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1.
Phys Chem Chem Phys ; 2024 Jul 10.
Article in English | MEDLINE | ID: mdl-38985163

ABSTRACT

The microwave spectra of five isotopologues of phenylacetylene⋯methanol complex, C6H5CCH⋯CH3OH, C6H5CCH⋯CH3OD, C6H5CCH⋯CD3OD, C6H5CCD⋯CH3OH and C6H5CCH⋯13CH3OH, have been observed through Fourier transform microwave spectroscopy. Rotational spectra unambiguously unveil a specific structural arrangement characterised by dual interactions between the phenylacetylene and methanol. CH3OH serves as a hydrogen bond donor to the acetylenic π-cloud while concurrently accepting a hydrogen bond from the ortho C-H group of the PhAc moiety. The fitted rotational constants align closely with the structural configuration computed at the B3LYP-D3/aug-cc-pVDZ level of theory. The transitions of all isotopologues exhibit doublets owing to the methyl group's internal rotation within the methanol molecule. Comprehensive computational analyses, including natural bond orbital (NBO) analysis, atoms in molecules (AIM) theory, and non-covalent interactions (NCI) index plots, reveal the coexistence of both O-H⋯π and C-H⋯O hydrogen bonds within the complex. Symmetry adapted perturbation theory with density functional theory (SAPT-DFT) calculations performed on the experimentally determined geometry provide an insight into the prominent role of electrostatic interactions in stabilising the overall structural arrangement.

2.
J Chem Phys ; 160(21)2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38836784

ABSTRACT

A number of internal rotation codes can deal with the combination of one or two internal rotors with one 14N quadrupole nucleus, but once it comes to two 14N nuclei, no such code is available even for the case of one internal rotor. We present here the extension of our internal rotor program called BELGI-2N using the rho-axis method global approach to deal with compounds containing one methyl rotor and two weakly coupling 14N nuclei. To test our new code, we applied it to the microwave data recorded for N-methylimidazole, 2-methylimidazole, 4-methylimidazole, and 5-methylimidazole using a chirped-pulse Fourier transform microwave spectrometer in the 7.0-18.5 GHz frequency range. Compared to the previously published study, BELGI-2N was able to (i) significantly increase the number of assigned and fitted lines, (ii) fit the complete datasets considering both the internal rotation and the 14N nuclear quadrupole coupling effects simultaneously, and (iii) achieve standard deviations within the measurement accuracy for all methylimidazole isomers.

3.
Chemphyschem ; 25(8): e202400011, 2024 Apr 16.
Article in English | MEDLINE | ID: mdl-38314654

ABSTRACT

Broadband microwave spectra of the isolated 2-ethylthiazole molecule, and complexes of 2-ethylthiazole⋅⋅⋅H2O and 2-ethylthiazole⋅⋅⋅(H2O)2 have been recorded by probing a gaseous sample containing low concentrations of 2-ethylthiazole and water within a carrier gas undergoing supersonic expansion. The identified conformer of the isolated 2-ethylthiazole molecule and the 2-ethylthiazole sub-unit within each of 2-ethylthiazole⋅⋅⋅H2O and 2-ethylthiazole⋅⋅⋅(H2O)2 have C1 symmetry. The angle that defines rotation of the ethyl group relative to the plane of the thiazole ring, ∠(S-C2-C6-C7), is -98.6(10)° within the isolated 2-ethylthiazole molecule. Analysis of molecular geometries and non-covalent interactions reveals each hydrate complex contains a non-linear primary, N⋅⋅⋅Hb-O, hydrogen bond between an O-H of H2O and the nitrogen atom while the O atom of the water molecule(s) interacts weakly with the ethyl group. The ∠(Hb⋅⋅⋅N-C2) parameter, which defines the position of the H2O molecule relative to the thiazole ring, is found to be significantly greater for 2-ethylthiazole⋅⋅⋅H2O than for thiazole⋅⋅⋅H2O. The distance between the O atoms is determined to be 2.894(21) Å within the dihydrate complex which is shorter than observed within the isolated water dimer. The primary hydrogen bond within 2-ethylthiazole⋅⋅⋅(H2O)2 is shorter and stronger than that in 2-ethylthiazole⋅⋅⋅H2O as a result of cooperative hydrogen bonding effects.

