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1.
Am J Hum Genet ; 69(4): 780-90, 2001 Oct.
Article in English | MEDLINE | ID: mdl-11524701

ABSTRACT

A comprehensive analysis of somatic and germline mutations related to DNA mismatch-repair (MMR) genes can clarify the prevalence and mechanism of inactivation in colorectal carcinoma (CRC). In the present study, 257 unselected patients referred for CRC resection were examined for evidence of defective DNA MMR. In particular, we sought to determine the frequency of hereditary defects in DNA MMR in this cohort of patients. MMR status was assessed by testing of tumors for the presence or absence of hMLH1, hMSH2, and hMSH6 protein expression and for microsatellite instability (MSI). Of the 257 patients, 51 (20%) had evidence of defective MMR, demonstrating high levels of MSI (MSI-H) and an absence of either hMLH1 (n=48) or hMSH2 (n=3). All three patients lacking hMSH2, as well as one patient lacking hMLH1, also demonstrated an absence of hMSH6. DNA sequence analysis of the 51 patients with defective MMR revealed seven germline mutations-four in hMLH1 (two truncating and two missense) and three in hMSH2 (all truncating). A detailed family history was available for 225 of the 257 patients. Of the seven patients with germline mutations, only three had family histories consistent with hereditary nonpolyposis colorectal cancer. Of the remaining patients who had tumors with defective MMR, eight had somatic mutations in hMLH1. In addition, hypermethylation of the hMLH1 gene promoter was present in 37 (88%) of the 42 hMLH1-negative cases available for study and in all MSI-H tumors that showed loss of hMLH1 expression but no detectable hMLH1 mutations. Our results suggest that, although defective DNA MMR occurs in approximately 20% of unselected patients presenting for CRC resection, hereditary CRC due to mutations in the MMR pathway account for only a small proportion of patients. Of the 257 patients, only 5 (1.9%) appear to have unequivocal evidence of hereditary defects in MMR. The epigenetic (nonhereditary) mechanism of hMLH1 promoter hypermethylation appears to be responsible for the majority of the remaining patients whose tumors are characterized by defective DNA MMR.


Subject(s)
Base Pair Mismatch/genetics , Colorectal Neoplasms, Hereditary Nonpolyposis/genetics , DNA Repair/genetics , Genetic Predisposition to Disease/genetics , Germ-Line Mutation/genetics , Mutation/genetics , Adaptor Proteins, Signal Transducing , Adult , Age of Onset , Aged , Aged, 80 and over , Carrier Proteins , Colorectal Neoplasms, Hereditary Nonpolyposis/epidemiology , Colorectal Neoplasms, Hereditary Nonpolyposis/pathology , DNA Methylation , DNA Mutational Analysis , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Exons/genetics , Female , Humans , Introns/genetics , Male , Middle Aged , MutL Protein Homolog 1 , MutS Homolog 2 Protein , Neoplasm Proteins/genetics , Neoplasm Proteins/metabolism , Nuclear Proteins , Promoter Regions, Genetic/genetics , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins/metabolism
2.
Breast Cancer Res Treat ; 58(1): 25-9, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10634515

ABSTRACT

Recently, a novel tumor suppressor gene, p73, was isolated and mapped to chromosome 1p36, a region commonly associated with loss of heterozygosity in neuroblastoma and other human malignancies, including breast cancer. The p73 gene shares considerable homology with the common tumor suppressor gene p53, both in composition and function. This study examines the potential participation of p73 in the pathogenesis of sporadic and hereditary breast cancers. Mutation analysis of 29 hereditary breast cancer cases revealed five independent silent mutations in the hereditary cases that are unlikely to play a role in tumor development. Mutation analysis of 48 sporadic breast tumors did not identify any unique variants. Eleven common polymorphisms scattered throughout the gene were also detected. Thus, mutations in the p73 gene appear to play little if any role in hereditary or sporadic breast cancer.


Subject(s)
Breast Neoplasms/genetics , Breast Neoplasms/pathology , Carcinoma, Ductal, Breast/genetics , Carcinoma, Ductal, Breast/pathology , DNA-Binding Proteins/genetics , Genes, Tumor Suppressor/genetics , Nuclear Proteins/genetics , Female , Genetic Testing , Humans , Mutation , Polymerase Chain Reaction , Sequence Analysis, DNA , Tumor Protein p73 , Tumor Suppressor Proteins
3.
Am J Med Genet ; 63(3): 461-7, 1996 Jun 14.
Article in English | MEDLINE | ID: mdl-8737653

ABSTRACT

Hereditary progressive arthro-ophthalmopathy, or "Stickler syndrome," is an autosomal dominant osteochondrodysplasia characterized by a variety of ocular and skeletal anomalies which frequently lead to retinal detachment and precocious osteoarthritis. A variety of mutations in the COL2A1 gene have been identified in "Stickler" families; in most cases studied thus far, the consequence of mutation is the premature generation of a stop codon. We report here the characterization of a COL2A1 gene mutation in the original kindred described by Stickler et al. [1965]. Conformational sensitive gel electrophoresis (CSGE) [Ganguly et al., 1993] was used to screen for mutations in the entire COL2A1 gene in an affected member from the kindred. A prominent heteroduplex species was noted in the polymerase chain reaction (PCR) product from a region of the gene including exons 17 to 20. Direct sequencing of PCR-amplified genomic DNA resulted in the identification of a base substitution at the A-2 position of the 3' splice acceptor site of IVS17. Sequencing of DNA from affected and unaffected family members confirmed that the mutation segregated with the disease phenotype. Reverse transcriptase-PCR analysis of poly A+ RNA demonstrated that the mutant allele utilized a cryptic splice site in exon 18 of the gene, eliminating 16 bp at the start of exon 18. This frameshift eventually results in a premature termination codon. These findings are the first report of a splice site mutation in classical Stickler syndrome and they provide a satisfying historical context in which to view COL2A1 mutations in this dysplasia.


Subject(s)
Collagen/genetics , Eye Diseases/genetics , Joint Diseases/genetics , Mutation , RNA Splicing , Retinal Detachment/genetics , Adolescent , Aged , Base Sequence , Child, Preschool , Codon, Terminator , Electrophoresis, Polyacrylamide Gel/methods , Female , Humans , Infant, Newborn , Male , Middle Aged , Molecular Sequence Data , Myopia/genetics , Pedigree , Polymerase Chain Reaction/methods , RNA, Messenger/genetics , Syndrome
4.
Yale J Biol Med ; 64(3): 255-7, 1991.
Article in English | MEDLINE | ID: mdl-1788992
5.
Yale J Biol Med ; 64(1): 3-7, 1991.
Article in English | MEDLINE | ID: mdl-1897259

ABSTRACT

Screening newborn infants for inherited disorders has been effective in preventing mental retardation, growth failure, and death from several metabolic disorders for more than two decades. Technical advances have provided more screening tools for both genetic and nongenetic conditions, and in the coming decades these techniques will be used not only to screen newborns but to assess genetic risks in entire populations. The financial, legal, and ethical issues which these activities raise must influence the development of public policies in order to reap the benefits promised. The conference published here was designed to address these issues for health care practitioners, health policy planners, and public health professionals.


Subject(s)
Genetic Testing , Prenatal Diagnosis , Female , Genetic Carrier Screening , Genetic Diseases, Inborn/diagnosis , Humans , Infant, Newborn , Pregnancy
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