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1.
Plant Biol (Stuttg) ; 15(4): 713-22, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23452019

ABSTRACT

When plants are exposed to stress, generation of reactive oxygen species (ROS) is often one of the first responses. In order to survive, cells attempt to down-regulate the production of ROS, while at the same time scavenging ROS. Photorespiration is now appreciated as an important part of stress responses in green tissues for preventing ROS accumulation. Photorespiratory reactions can dissipate excess reducing equivalents and energy either directly (using ATP, NAD(P)H and reduced ferredoxin) or indirectly (e.g., via alternative oxidase (AOX) and providing an internal CO2 pool). Photorespiration, however, is also a source of H2 O2 that is possibly involved in signal transduction, resulting in modulation of gene expression. We propose that photorespiration can assume a major role in the readjustment of redox homeostasis. Protection of photosynthesis from photoinhibition through photorespiration is well known. Photorespiration can mitigate oxidative stress under conditions of drought/water stress, salinity, low CO2 and chilling. Adjustments to even mild disturbances in redox status, caused by a deficiency in ascorbate, AOX or chloroplastic NADP-malate dehydrogenase, comprise increases in photorespiratory components such as catalase, P-protein of glycine decarboxylase complex (GDC) and glycine content. The accumulation of excess reducing equivalents or ROS in plant cells also affects mitochondria. Therefore, a strong interaction between the chloroplast redox status and photorespiration is not surprising, but highlights interesting properties evident in plant cells. We draw attention to the fact that a complex network of multiple and dynamic systems, including photorespiration, prevents oxidative damage while optimising photosynthesis. Further experiments are necessary to identify and validate the direct targets of redox signals among photorespiratory components.


Subject(s)
Acclimatization , Gene Expression Regulation, Plant , Plants/metabolism , Reactive Oxygen Species/metabolism , Carbon Dioxide/metabolism , Cell Respiration , Droughts , Homeostasis , Light , Organelles/metabolism , Oxidation-Reduction , Oxidative Stress , Photosynthesis , Plants/genetics , Plants/radiation effects , Signal Transduction , Water/metabolism
2.
J Appl Microbiol ; 109(1): 79-90, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20002867

ABSTRACT

AIMS: Detailed knowledge about the enzymes responsible for conversion of C(3) and C(4) compounds will be helpful to establish the bacterial strain Ralstonia eutropha as platform for the production of biotechnologically interesting compounds. Although various studies about these enzymes were accomplished in the past, some contradicting information about the enzyme pattern in this bacterium still exists. To resolve these discrepancies, the C(3) /C(4) metabolism was reinvestigated after the genome sequence of this bacterium became available. METHODS AND RESULTS: In silico analysis of genome sequence revealed putative genes coding for NAD(P)(+) -dependent malic enzymes (Mae), phoshoenolpyruvate carboxykinase (Pck), phosphoenolpyruvate carboxylase (Ppc), phosphoenolpyruvate synthase (Pps) and pyruvate carboxylase (Pyc). Reverse transcription PCR revealed constitutive expression of mae and pck genes, whereas no transcripts of pyc and ppc were found. Expression of active NADP(+) -dependent MaeB and Pck and absence of Pyc and Ppc was confirmed by spectrophotometric enzyme assays. CONCLUSIONS: The data reported in this study suggest that two enzymes, (i) MaeB and (ii) Pck, mediate between the C(3) and C(4) intermediates in R. eutropha H16. The enzymatic conversion of pyruvate into phosphoenolpyruvate (PEP) is catalysed by Pps, and an NADH(+) -dependent Mdh mediates the reversible conversion of malate and oxaloacetate. SIGNIFICANCE AND IMPACT OF THE STUDY: An increased knowledge of the enzymes mediating between C(3) and C(4) intermediates in R. eutropha will facilitate metabolic engineering.