4.
J Phys Chem A ; 127(39): 8133-8145, 2023 Oct 05.
Article in English | MEDLINE | ID: mdl-37751499

ABSTRACT

The pure rotational spectra of 4-methylthiazole···H2O and 5-methylthiazole···H2O were recorded by chirped-pulse Fourier transform microwave (CP-FTMW) spectroscopy. Each complex was generated within the rotationally cold environment of a gas sample undergoing supersonic expansion in the presence of an argon buffer gas. The spectra of five isotopologues of each complex have been measured and analyzed to determine the rotational constants, A0, B0, and C0; centrifugal distortion constants, DJ, DJK, and d1; nuclear quadrupole coupling constants, χaa(N3) and [χbb(N3) - χcc(N3)]; and parameters describing the internal rotation of the CH3 group, V3 and ∠(i,b). The experimentally deduced parameters were obtained using the XIAM and the BELGI-Cs-hyperfine code. For each complex, parameters in the molecular geometry are fitted to experimentally determined moments of inertia. DFT calculations have been performed at the ωB97X-D/aug-cc-pVQZ level in support of the experiments. Each complex contains two hydrogen bonds; a comparatively strong, primary interaction between the N of thiazole and an O-H of H2O, and a weaker, secondary interaction between O and either the hydrogen atom attached to C2 (in 5-methylthiazole···H2O) or the CH3 group attached to C4 (in 4-methylthiazole···H2O). The barrier to internal rotation of the CH3 group, V3, is slightly lower for 4-methylthiazole···H2O (XIAM result is 340.05(56) cm-1) than that for the 4-methylthiazole monomer (357.6 cm-1). This is likely to be a result of internal charge redistribution within the 4-methylthiazole subunit following its coordination by H2O. At the precision of the experiments, V3 of 5-methylthiazole···H2O (XIAM result is 325.16(38) cm-1) is not significantly different from V3 of the 5-methylthiazole monomer (332.0 cm-1).

5.
J Chem Phys ; 158(11): 114307, 2023 Mar 21.
Article in English | MEDLINE | ID: mdl-36948828

ABSTRACT

Two isomers of a complex formed between thiazole and two water molecules, thi⋯(H2O)2, have been identified through Fourier transform microwave spectroscopy between 7.0 and 18.5 GHz. The complex was generated by the co-expansion of a gas sample containing trace amounts of thiazole and water in an inert buffer gas. For each isomer, rotational constants, A0, B0, and C0; centrifugal distortion constants, DJ, DJK, d1, and d2; and nuclear quadrupole coupling constants, χaa(N) and [χbb(N) - χcc(N)], have been determined through fitting of a rotational Hamiltonian to the frequencies of observed transitions. The molecular geometry, energy, and components of the dipole moment of each isomer have been calculated using Density Functional Theory (DFT). The experimental results for four isotopologues of isomer I allow for accurate determinations of atomic coordinates of oxygen atoms by r0 and rs methods. Isomer II has been assigned as the carrier of an observed spectrum on the basis of very good agreement between DFT-calculated results and a set of spectroscopic parameters (including A0, B0, and C0 rotational constants) determined by fitting to measured transition frequencies. Non-covalent interaction and natural bond orbital analyses reveal that two strong hydrogen bonding interactions are present within each of the identified isomers of thi⋯(H2O)2. The first of these binds H2O to the nitrogen of thiazole (OH⋯N), and the second binds the two water molecules (OH⋯O). A third, weaker interaction binds the H2O sub-unit to the hydrogen atom that is attached to C2 (for isomer I) or C4 (for isomer II) of the thiazole ring (CH⋯O).

