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1.
Leukemia ; 38(7): 1541-1552, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38750139

ABSTRACT

The clinical implications of CSF-ctDNA positivity in newly diagnosed diffuse large B cell lymphoma (ND-DLBCL) remains largely unexplored. One hundred ND-DLBCL patients were consecutively enrolled as training cohort and another 26 ND-DLBCL patients were prospectively enrolled in validation cohort. CSF-ctDNA positivity (CSF(+)) was identified in 25 patients (25.0%) in the training cohort and 7 patients (26.9%) in the validation cohort, extremely higher than CNS involvement rate detected by conventional methods. Patients with mutations of CARD11, JAK2, ID3, and PLCG2 were more predominant with CSF(+) while FAT4 mutations were negatively correlated with CSF(+). The downregulation of PI3K-AKT signaling, focal adhesion, actin cytoskeleton, and tight junction pathways were enriched in CSF(+) ND-DLBCL. Furthermore, pretreatment CSF(+) was significantly associated with poor outcomes. Three risk factors, including high CSF protein level, high plasma ctDNA burden, and involvement of high-risk sites were used to predict the risk of CSF(+) in ND-DLBCL. The sensitivity and specificity of pretreatment CSF-ctDNA to predict CNS relapse were 100% and 77.3%. Taken together, we firstly present the prevalence and the genomic and transcriptomic landscape for CSF-ctDNA(+) DLBCL and highlight the importance of CSF-ctDNA as a noninvasive biomarker in detecting and monitoring of CSF infiltration and predicting CNS relapse in DLBCL.


Subject(s)
Biomarkers, Tumor , Circulating Tumor DNA , Lymphoma, Large B-Cell, Diffuse , Mutation , Humans , Lymphoma, Large B-Cell, Diffuse/cerebrospinal fluid , Lymphoma, Large B-Cell, Diffuse/genetics , Lymphoma, Large B-Cell, Diffuse/diagnosis , Female , Male , Middle Aged , Biomarkers, Tumor/cerebrospinal fluid , Biomarkers, Tumor/genetics , Aged , Adult , Circulating Tumor DNA/cerebrospinal fluid , Circulating Tumor DNA/genetics , Circulating Tumor DNA/blood , Prognosis , Aged, 80 and over , Young Adult , Prospective Studies
2.
Adv Mater ; 25(28): 3780-801, 2013 Jul 26.
Article in English | MEDLINE | ID: mdl-23722464

ABSTRACT

This review is intended to reflect the recent progress on therapeutic applications of nanomaterials in amyloid diseases. The progress on anti-amyloid functions of various nanomaterials including inorganic nanoparticles, polymeric nanoparticles, carbon nanomaterials and biomolecular aggregates, is reviewed and discussed. The main functionalization strategies for general nanoparticle modifications are reviewed for potential applications of targeted therapeutics. The interaction mechanisms between amyloid peptides and nanomaterials are discussed from the perspectives of dominant interactions and kinetics. The encapsulation of anti-amyloid drugs, targeted drug delivery, controlled drug release and drug delivery crossing blood brain barrier by application of nanomaterials would also improve the therapeutics of amyloid diseases.


Subject(s)
Amyloid/drug effects , Amyloidosis/drug therapy , Amyloidosis/pathology , Nanostructures/therapeutic use , Amyloid/chemistry , Amyloid/metabolism , Animals , Drug Carriers/therapeutic use , Humans , Molecular Targeted Therapy , Nanostructures/chemistry
3.
Proc Natl Acad Sci U S A ; 108(49): 19605-10, 2011 Dec 06.
Article in English | MEDLINE | ID: mdl-22106265

ABSTRACT

We report here the identification of the key sites for the beta structure motifs of the islet amyloid polypeptide (IAPP) analogs by using scanning tunneling microscopy (STM). Duplex folding structures in human IAPP(8-37) (hIAPP(8-37)) assembly were observed featuring a hairpin structure. The multiplicity in rIAPP assembly structures indicates the polydispersity of the rat IAPP(8-37) (rIAPP(8-37)) beta-like motifs. The bimodal length distribution of beta structure motifs for rIAPP(8-37) R18H indicates the multiple beta segments linked by turns. The IAPP(8-37) analogs share common structure motifs of IAPP(8-17) and IAPP(26-37) with the most probable key sites at positions around Ser(19)/Ser(20) and Gly(24). These observations reveal the similar amyloid formation tendency in the C and N terminus segments because of the sequence similarity, while the differences in specific amino acids at each key site manifest the effect of sequence variations. The results could be beneficial for studying structural polymorphism of amyloidal peptides with multiple beta structure motifs.


Subject(s)
Amino Acid Motifs , Islet Amyloid Polypeptide/chemistry , Peptide Fragments/chemistry , Protein Structure, Secondary , Amino Acid Sequence , Animals , Binding Sites/genetics , Humans , Islet Amyloid Polypeptide/genetics , Islet Amyloid Polypeptide/metabolism , Microscopy, Scanning Tunneling , Models, Molecular , Molecular Sequence Data , Mutation , Peptide Fragments/genetics , Peptide Fragments/metabolism , Protein Folding , Protein Structure, Tertiary , Rats
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