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1.
Sensors (Basel) ; 21(8)2021 Apr 12.
Article in English | MEDLINE | ID: mdl-33921451

ABSTRACT

The accuracy in diagnosing prostate cancer (PCa) has increased with the development of multiparametric magnetic resonance imaging (mpMRI). Biparametric magnetic resonance imaging (bpMRI) was found to have a diagnostic accuracy comparable to mpMRI in detecting PCa. However, prostate MRI assessment relies on human experts and specialized training with considerable inter-reader variability. Deep learning may be a more robust approach for prostate MRI assessment. Here we present a method for autosegmenting the prostate zone and cancer region by using SegNet, a deep convolution neural network (DCNN) model. We used PROSTATEx dataset to train the model and combined different sequences into three channels of a single image. For each subject, all slices that contained the transition zone (TZ), peripheral zone (PZ), and PCa region were selected. The datasets were produced using different combinations of images, including T2-weighted (T2W) images, diffusion-weighted images (DWI) and apparent diffusion coefficient (ADC) images. Among these groups, the T2W + DWI + ADC images exhibited the best performance with a dice similarity coefficient of 90.45% for the TZ, 70.04% for the PZ, and 52.73% for the PCa region. Image sequence analysis with a DCNN model has the potential to assist PCa diagnosis.


Subject(s)
Deep Learning , Multiparametric Magnetic Resonance Imaging , Prostatic Neoplasms , Diffusion Magnetic Resonance Imaging , Humans , Magnetic Resonance Imaging , Male , Neural Networks, Computer , Prostate/diagnostic imaging , Prostatic Neoplasms/diagnostic imaging
2.
Sci Rep ; 11(1): 3463, 2021 02 10.
Article in English | MEDLINE | ID: mdl-33568725

ABSTRACT

Classifying mental disorder is a big issue in psychology in recent years. This article focuses on offering a relation between decision tree and encoding of fMRI that can simplify the analysis of different mental disorders and has a high ROC over 0.9. Here we encode fMRI information to the power-law distribution with integer elements by the graph theory in which the network is characterized by degrees that measure the number of effective links exceeding the threshold of Pearson correlation among voxels. When the degrees are ranked from low to high, the network equation can be fit by the power-law distribution. Here we use the mentally disordered SHR and WKY rats as samples and employ decision tree from chi2 algorithm to classify different states of mental disorder. This method not only provides the decision tree and encoding, but also enables the construction of a transformation matrix that is capable of connecting different metal disorders. Although the latter attempt is still in its fancy, it may have a contribution to unraveling the mystery of psychological processes.


Subject(s)
Algorithms , Brain/diagnostic imaging , Decision Trees , Mental Disorders/diagnosis , Anesthetics, Inhalation , Animals , Brain/physiology , Humans , Isoflurane , Magnetic Resonance Imaging , Rats , Rats, Inbred SHR , Rats, Inbred WKY
3.
ACS Appl Mater Interfaces ; 12(40): 44407-44419, 2020 Oct 07.
Article in English | MEDLINE | ID: mdl-32865389

ABSTRACT

Antiangiogenic therapy is widely administered in many cancers, and the antiangiogenic drug sorafenib offers moderate benefits in advanced hepatocellular carcinoma (HCC). However, antiangiogenic therapy can also lead to hypoxia-driven angiogenesis and immunosuppression in the tumor microenvironment (TME) and metastasis. Here, we report the synthesis and evaluation of NanoMnSor, a tumor-targeted, nanoparticle drug carrier that efficiently codelivers oxygen-generating MnO2 and sorafenib into HCC. We found that MnO2 not only alleviates hypoxia by catalyzing the decomposition of H2O2 to oxygen but also enhances pH/redox-responsive T1-weighted magnetic resonance imaging and drug-release properties upon decomposition into Mn2+ ions in the TME. Moreover, macrophages exposed to MnO2 displayed increased mRNA associated with the immunostimulatory M1 phenotype. We further show that NanoMnSor treatment leads to sorafenib-induced decrease in tumor vascularization and significantly suppresses primary tumor growth and distal metastasis, resulting in improved overall survival in a mouse orthotopic HCC model. Furthermore, NanoMnSor reprograms the immunosuppressive TME by reducing the hypoxia-induced tumor infiltration of tumor-associated macrophages, promoting macrophage polarization toward the immunostimulatory M1 phenotype, and increasing the number of CD8+ cytotoxic T cells in tumors, thereby augmenting the efficacy of anti-PD-1 antibody and whole-cell cancer vaccine immunotherapies. Our study demonstrates the potential of oxygen-generating nanoparticles to deliver antiangiogenic agents, efficiently modulate the hypoxic TME, and overcome hypoxia-driven drug resistance, thereby providing therapeutic benefit in cancer.