6.
Phys Chem Chem Phys ; 24(20): 12354-12362, 2022 May 25.
Article in English | MEDLINE | ID: mdl-35551286

ABSTRACT

Broadband microwave spectra have been recorded between 7.0 and 18.5 GHz for N-methylimidazole⋯H2O and 2-methylimidazole⋯H2O complexes. Each complex was generated by co-expansion of low concentrations of methylimidazole and H2O in argon buffer gas. The rotational spectra of five isotopologues of each complex have been assigned and analysed to determine rotational constants (A0, B0, C0), centrifugal distortion constants (DJ, DJK) and parameters that describe the internal rotation of the CH3 group. The results allow the determination of parameters in the (r0) molecular geometry of each complex. H2O is the hydrogen bond donor and the pyridinic nitrogen of imidazole is the hydrogen bond acceptor in each case. The ∠(O-Hb⋯N3) angles are 177(5)° and 166.3(28)° for N-methylimidazole⋯H2O and 2-methylimidazole⋯H2O respectively. These results are consistent with the presence of a weak electrostatic interaction between the oxygen atom of H2O and the hydrogen atom (or CH3 group) attached to the C2 carbon atom of imidazole, and with the results of density functional theory calculations. The (V3) barrier to internal rotation of the CH3 group within N-methylimidazole⋯H2O is essentially unchanged from the value of this parameter for the N-methylimidazole monomer. The same parameter is significantly higher for the 2-methylimidazole⋯H2O complex than for the 2-methylimidazole monomer as a consequence of the weak electrostatic interaction between the O atom and the CH3 group of 2-methylimidazole.

7.
Am J Physiol Cell Physiol ; 319(5): C885-C894, 2020 11 01.
Article in English | MEDLINE | ID: mdl-32877217

ABSTRACT

Tendon is a dense connective tissue that stores and transmits forces between muscles and bones. Cellular heterogeneity is increasingly recognized as an important factor in the biological basis of tissue homeostasis and disease, yet little is known about the diversity of cell types that populate tendon. To address this, we determined the heterogeneity of cell populations within mouse Achilles tendons using single-cell RNA sequencing. In assembling a transcriptomic atlas of Achilles tendons, we identified 11 distinct types of cells, including three previously undescribed populations of tendon fibroblasts. Prior studies have indicated that pericytes, which are found in the vasculature of tendons, could serve as a potential source of progenitor cells for adult tendon fibroblasts. Using trajectory inference analysis, we provide additional support for the notion that pericytes are likely to be at least one of the progenitor cell populations for the fibroblasts that compose adult tendons. We also modeled cell-cell interactions and identified previously undescribed ligand-receptor signaling interactions involved in tendon homeostasis. Our novel and interactive tendon atlas highlights previously underappreciated heterogeneity between and within tendon cell populations. The atlas also serves as a resource to further the understanding of tendon extracellular matrix assembly and maintenance and in the design of therapies for tendinopathies.


Subject(s)
Achilles Tendon/metabolism , Endothelial Cells/metabolism , Fibroblasts/metabolism , Neurons/metabolism , Pericytes/metabolism , Stem Cells/metabolism , Transcriptome , Achilles Tendon/cytology , Animals , Basic Helix-Loop-Helix Transcription Factors/genetics , Basic Helix-Loop-Helix Transcription Factors/metabolism , Calcium-Binding Proteins/genetics , Calcium-Binding Proteins/metabolism , Cell Communication/genetics , Chondroitin Sulfate Proteoglycans/genetics , Chondroitin Sulfate Proteoglycans/metabolism , Collagen/genetics , Collagen/metabolism , Endothelial Cells/cytology , Extracellular Matrix/metabolism , Extracellular Matrix Proteins/genetics , Extracellular Matrix Proteins/metabolism , Fibroblasts/cytology , Gene Expression Profiling , Gene Expression Regulation , Homeodomain Proteins/genetics , Homeodomain Proteins/metabolism , Male , Mice , Mice, Inbred C57BL , Mice, Transgenic , Neurons/cytology , Pericytes/cytology , Sequence Analysis, RNA , Signal Transduction , Single-Cell Analysis , Stem Cells/cytology
8.
J Phys Chem A ; 124(13): 2649-2659, 2020 Apr 02.
Article in English | MEDLINE | ID: mdl-32141751

