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1.
Mar Biotechnol (NY) ; 22(2): 285-307, 2020 Apr.
Article in English | MEDLINE | ID: mdl-32016679

ABSTRACT

Regeneration of a limb or tissue can be achieved through multiple different pathways and mechanisms. The sea anemone Exaiptasia pallida has been observed to have excellent regenerative proficiency, but this has not yet been described transcriptionally. In this study, we examined the genetic expression changes during a regenerative timecourse and reported key genes involved in regeneration and wound healing. We found that the major response was an early (within the first 8 h) upregulation of genes involved in cellular movement and cell communication, which likely contribute to a high level of tissue plasticity resulting in the rapid regeneration response observed in this species. We find the immune system was only transcriptionally active in the first 8 h post-amputation and conclude, in accordance with previous literature, that the immune system and regeneration have an inverse relationship. Fifty-nine genes (3.8% of total) differentially expressed during regeneration were identified as having no orthologues in other species, indicating that regeneration in E. pallida may rely on the activation of species-specific novel genes. Additionally, taxonomically restricted novel genes, including species-specific novels, and highly conserved genes were identified throughout the regenerative timecourse, showing that both may work in concert to achieve complete regeneration.


Subject(s)
Regeneration/genetics , Sea Anemones/genetics , Animals , Cell Communication/genetics , Cell Movement/genetics , Gene Expression Profiling , Regeneration/physiology , Sea Anemones/immunology , Sea Anemones/metabolism , Wound Healing/genetics
2.
J Bacteriol ; 191(6): 1827-37, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19124577

ABSTRACT

Lactobacillus reuteri BR11 possesses a novel mechanism of oxidative defense involving an abundant cystine ABC transporter encoded by the cyuABC gene cluster. Large amounts of thiols, including H(2)S, are secreted upon cystine uptake by the CyuC transporter. A cystathionine gamma-lyase (cgl) gene is cotranscribed with the cyu genes in several L. reuteri strains and was hypothesized to participate in cystine-mediated oxidative defense by producing reducing equivalents. This hypothesis was tested with L. reuteri BR11 by constructing a cgl mutant (PNG901) and comparing it to a similarly constructed cyuC mutant (PNG902). Although Cgl was required for H(2)S production from cystine, it was not crucial for oxidative defense in de Mann-Rogosa-Sharpe medium, in contrast to CyuC, whose inactivation resulted in lag-phase arrest in aerated cultures. The importance of Cgl in oxidative defense was seen only in the presence of hemin, which poses severe oxidative stress. The growth defects in aerated cultures of both mutants were alleviated by supplementation with cysteine (and cystine in the cgl mutant) but not methionine, with the cyuC mutant showing a much higher concentration requirement. We conclude that L. reuteri BR11 requires a high concentration of exogenous cysteine/cystine to grow optimally under aerobic conditions. This requirement is fulfilled by the abundant CyuC transporter, which has probably arisen due to the broad substrate specificity of Cgl, resulting in a futile pathway which degrades cystine taken up by the CyuC transporter to H(2)S. Cgl plays a secondary role in oxidative defense by its well-documented function of cysteine biosynthesis.


Subject(s)
Bacterial Proteins/metabolism , Cystathionine gamma-Lyase/metabolism , Cystine/metabolism , Limosilactobacillus reuteri/enzymology , Oxidative Stress , Bacterial Proteins/genetics , Cystathionine gamma-Lyase/genetics , Cysteine/metabolism , Limosilactobacillus reuteri/genetics , Membrane Transport Proteins/genetics , Membrane Transport Proteins/metabolism , Molecular Sequence Data , Oxidation-Reduction
3.
FEBS Lett ; 581(18): 3382-6, 2007 Jul 24.
Article in English | MEDLINE | ID: mdl-17604025

ABSTRACT

Characterization of the protease, HtrA, from pathogen Chlamydia trachomatis is presented. The purified recombinant protein was a serine endoprotease, specific for unfolded proteins, and temperature activated above 34 degrees C. Chaperone activity was observed, although this appeared target-dependent. Inactive protease (S247A) was able to chaperone insulin B-chain, irrespective of temperature, but at 30 degrees C only HtrA and not S247A displayed significant chaperone activity for alpha-lactalbumin. These data demonstrate that chaperone activity may involve functional protease domain and that C. trachomatis HtrA functions as both a chaperone and protease at 37 degrees C. These properties are consistent with the developmental cycle of this obligate intracellular bacterium.


Subject(s)
Chlamydia trachomatis/enzymology , Heat-Shock Proteins/metabolism , Serine Endopeptidases/metabolism , Temperature , Amino Acid Sequence , Caseins/metabolism , Chlamydia trachomatis/genetics , Chlamydia trachomatis/pathogenicity , Circular Dichroism , Enzyme Activation , Heat-Shock Proteins/chemistry , Heat-Shock Proteins/genetics , Insulin/metabolism , Lactalbumin/metabolism , Protein Binding , Protein Folding , Protein Structure, Secondary , Serine/genetics , Serine/metabolism , Serine Endopeptidases/chemistry , Serine Endopeptidases/genetics , Substrate Specificity
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