactions have been initiated using l-ascorbic acid. DISCUSSION: The results of the study demonstrate that this simple assay based on the spectroscopic detection of heme represents a rapid, convenient method to determine the relative inhibitory activity of candidate compounds, and is useful in quickly screening a series or library of compounds for heme oxygenase inhibition.


Subject(s)
Enzyme Inhibitors/pharmacology , Heme Oxygenase-1/antagonists & inhibitors , Imidazoles/pharmacology , Ascorbic Acid/metabolism , Cell Line , Heme/metabolism , Heme Oxygenase-1/metabolism , Humans , Imidazoles/chemical synthesis , Imidazoles/pharmacokinetics
18.
ChemMedChem ; 5(9): 1541-55, 2010 Sep 03.
Article in English | MEDLINE | ID: mdl-20652928

ABSTRACT

Previous studies by our research group have been concerned with the design of selective inhibitors of heme oxygenases (HO-1 and HO-2). The majority of these were based on a four-carbon linkage of an azole, usually an imidazole, and an aromatic moiety. In the present study, we designed and synthesized a series of inhibition candidates containing a shorter linkage between these groups, specifically, a series of 1-aryl-2-(1H-imidazol-1-yl/1H-1,2,4-triazol-1-yl)ethanones and their derivatives. As regards HO-1 inhibition, the aromatic moieties yielding best results were found to be halogen-substituted residues such as 3-bromophenyl, 4-bromophenyl, and 3,4-dichlorophenyl, or hydrocarbon residues such as 2-naphthyl, 4-biphenyl, 4-benzylphenyl, and 4-(2-phenethyl)phenyl. Among the imidazole-ketones, five (36-39, and 44) were found to be very potent (IC(50)<5 muM) toward both isozymes. Relative to the imidazole-ketones, the series of corresponding triazole-ketones showed four compounds (54, 55, 61, and 62) having a selectivity index >50 in favor of HO-1. In the case of the azole-dioxolanes, two of them (80 and 85), each possessing a 2-naphthyl moiety, were found to be particularly potent and selective HO-1 inhibitors. Three non-carbonyl analogues (87, 89, and 91) of 1-(4-chlorophenyl)-2-(1H-imidazol-1-yl)ethanone were found to be good inhibitors of HO-1. For the first time in our studies, two azole-based inhibitors (37 and 39) were found to exhibit a modest selectivity index in favor of HO-2. The present study has revealed additional candidates based on inhibition of heme oxygenases for potentially useful pharmacological and therapeutic applications.


Subject(s)
Azoles/chemistry , Heme Oxygenase (Decyclizing)/antagonists & inhibitors , Heme Oxygenase-1/antagonists & inhibitors , Animals , Azoles/chemical synthesis , Dioxolanes/chemistry , Heme Oxygenase (Decyclizing)/metabolism , Heme Oxygenase-1/metabolism , Imidazoles/chemistry , Rats , Structure-Activity Relationship , Triazoles/chemistry
19.
Bioorg Med Chem ; 18(16): 6184-96, 2010 Aug 15.
Article in English | MEDLINE | ID: mdl-20634079

ABSTRACT

We have previously reported that tetrazolium salts were both potent and specific inhibitors of Plasmodium replication, and that they appear to interact with a parasite component that is both essential and conserved. The use of tetrazolium salts in vivo is limited by the potential reduction of the tetrazolium ring to form an inactive, neutral acyclic formazan. To address this issue imidazolium and triazolium salts were synthesized and evaluated as Plasmodium inhibitors. Many of the imidazolium and triazolium salts were highly potent with active concentrations in the nanomolar range in Plasmodium falciparum cultures, and specific to Plasmodium with highly favorable therapeutic ratios. The results corroborate our hypothesis that an electron-deficient core is required so that the compound may thereby interact with a negatively charged moiety on the parasite merozoite; the side groups in the compound then form favorable interactions with adjacent parasite components and thereby determine both the potency and selectivity of the compound.


Subject(s)
Antimalarials/pharmacology , Imidazoles/chemistry , Imidazoles/pharmacology , Plasmodium falciparum/drug effects , Tetrazolium Salts/chemistry , Tetrazolium Salts/pharmacology , Animals , CHO Cells , Cricetinae , Cricetulus , Humans , Malaria, Falciparum/drug therapy , Structure-Activity Relationship
20.
Can J Physiol Pharmacol ; 88(4): 480-6, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20555417

ABSTRACT

Recombinant truncated forms of heme oxygenase-1 and -2 (HO-1 and HO-2) were compared with their crude microsomal counterparts from brain and spleen tissue of adult male rats with respect to their inhibition by azole-based, nonporphyrin HO inhibitors. The drugs tested were an imidazole-alcohol, an imidazole-dioxolane, and a triazole-ketone. Both the recombinant and crude forms of HO-2 were similarly inhibited by the 3 drugs. The crude microsomal spleen form of HO-1 was more susceptible to inhibition than was the truncated recombinant form. This difference is attributed to the extra amino acids in the full-length enzyme. These observations may be relevant in the design of drugs as inhibitors of HO and other membrane proteins.


Subject(s)
Enzyme Inhibitors/pharmacology , Heme Oxygenase (Decyclizing)/antagonists & inhibitors , Heme Oxygenase-1/antagonists & inhibitors , Imidazoles/pharmacology , Triazoles/pharmacology , Animals , Brain/enzymology , Enzyme Inhibitors/chemistry , Heme Oxygenase (Decyclizing)/chemistry , Heme Oxygenase-1/chemistry , Imidazoles/chemistry , In Vitro Techniques , Male , Microsomes/enzymology , Rats , Rats, Sprague-Dawley , Recombinant Proteins/antagonists & inhibitors , Spleen/enzymology , Triazoles/chemistry
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