ABSTRACT

Laser vaporization of imidazole in the presence of an argon buffer gas has allowed the generation and isolation of two isomers of an imidazole monohydrate complex, denoted herein as imid···H2O and H2O···imid, within a gas sample undergoing supersonic expansion. Imidazole and water are respectively proton-accepting and proton-donating in imid···H2O, but these roles are reversed in the H2O···imid complex. Both isomers have been characterized by chirped-pulse Fourier transform microwave spectroscopy between 7.0 and 18.5 GHz. The ground-state rotational spectra of four isotopologues of imid···H2O and three isotopologues of H2O···imid have been measured. All spectra have been assigned and fitted to determine rotational (A0, B0, C0), centrifugal distortion (DJ, DJK), and nuclear quadrupole coupling constants (χaa(N1), [χbb(N1) - χcc(N1)], χaa(N3), and [χbb(N3) - χcc(N3)]). Structural parameters (r0 and rs) have been accurately determined from measured rotational constants for each isomer. The imid···H2O complex contains a nonlinear hydrogen bond (∠(O-Hb···N3) = 172.1(26)° in the experimentally determined, r0 geometry) between the pyridinic nitrogen of imidazole and a hydrogen atom of H2O. The DFT calculations find that the H2O···imid complex also contains a nonlinear hydrogen bond between the oxygen atom of water and the hydrogen attached to the pyrrolic nitrogen of imidazole (∠(O···H1-N1) = 174.7°). Two states observed in the spectrum of H2O···imid, assigned as 0- and 0+ states, confirm that large amplitude motions occur on the time scale of the molecular rotation. Density functional theory has been performed to characterize these large amplitude motions.

9.
J Chem Phys ; 151(14): 144301, 2019 Oct 14.
Article in English | MEDLINE | ID: mdl-31615258

ABSTRACT

The rotational spectra of N-, 2-, 4-, and 5-methylimidazole are reported and analyzed. Liquid N-methylimidazole was vaporized from a reservoir, and each of 2-, 4-, and 5-methylimidazole was laser-vaporized from a solid target prior to mixing with argon buffer gas and undergoing supersonic expansion from a pulsed nozzle. The spectra were recorded by chirped-pulse Fourier transform microwave spectroscopy in the 7.0-18.5 GHz frequency range. Rotational constants, A0, B0, and C0, centrifugal distortion constants, DJ, DJK, DK, d1, and d2, and nuclear quadrupole coupling constants of nitrogen atoms, χaa(N1), χbb(N1) - χcc(N1), χaa(N3), and χbb(N3) - χcc(N3), are determined from experimentally measured transition frequencies. Data recorded for isotopologues containing 13C or 15N are used to determine the rs coordinates of all heavy atoms in N-, 2-, and 4-methylimidazole. The results allow fitting of parameters in the Hamiltonian that describes internal rotation of the CH3 group about its local C3 axis. The V3 terms in the periodic potential energy functions that describe the internal rotation in N-, 2-, 4-, and 5-methylimidazole are determined to be 185.104(11), 122.7529(38), 317.20(14), and 386.001(19) cm-1, respectively, by the internal axis method. The experiments are supported by density functional theory calculations. Observed variations in barrier height are explained with reference to the symmetry of overlap between a π-like orbital on the CH3 group and π-orbitals on the aromatic ring.

10.
Phys Chem Chem Phys ; 21(18): 9495-9503, 2019 May 08.
Article in English | MEDLINE | ID: mdl-31016310

ABSTRACT

Rotational spectra have been measured and assigned for four conformers of trans-urocanic acid. The acid was transferred into the gas phase through laser vaporisation of a solid sample, mixed with a neon buffer gas and then cooled through supersonic expansion. Molecules and complexes in the expanding gas jet were probed through chirped-pulse, Fourier transform microwave spectroscopy between 2.0 and 18.5 GHz. Rotational constants, A0, B0 and C0; centrifugal distortion constants, ΔJ and ΔJK; and nuclear quadrupole coupling constants of the nitrogen atoms, χaa(N) and χbb(N)-χcc(N), were determined for the various conformers. Data were obtained for ten isotopologues of the conformer that was observed to yield the spectrum of highest intensity. Substitution (rs) coordinates were determined for all carbon atoms and two hydrogen atoms of this conformer. Other observed spectra were assigned to conformers on the basis of excellent agreement between calculated and experimentally-determined rotational constants, and empirical observations of the relative intensities of a- and b-type transitions. The results of DFT calculations imply high barriers to the interconversion of assigned conformers.