Subject(s)
Angiogenesis Inhibitors/pharmacology , Antineoplastic Agents/pharmacology , Carcinoma, Hepatocellular/drug therapy , Liver Neoplasms/drug therapy , Manganese Compounds/pharmacology , Nanoparticles/chemistry , Neovascularization, Pathologic/drug therapy , Oxides/pharmacology , Angiogenesis Inhibitors/chemistry , Animals , Antineoplastic Agents/chemistry , Carcinoma, Hepatocellular/pathology , Drug Carriers/chemistry , Drug Carriers/pharmacology , Humans , Liver Neoplasms/pathology , Male , Manganese Compounds/chemistry , Mice , Mice, Inbred C3H , Neovascularization, Pathologic/pathology , Oxides/chemistry , Particle Size , Surface Properties , Tumor Cells, Cultured , Tumor Escape/drug effects , Tumor Hypoxia/drug effects
4.
J Magn Reson Imaging ; 51(1): 311-318, 2020 01.
Article in English | MEDLINE | ID: mdl-31125166

ABSTRACT

BACKGROUND: Gadolinium-based contrast agents can be used to identify the blood-brain barrier (BBB) opening after inducing a focused ultrasound (FUS) cavitation effect in the presence of microbubbles. However, the use of gadolinium may be limited for frequent routine monitoring of the BBB opening in clinical applications. PURPOSE: To use a gradient-echo sequence without contrast agent administration for monitoring of acoustic cavitation. STUDY TYPE: Animal and phantom prospective. PHANTOM/ANIMAL MODEL: Static and flowing gel phantoms; six normal adult male Sprague-Dawley rats. FIELD STRENGTH/SEQUENCE: 3T, 7T; fast low-angle shot sequence. ASSESSMENT: Burst FUS with acoustic pressures = 1.5, 2.2, 2.8 MPa; pulse repetition frequencies = 1, 10,100 Hz; and duty cycles = 2%, 5%, 10% were transmitted to the chamber of a static phantom with microbubble concentrations = 10%, 1%, 0.1%. MR slice thicknesses = 3, 6, 8 mm were acquired. In flowing phantom experiments, 0.1%, 0.25%, 0.5%, 0.75%, and 1% microbubbles were infused and transmitted by burst FUS with an acoustic pressure = 0.4 and 1 MPa. In in vivo experiments, 0.25% microbubbles was infused and 0.8 MPa burst FUS was transmitted to targeted brain tissue beneath the superior sagittal sinus. The mean signal intensity (SI) was normalized using the mean SI from pre-FUS. STATISTICAL TESTS: Two-tailed Student's t-test. P < 0.05 was considered statistically significant. RESULTS: In the static phantom, the time courses of normalized SI decreases to minimum SI levels of 70-80%. In the flowing phantom, substantial normalized SI of 160-230% was present with variant acoustic pressures and microbubble concentrations. Compared with in vivo control rats, the brain tissue of experimental rats with transmission of FUS pulses exhibited considerable decreases of normalized SI (P < 0.001) because of the cavitation-induced perturbation of flow. DATA CONCLUSION: Observing gradient-echo SI changes can help monitor the targeted location of microbubble-enhanced FUS, which in turn assists the monitoring of the BBB opening. LEVEL OF EVIDENCE: 2 Technical Efficacy: Stage 1 J. Magn. Reson. Imaging 2020;51:311-318.