Subject(s)
Bacterial Proteins/metabolism , Carbon/metabolism , Cupriavidus necator/enzymology , Amino Acid Sequence , Bacterial Proteins/genetics , Cloning, Molecular , Cupriavidus necator/genetics , Genes, Bacterial , Genome, Bacterial , Malates/metabolism , Molecular Sequence Data , Oxaloacetic Acid/metabolism , Phosphoenolpyruvate/metabolism , Pyruvic Acid/metabolism , RNA, Bacterial/genetics
3.
J Bacteriol ; 185(21): 6241-54, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14563858

ABSTRACT

Oral streptococci, such as Streptococcus gordonii, are the predominant early colonizers that initiate biofilm formation on tooth surfaces. Investigation of an S. gordonii::Tn917-lac biofilm-defective mutant isolated by using an in vitro biofilm formation assay showed that the transposon insertion is near the 3' end of an open reading frame (ORF) encoding a protein homologous to Streptococcus mutans FruK. Three genes, fruR, fruK, and fruI, were predicted to encode polypeptides that are part of the fructose phosphotransferase system (PTS) in S. gordonii. These proteins, FruR, FruK, and FruI, are homologous to proteins encoded by the inducible fruRKI operon of S. mutans. In S. mutans, FruR is a transcriptional repressor, FruK is a fructose-1-phosphate kinase, and FruI is the fructose-specific enzyme II (fructose permease) of the phosphoenolpyruvate-dependent sugar PTS. Reverse transcription-PCR confirmed that fruR, fruK, and fruI are cotranscribed as an operon in S. gordonii, and the transposon insertion in S. gordonii fruK::Tn917-lac resulted in a nonpolar mutation. Nonpolar inactivation of either fruK or fruI generated by allelic replacement resulted in a biofilm-defective phenotype, whereas a nonpolar mutant with an inactivated fruR gene retained the ability to form a biofilm. Expression of fruK, as measured by the beta-galactosidase activity of the fruK::Tn917-lac mutant, was observed to be growth phase dependent and was enhanced when the mutant was grown in media with high levels of fructose, sucrose, xylitol, and human serum, indicating that the fructose PTS operon was fructose and xylitol inducible, similar to the S. mutans fructose PTS. The induction by fructose was inhibited by the presence of glucose, indicating that glucose is able to catabolite repress fruK expression. Nonpolar inactivation of the fruR gene in the fruK::Tn917-lac mutant resulted in a greater increase in beta-galactosidase activity when the organism was grown in media supplemented with fructose, confirming that fruR is a transcriptional repressor of the fructose PTS operon. These results suggest that the regulation of fructose transport and metabolism in S. gordonii is intricately tied to carbon catabolite control and the ability to form biofilms. Carbon catabolite control, which modulates carbon flux in response to environmental nutritional levels, appears to be important in the regulation of bacterial biofilms.


Subject(s)
Biofilms/growth & development , Fructose/metabolism , Operon , Phosphoenolpyruvate Sugar Phosphotransferase System/genetics , Streptococcus/genetics , Base Sequence , Culture Media , DNA Transposable Elements/genetics , Genetic Complementation Test , Membrane Transport Proteins/genetics , Molecular Sequence Data , Monosaccharide Transport Proteins , Mutation , Phosphofructokinase-1/biosynthesis , Phylogeny , Sequence Alignment , Streptococcus/physiology , Xylitol
4.
J Bacteriol ; 185(9): 2887-900, 2003 May.
Article in English | MEDLINE | ID: mdl-12700268

ABSTRACT

Pioneer oral bacteria, including Streptococcus gordonii, initiate the formation of oral biofilms on tooth surfaces, which requires differential expression of genes that recognize unique environmental cues. An S. gordonii::Tn917-lac biofilm-defective mutant was isolated by using an in vitro biofilm formation assay. Subsequent inverse PCR and sequence analyses identified the transposon insertion to be near the 3' end of an open reading frame (ORF) encoding a protein homologous to a Streptococcus pneumoniae repressor, AdcR. The S. gordonii adc operon, consisting of the four ORFs adcR, adcC, adcB, and adcA, is homologous to the adc operon of S. pneumoniae, which plays a role in zinc and/or manganese transport and genetic competence in S. pneumoniae. AdcR is a metal-dependent repressor protein containing a putative metal-binding site, AdcC contains a consensus-binding site for ATP, AdcB is a hydrophobic protein with seven hydrophobic membrane-spanning regions, and AdcA is a lipoprotein permease with a putative metal-binding site. The three proteins (AdcC through -A) are similar to those of the binding-lipoprotein-dependent transport system of gram-positive bacteria. Reverse transcriptase PCR confirmed that adcRCBA are cotranscribed as an operon in S. gordonii and that the transposon insertion in S. gordonii adcR::Tn917-lac had resulted in a polar mutation. Expression of adcR, measured by the beta-galactosidase activity of the adcR::Tn917-lac mutant, was growth phase dependent and increased when the mutant was grown in media with high levels of manganese (>1 mM) and to a lesser extent in media with zinc, indicating that AdcR may be a regulator at high levels of extracellular manganese. A nonpolar inactivation of adcR generated by allelic replacement resulted in a biofilm- and competence-defective phenotype. The biofilm-defective phenotype observed suggests that AdcR is an active repressor when synthesized and acts at a distant site(s) on the chromosome. Thus, the adc operon is involved in manganese acquisition in S. gordonii and manganese homeostasis and appears to modulate sessile growth in this bacterium.