11.
J Chem Phys ; 150(8): 084307, 2019 Feb 28.
Article in English | MEDLINE | ID: mdl-30823758

ABSTRACT

Ground-state rotational spectra were observed for ten symmetric-top isotopologues H3N⋯S=C=S, H3N⋯34S=C=S, H3N⋯S=C=34S, H3N⋯S=13C=S, H3 15N⋯S=C=S, H3 15N⋯34S=C=S, H3 15N⋯S=C=34S, H3 15N⋯S=13C=S, H3 15N⋯33S=C=S, and H3 15N⋯S=C=33S, the first five in their natural abundance in a mixture of ammonia and carbon disulphide in argon and the second group with enriched 15NH3. The four asymmetric-rotor isotopomers H2DN⋯S=C=S, H2DN⋯34S=C=S, H2DN⋯S=C=34S, and HD2N⋯S=C=S were investigated by using a sample composed of ND3 mixed with CS2. Rotational constants, centrifugal distortion constants, and 33S nuclear quadrupole coupling constants were determined from spectral analyses and were interpreted with the aid of models of the complex to determine its symmetry, geometry, one measure of the strength of the intermolecular binding, and information about the subunit dynamics. The complex has C3v symmetry, with nuclei in the order H3N⋯S=C=S, thereby establishing that the non-covalent interaction is a chalcogen bond involving the non-bonding electron pair of ammonia as the nucleophile and the axial region near one of the S atoms as the electrophile. The small intermolecular stretching force constant kσ = 3.95(5) N m-1 indicates a weak interaction and suggests the assumption of unperturbed component geometries on complex formation. A simple model used to account for the contribution of the subunit angular oscillations to the zero-point motion leads to the intermolecular bond length r(N⋯S) = 3.338(10) Å.

12.
Angew Chem Int Ed Engl ; 57(46): 15199-15203, 2018 Nov 12.
Article in English | MEDLINE | ID: mdl-30265433

ABSTRACT

Ice and solid H2 S look as different as pears and oranges, leading Pauling to conclude that H2 O has hydrogen bonds and H2 S has van der Waals interactions. Now it is shown that the H2 S dimer, like the H2 O dimer, is indeed hydrogen-bonded.

13.
Phys Chem Chem Phys ; 20(29): 19332-19338, 2018 Jul 25.
Article in English | MEDLINE | ID: mdl-29993059

ABSTRACT

Many complexes of the type BMX, (where B is a Lewis base such as H2, N2, ethyne, ethene, cyclopropane, H2O, H2S, PH3, or NH3, M is a coinage-metal atom Cu, Ag or Au, and X is a halogen atom) have now been characterised in the gas phase through their rotational spectra. It is pointed out that, for a given B, such complexes have angular geometries that are isomorphous with those of their hydrogen- and halogen-bonded counterparts BHX and BXY, respectively. Since the MX are, like the B, HX and XY referred to, closed-shell molecules, the complexes BMX also involve a non-covalent bond. Therefore, the name 'coinage-metal' bond is suggested for the non-covalent interaction in BMX, by analogy with hydrogen and halogen bonds. A generalised definition that covers all non-covalent bonds is also presented.

14.
J Chem Phys ; 147(21): 214303, 2017 Dec 07.
Article in English | MEDLINE | ID: mdl-29221380

ABSTRACT

The combination of halogen- and hydrogen-bonding capabilities possessed by 4-bromopyrazole and 4-iodopyrazole has led to them being described as "magic bullets" for biochemical structure determination. Laser vaporisation was used to introduce each of these 4-halopyrazoles into an argon gas sample undergoing supersonic expansion prior to the recording of the rotational spectra of these molecules by chirped-pulse Fourier transform microwave spectroscopy. Data were obtained for four isotopologues of 4-bromopyrazole and two isotopologues of 4-iodopyrazole. Isotopic substitutions were achieved at the hydrogens attached to the pyrrolic nitrogen atoms of both 4-halopyrazoles and at the bromine atom of 4-bromopyrazole. The experimentally determined nuclear quadrupole coupling constants, χaa(X) and χbb(X)-χcc(X), of the halogen atoms (where X is the halogen atom) of each molecule are compared with the results of the ab initio calculations and those for a range of other halogen-containing molecules. It is concluded that each of 4-bromopyrazole and 4-iodopyrazole will form halogen bonds that are broadly comparable in strength to those formed by CH3X and CF3X.