Subject(s)
Blood-Brain Barrier/diagnostic imaging , Contrast Media , Gadolinium , Magnetic Resonance Imaging/methods , Microbubbles , Sonication/methods , Acoustics , Animals , Male , Models, Animal , Phantoms, Imaging , Rats , Rats, Sprague-Dawley
5.
Nat Nanotechnol ; 14(12): 1160-1169, 2019 12.
Article in English | MEDLINE | ID: mdl-31740794

ABSTRACT

Abnormal tumour vasculature has a significant impact on tumour progression and response to therapy. Nitric oxide (NO) regulates angiogenesis and maintains vascular homeostasis and, thus, can be delivered to normalize tumour vasculature. However, a NO-delivery system with a prolonged half-life and a sustained release mechanism is currently lacking. Here we report the development of NanoNO, a nanoscale carrier that enables sustained NO release to efficiently deliver NO into hepatocellular carcinoma. Low-dose NanoNO normalizes tumour vessels and improves the delivery and effectiveness of chemotherapeutics and tumour necrosis factor-related, apoptosis-inducing, ligand-based therapy in both primary tumours and metastases. Furthermore, low-dose NanoNO reprogrammes the immunosuppressive tumour microenvironment toward an immunostimulatory phenotype, thereby improving the efficacy of cancer vaccine immunotherapy. Our findings demonstrate the ability of nanoscale NO delivery to efficiently reprogramme tumour vasculature and immune microenvironments to overcome resistance to cancer therapy, resulting in a therapeutic benefit.


Subject(s)
Carcinoma, Hepatocellular/drug therapy , Delayed-Action Preparations/chemistry , Liver Neoplasms/drug therapy , Nanoparticles/chemistry , Neovascularization, Pathologic/drug therapy , Nitric Oxide/administration & dosage , Adjuvants, Immunologic/administration & dosage , Adjuvants, Immunologic/therapeutic use , Animals , Carcinoma, Hepatocellular/blood supply , Humans , Liver Neoplasms/blood supply , Male , Mice , Nitric Oxide/therapeutic use , Tumor Microenvironment/drug effects
6.
PLoS One ; 14(2): e0212092, 2019.
Article in English | MEDLINE | ID: mdl-30753222

ABSTRACT

BACKGROUND: This study evaluated the performance of histogram analysis in the time course of dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) for differentiating cancerous tissues from benign tissues in the prostate. METHODS: We retrospectively analyzed the histograms of DCE-MRI of 30 patients. Histograms within regions of interest(ROI) in the peripheral zone (PZ) and transitional zone (TZ) were separately analyzed. The maximum difference wash-in slope (MWS) and delay phase slope (DPS) were defined for each voxel. Differences in histogram parameters, namely the mean, standard deviation (SD), the coefficient of variation (CV), kurtosis, skewness, interquartile range (IQR), percentile (P10, P25, P75, P90, and P90P10), Range, and modified full width at half-maximum (mFWHM) between cancerous and benign tissues were assessed. RESULTS: In the TZ, CV for ROIs of 7.5 and 10mm was the only significantly different parameter of the MWS (P = 0.034 and P = 0.004, respectively), whereas many parameters of the DPS (mean, skewness, P10, P25, P50, P75 and P90) differed significantly (P = <0.001-0.016 and area under the curve [AUC] = 0.73-0.822). In the PZ, all parameters of the MWS exhibited significant differences, except kurtosis and skewness in the ROI of 7.5mm(P = <0.001-0.017 and AUC = 0.865-0.898). SD, IQR, mFWHM, P90P10 and Range were also significant differences in the DPS (P = 0.001-0.035). CONCLUSION: The histogram analysis of DCE-MRI is a potentially useful approach for differentiating prostate cancer from normal tissues. Different histogram parameters of the MWS and DPS should be applied in the TZ and PZ.


Subject(s)
Contrast Media , Image Processing, Computer-Assisted , Magnetic Resonance Imaging , Prostatic Neoplasms/diagnostic imaging , Aged , Humans , Male , Middle Aged , Neoplasm Grading , Prostatic Neoplasms/pathology , ROC Curve , Retrospective Studies
7.
Int J Hyperthermia ; 33(7): 770-778, 2017 11.
Article in English | MEDLINE | ID: mdl-28540811

ABSTRACT

The gadolinium-doped iron oxide nanoparticles (GdIONP) with greater specific power adsorption rate (SAR) than Fe3O4 was developed and its potential application in tumour therapy and particle tracking were demonstrated in transgenic adenocarcinoma of the mouse prostate C1 (TRAMP-C1) tumours. The GdIONPs accumulated in tumour region during the treatment could be clearly tracked and quantified by T2-weighted MR imaging. The therapeutic effects of GdIONP-mediated hyperthermia alone or in combination with radiotherapy (RT) were also evaluated. A significant increase in the tumour growth time was observed following the treatment of thermotherapy (TT) only group (2.5 days), radiation therapy only group (4.5 days), and the combined radio-thermotherapy group (10 days). Immunohistochemical staining revealed a reduced hypoxia region with vascular disruption and extensive tumour necrosis following the combined radio-thermotherapy. These results indicate that GdIONP-mediated hyperthermia can improve the efficacy of RT by its dual functions in high temperature (temperature greater than 45 °C)-mediated thermal ablation and mild-temperature hyperthermia (MTH) (temperature between 39 and 42 °C)-mediated reoxygenation.