Subject(s)
ATP-Binding Cassette Transporters/genetics , Biofilms/growth & development , Gene Expression Regulation, Bacterial , Manganese/metabolism , Operon/physiology , Streptococcus/physiology , ATP-Binding Cassette Transporters/metabolism , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Bacterial Proteins/genetics , Biological Transport , Culture Media , DNA Transposable Elements , Homeostasis , Membrane Proteins/genetics , Molecular Sequence Data , Mutagenesis, Insertional , Open Reading Frames , Repressor Proteins/genetics , Repressor Proteins/metabolism , Sequence Alignment , Streptococcus/genetics , Zinc/metabolism
5.
Appl Microbiol Biotechnol ; 55(5): 547-55, 2001 May.
Article in English | MEDLINE | ID: mdl-11414319

ABSTRACT

The triacylglycerol (TAG)-accumulating bacterium Rhodococcus opacus strain PD630 was investigated with respect to the fermentative production of TAGs consisting of an unusually high fraction of fatty acids with an odd-number of carbon atoms and unsaturated monoenic fatty acids from sugar beet molasses and sucrose. Fed-batch fermentations were optimized at the 30-1 scale in a stirred tank bioreactor at 30 degrees C using a mineral salts medium, which contained sugar beet molasses and sucrose as sole carbon sources. Approximately 37.5 g cell dry matter (CDM) per liter was the highest cell density that was obtained at that scale with a TAG content in the cells of 52%. This fermentative process was also applied to a 500-1 pilot-plant scale. Cell densities as high as 18.4 g CDM per liter were obtained, and 42% of the sucrose present in the medium was converted into cell mass which consisted of 38.4% TAGs.


Subject(s)
Lipids/biosynthesis , Rhodococcus/growth & development , Rhodococcus/metabolism , Biotechnology , Carbon/metabolism , Colony Count, Microbial , Fermentation , Lipids/chemistry , Pilot Projects , Rhodococcus/cytology , Triglycerides/biosynthesis , Triglycerides/chemistry
7.
Onkologie ; 5 Suppl: 46-51, 1982 Aug.
Article in German | MEDLINE | ID: mdl-6752791

ABSTRACT

Looking for an alternative treatment for patients with advanced breast carcinoma resistant to the common treatment regimens, vindesine, carmustine (BCNU) and tamoxifen were used for further treatment. 27 patients were admitted to a two-step-treatment-schedule including a step I with tamoxifen alone and a step II with vindesine, carmustine and tamoxifen. Within the step I with tamoxifen 7 of 14 patients (50%) and within the consecutive step II with vindesine, carmustine and tamoxifen 4 of 20 patients (20%) responded to this regimen. The mean duration of the response was + 7.4 and + 9.0 months, respectively. The results suggest that effective palliation is still possible in some patients suffering from progressive disease after therapy with vincristine + adriamycin + cyclophosphamide and 5-fluorouracil + methotrexate + cyclophosphamide.


Subject(s)
Antineoplastic Agents/administration & dosage , Breast Neoplasms/drug therapy , Adult , Aged , Antineoplastic Agents/therapeutic use , Carmustine/administration & dosage , Carmustine/therapeutic use , Drug Therapy, Combination , Female , Humans , Middle Aged , Neoplasm Metastasis , Tamoxifen/administration & dosage , Tamoxifen/therapeutic use , Vinblastine/administration & dosage , Vinblastine/analogs & derivatives , Vinblastine/therapeutic use , Vindesine
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