15.
J Chem Phys ; 147(23): 234308, 2017 Dec 21.
Article in English | MEDLINE | ID: mdl-29272951

ABSTRACT

The rotational spectra of H3N⋯AgI and H2O⋯AgI have been recorded between 6.5 and 18.5 GHz by chirped-pulse Fourier-transform microwave spectroscopy. The complexes were generated through laser vaporisation of a solid target of silver or silver iodide in the presence of an argon gas pulse containing a low concentration of the Lewis base. The gaseous sample subsequently undergoes supersonic expansion which results in cooling of rotational and vibrational motions such that weakly bound complexes can form within the expanding gas jet. Spectroscopic parameters have been determined for eight isotopologues of H3N⋯AgI and six isotopologues of H2O⋯AgI. Rotational constants, B0; centrifugal distortion constants, DJ, DJK or ΔJ, ΔJK; and the nuclear quadrupole coupling constants, χaa(I) and χbb(I) - χcc(I) are reported. H3N⋯AgI is shown to adopt a geometry that has C3v symmetry. The geometry of H2O⋯AgI is Cs at equilibrium but with a low barrier to inversion such that the vibrational wavefunction for the v = 0 state has C2v symmetry. Trends in the nuclear quadrupole coupling constant of the iodine nucleus, χaa(I), of L⋯AgI complexes are examined, where L is varied across the series (L = Ar, H3N, H2O, H2S, H3P, or CO). The results of experiments are reported alongside those of ab initio calculations at the CCSD(T)(F12*)/AVXZ level (X = T, Q).

16.
Phys Chem Chem Phys ; 19(36): 25080-25085, 2017 Sep 20.
Article in English | MEDLINE | ID: mdl-28880033

ABSTRACT

The shapes of macromolecules and their complexes with small molecules are often determined by extended networks of hydrogen bonds. Here, for the first time, we provide a detailed description of a cooperative pair of hydrogen bonds to an individual molecule of urea. The structure and properties of a gas phase complex formed between urea and isocyanic acid are characterised through microwave spectroscopy and ab initio calculations at the CCSD(T)(F12*)/aug-cc-pVTZ level.

17.
Front Physiol ; 8: 628, 2017.
Article in English | MEDLINE | ID: mdl-28890701

ABSTRACT

Introduction: Indirect results in humans suggest that chronic overfeeding decreases physical activity with few suggestions regarding what mechanism(s) may link overfeeding and decreased activity. The primary sex hormones are known regulators of activity and there are reports that chronic overfeeding alters sex hormone levels. Thepurpose of this study was to determine if chronic overfeeding altered wheel running through altered sex hormone levels. Materials and Methods: C57BL/6J mice were bred and the pups were weaned at 3-weeks of age and randomly assigned to either a control (CFD) or high fat/high sugar (HFHS) diet for 9-11 weeks depending on activity analysis. Nutritional intake, body composition, sex hormone levels, and 3-day and 2-week wheel-running activity were measured. Additionally, groups of HFHS animals were supplemented with testosterone (males) and 17ß-estradiol (females) to determine if sex hormone augmentation altered diet-induced changes in activity. Results: 117 mice (56♂, 61♀) were analyzed. The HFHS mice consumed significantly more calories per day than CFD mice (male: p < 0.0001; female: p < 0.0001) and had significantly higher body fat (male: p < 0.0001; female: p < 0.0001). The HFHS diet did not reduce sex hormone levels, but did significantly reduce acute running-wheel distance in male (p = 0.05, 70 ± 28%) and female mice (p = 0.02, 57 ± 26%). In animals that received hormone supplementation, there was no significant effect on activity levels. Two-weeks of wheel access was not sufficient to alter HFHS-induced reductions in activity or increases in body fat. Conclusion: Chronic overfeeding reduces wheel running, but is independent of the primary sex hormones.