Subject(s)
Gadolinium/therapeutic use , Hyperthermia, Induced , Magnetic Fields , Magnetite Nanoparticles/therapeutic use , Prostatic Neoplasms/therapy , Animals , Cell Line, Tumor , Combined Modality Therapy , Hypoxia/pathology , Hypoxia/radiotherapy , Hypoxia/therapy , Male , Mice, Inbred C57BL , Prostatic Neoplasms/pathology , Prostatic Neoplasms/radiotherapy , Tumor Burden
8.
Nat Commun ; 7: 11095, 2016 Mar 31.
Article in English | MEDLINE | ID: mdl-27029856

ABSTRACT

Plant vacuoles serve as the primary intracellular compartments for inorganic phosphate (Pi) storage. Passage of Pi across vacuolar membranes plays a critical role in buffering the cytoplasmic Pi level against fluctuations of external Pi and metabolic activities. Here we demonstrate that the SPX-MFS proteins, designated as PHOSPHATE TRANSPORTER 5 family (PHT5), also named Vacuolar Phosphate Transporter (VPT), function as vacuolar Pi transporters. Based on (31)P-magnetic resonance spectroscopy analysis, Arabidopsis pht5;1 loss-of-function mutants accumulate less Pi and exhibit a lower vacuolar-to-cytoplasmic Pi ratio than controls. Conversely, overexpression of PHT5 leads to massive Pi sequestration into vacuoles and altered regulation of Pi starvation-responsive genes. Furthermore, we show that heterologous expression of the rice homologue OsSPX-MFS1 mediates Pi influx to yeast vacuoles. Our findings show that a group of Pi transporters in vacuolar membranes regulate cytoplasmic Pi homeostasis and are required for fitness and plant growth.


Subject(s)
Arabidopsis Proteins/physiology , Arabidopsis/metabolism , Phosphate Transport Proteins/physiology , Phosphates/metabolism , Vacuoles/metabolism , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Biological Transport/genetics , Homeostasis , Magnetic Resonance Spectroscopy , Oryza/genetics , Phosphate Transport Proteins/genetics , Phosphate Transport Proteins/metabolism
9.
Sci Rep ; 6: 21697, 2016 Feb 22.
Article in English | MEDLINE | ID: mdl-26898170

ABSTRACT

Genetic divergences among mammalian strains are presented phenotypically in various aspects of physical appearance such as body shape and facial features. Yet how genetic diversity is expressed in brain function still remains unclear. Functional connectivity has been shown to be a valuable approach in characterizing the relationship between brain functions and behaviors. Alterations in the brain default mode network (DMN) have been found in human neuropsychological disorders. In this study we selected the spontaneously hypertensive rat (SHR) and the Wistar Kyoto rat (WKY), two inbred rat strains with close genetic origins, to investigate variations in the DMN. Our results showed that the major DMN differences are the activities in hippocampal area and caudate putamen region. This may be correlated to the hyperactive behavior of the SHR strain. Advanced animal model studies on variations in the DMN may have potential to shed new light on translational medicine, especially with regard to neuropsychological disorders.


Subject(s)
Caudate Nucleus/physiology , Hippocampus/physiology , Hypertension/physiopathology , Nerve Net/physiology , Putamen/physiology , Animals , Caudate Nucleus/physiopathology , Hippocampus/physiopathology , Humans , Magnetic Resonance Imaging , Male , Nerve Net/physiopathology , Putamen/physiopathology , Rats , Rats, Inbred SHR , Rats, Inbred WKY , Rest/physiology , Species Specificity
10.
Magn Reson Imaging ; 34(5): 624-31, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26712655