18.
J Chem Phys ; 145(19): 194306, 2016 Nov 21.
Article in English | MEDLINE | ID: mdl-27875874

ABSTRACT

Complexes formed between H2S and each of CuI, AgI, and AuI have been isolated and structurally characterised in the gas phase. The H2S⋯MI complexes (where M is the metal atom) are generated through laser vaporisation of a metal rod in the presence of a low concentration of H2S and CF3I in a buffer gas of argon undergoing supersonic expansion. The microwave spectra of six isotopologues of each of H2S⋯CuI, H2S⋯AgI and three isotopologues of H2S⋯AuI have been measured by chirped-pulse Fourier transform microwave spectroscopy. The spectra are interpreted to determine geometries for the complexes and to establish the values of structural parameters. The complexes have Cs symmetry at equilibrium and have a pyramidal configuration about the sulfur atom. The local C2 axis of the hydrogen sulfide molecule intersects the linear axis defined by the three heavy atoms at an angle, ϕ = 75.00(47)° for M = Cu, ϕ = 78.43(76)° for M = Ag, and ϕ = 71.587(13)° for M = Au. The trend in the molecular geometries is consistent with significant relativistic effects in the gold-containing complex. The force constant describing the interaction between the H2S and MI sub-units is determined from the measured centrifugal distortion constant, ΔJ, of each complex. Nuclear quadrupole coupling constants, χaa(M) and χaa(I) (where M denotes the metal atom), are determined for H2S⋯CuI and H2S⋯AuI for the first time.

19.
Angew Chem Weinheim Bergstr Ger ; 128(11): 3832-3835, 2016 03 07.
Article in English | MEDLINE | ID: mdl-27478275

ABSTRACT

Carbenes of platinum and palladium, PtC3 and PdC3, were generated in the gas phase through laser vaporization of a metal target in the presence of a low concentration of a hydrocarbon precursor undergoing supersonic expansion. Rotational spectroscopy and ab initio calculations confirm that both molecules are linear. The geometry of PtC3 was accurately determined by fitting to the experimental moments of inertia of twenty-six isotopologues. The results are consistent with the proposal of an autogenic isolobal relationship between O, Au+, and Pt atoms.

20.
Phys Chem Chem Phys ; 18(28): 18971-7, 2016 Jul 28.
Article in English | MEDLINE | ID: mdl-27354204

ABSTRACT

The new compound H3PAgI has been synthesized in the gas phase by means of the reaction of laser-ablated silver metal with a pulse of gas consisting of a dilute mixture of ICF3 and PH3 in argon. Ground-state rotational spectra were detected and assigned for the two isotopologues H3P(107)AgI and H3P(109)AgI in their natural abundance by means of a chirped-pulse, Fourier-transform, microwave spectrometer. Both isotopologues exhibit rotational spectra of the symmetric-top type, analysis of which led to accurate values of the rotational constant B0, the quartic centrifugal distortion constants DJ and DJK, and the iodine nuclear quadrupole coupling constant χaa(I) = eQqaa. Ab initio calculations at the explicitly-correlated level of theory CCSD(T)(F12*)/aug-cc-pVDZ confirmed that the atoms PAg-I lie on the C3 axis in that order. The experimental rotational constants were interpreted to give the bond lengths r0(PAg) = 2.3488(20) Å and r0(Ag-I) = 2.5483(1) Å, in good agreement with the equilibrium lengths of 2.3387 Å and 2.5537 Å, respectively, obtained in the ab initio calculations. Measures of the strength of the interaction of PH3 and AgI (the dissociation energy De for the process H3PAgI = H3P + AgI and the intermolecular stretching force constant FPAg) are presented and are interpreted to show that the order of binding strength is H3PHI < H3PICl < H3PAgI for these metal-bonded molecules and their halogen-bonded and hydrogen-bonded analogues.

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