ABSTRACT

PURPOSE: To measure wall shear stress (WSS) in the common carotid arteries (CCA) of a spontaneously hypertensive rat (SHR) model and a normotensive Wistar Kyoto rat (WKY) model by 2D phase-contrast magnetic resonance imaging (PC-MRI). MATERIALS AND METHODS: PC-MRI was performed on 7 SHR and 7 WKY at ages of 4 and 7months at a 7T scanner. Images in the middle CCA (CCAmid) and in the bifurcation of CCA (CCAbifur) were acquired. The WSS values for differentiating characteristics between two models were calculated. Further, its location-specific change, regional distribution along the CCA circumference, and the reproducibility were evaluated. RESULTS: In the 4-month-old rats, SHR showed lower temporal averaged WSS (WSSavg) and peak systolic WSS (WSSs) in the CCAbifur in comparison with WKY (WSSavg: 0.95±0.18 vs. 1.30±0.36N/m(2) (P<0.01); WSSs: 1.68±0.70 vs. 3.22±2.49N/m(2) (P<0.05)). We observed the same trends in the 7-month-old rats. In the SHR model, the WSSavg was lower in the CCAbifur than in the CCAmid. The regional distribution of WSSavg along the circumference of CCA showed lower values in WKY, particularly in posterior segments of CCAbifur. The intra-observer, intra-scan and inter-scan reproducibility was acceptable and the disagreements were ranged from -0.05 to 0.06N/m(2). CONCLUSION: This study evaluated WSS in SHR and WKY models by 2D PC-MRI. High reproducibility analyses further indicated the reliability of measurements of WSS in the CCA of SHR and WKY models using PC-MRI at 7T.


Subject(s)
Carotid Artery, Common/diagnostic imaging , Carotid Artery, Common/physiopathology , Hypertension/physiopathology , Magnetic Resonance Imaging/methods , Animals , Disease Models, Animal , Male , Rats , Rats, Inbred SHR , Rats, Wistar , Reproducibility of Results
11.
Sci Rep ; 5: 15062, 2015 Oct 12.
Article in English | MEDLINE | ID: mdl-26455576

ABSTRACT

Chemical exchange saturation transfer magnetic resonance imaging (CEST-MRI) is capable of both microenvironment and molecular imaging. The optimization of scanning parameters is important since the CEST effect is sensitive to factors such as saturation power and field homogeneity. The aim of this study was to determine if the CEST effect would be altered by changing the length of readout RF pulses. Both theoretical computer simulation and phantom experiments were performed to examine the influence of readout RF pulses. Our results showed that the length of readout RF pulses has unremarkable impact on the Z-spectrum and CEST effect in both computer simulation and phantom experiment. Moreover, we demonstrated that multiple refocusing RF pulses used in rapid acquisition with relaxation enhancement (RARE) sequence induced no obvious saturation transfer contrast. Therefore, readout RF pulse has negligible effect on CEST Z-spectrum and the optimization of readout RF pulse length can be disregarded in CEST imaging protocol.

12.
J Magn Reson Imaging ; 42(4): 1126-33, 2015 Oct.
Article in English | MEDLINE | ID: mdl-25676350

ABSTRACT

BACKGROUND: Whole-brain cerebral blood flow (CBF) measured by phase-contrast MRI (PC-MRI) provides an important index for brain function. This work aimed to optimize the PC-MRI imaging protocol for accurate CBF measurements. METHODS: Two studies were performed on a 3 Tesla system. In Study 1 (N = 12), we optimized in-plane resolution of PC-MRI acquisition for CBF quantification by considering accuracy, precision, and scan duration. In Study 2 (N = 7), we assessed the detrimental effect of nonperpendicular imaging slice orientation on CBF quantification. Both One-way analysis of variance with repeated measurement and Friedman test were used to examine the effects of resolution and angulation on CBF quantification. Additionally, we evaluated the inter-rater reliability in PC-MRI data processing. RESULTS: Our results showed that CBF measurement with 0.7 mm resolution could be overestimated by up to 13.3% when compared with 0.4 mm resolution. Moreover, CBF could also be overestimated by up to 18.8% when the slice orientation is deviated by 30° from the ideal angulation. However, within 10° of the ideal slice orientation, estimated CBF was not significantly different from each other (P = 0.23 and 0.45 for internal carotid artery and vertebral artery, respectively). Inter-rater difference was <3%. CONCLUSION: For fast and accurate quantification of whole-brain CBF with PC-MRI, we recommend the use of an imaging resolution of 0.5 mm and a slice orientation that is less than 10° from vessel's axial plane.


Subject(s)
Blood Flow Velocity/physiology , Brain/physiology , Cerebrovascular Circulation/physiology , Image Enhancement/methods , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Angiography/methods , Adult , Brain/anatomy & histology , Female , Humans , Male , Middle Aged , Reproducibility of Results , Sensitivity and Specificity
13.
NMR Biomed ; 26(11): 1540-6, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23794141

ABSTRACT

The susceptibility differences at the gas-liquid interface of microbubbles (MBs) allow their use as an intravascular susceptibility contrast agent for in vivo MRI. However, the characteristics of MBs are very different from those of the standard gadolinium-diethylenetriaminepentaacetic acid (Gd-DPTA) contrast agent, including the size distribution and hemodynamic properties, which could influence MRI outcomes. Here, we investigate quantitatively the correlation between the relative cerebral blood volume (rCBV) derived from Gd-DTPA (rCBV(Gd)) and the MB-induced susceptibility effect (ΔR(2*MB)) by conventional dynamic susceptibility contrast MRI (DSC-MRI). Custom-made MBs had a mean diameter of 0.92 µm and were capable of inducing 4.68 ± 3.02% of the maximum signal change (MSC). The MB-associated ΔR(2*MB) was compared with rCBV(Gd) in 16 rats on 4.7-T MRI. We observed a significant effect of the time to peak (TTP) on the correlation between ΔR(2*MB) and rCBV(Gd), and also found a noticeable dependence between TTP and MSC. Our findings suggest that MBs with longer TTPs can be used for the estimation of rCBV by DSC-MRI, and emphasize the critical effect of TTP on MB-based contrast MRI.


Subject(s)
Blood Volume Determination/methods , Blood Volume/physiology , Cerebrovascular Circulation/physiology , Contrast Media , Magnetic Resonance Imaging , Microbubbles , Animals , Gadolinium DTPA , Male , Rats , Rats, Sprague-Dawley , Signal Processing, Computer-Assisted , Time Factors
14.
J Agric Food Chem ; 61(21): 5009-15, 2013 May 29.
Article in English | MEDLINE | ID: mdl-23646931

ABSTRACT

In this study, the laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) was adopted to determine the distribution of inorganic elements, including Ca, Cu, Fe, Mg, Mn, S, P, Pb, and Zn, in honeybees (Apis melifera L.). Two features are particularly noteworthy. First, it was found there is a significant amount of Fe located at the fringe of the abdomen in worker bees; ultrasonic imaging, scanning electron microscopy, and magnetic resonance imaging revealed that it arose from magnetic Fe-bearing nanoparticles (NPs) having an average diameter of approximately 40 nm. Interestingly, only worker bees contained these magnetic Fe-bearing NPs; no similar features appeared in larvae, pupae, wasps, or drones. Second, a detectable amount of Pb accumulated particularly in the alimentary canals of worker bees. Again, no detectable amounts of Pb in larvae, pupae, drones, or wasps, yet a level of 0.24 ± 0.05 mg/kg of Pb in pollen; therefore, the diet appears to be the primary pathway for environmental pollutants entering the honeybees' food chain.


Subject(s)
Bees/chemistry , Bees/physiology , Environmental Pollutants/analysis , Feeding Behavior , Metals/analysis , Animals , Environmental Pollutants/metabolism , Laser Therapy , Mass Spectrometry , Metals/metabolism
15.
Quant Imaging Med Surg ; 3(2): 73-81, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23630654

ABSTRACT

OBJECTIVE: This study investigates the application of a modified reversed gradient algorithm to the Propeller-EPI imaging method (periodically rotated overlapping parallel lines with enhanced reconstruction based on echo-planar imaging readout) for corrections of geometric distortions due to the EPI readout. MATERIALS AND METHODS: Propeller-EPI acquisition was executed with 360-degree rotational coverage of the k-space, from which the image pairs with opposite phase-encoding gradient polarities were extracted for reversed gradient geometric and intensity corrections. The spatial displacements obtained on a pixel-by-pixel basis were fitted using a two-dimensional polynomial followed by low-pass filtering to assure correction reliability in low-signal regions. Single-shot EPI images were obtained on a phantom, whereas high spatial resolution T2-weighted and diffusion tensor Propeller-EPI data were acquired in vivo from healthy subjects at 3.0 Tesla, to demonstrate the effectiveness of the proposed algorithm. RESULTS: Phantom images show success of the smoothed displacement map concept in providing improvements of the geometric corrections at low-signal regions. Human brain images demonstrate prominently superior reconstruction quality of Propeller-EPI images with modified reversed gradient corrections as compared with those obtained without corrections, as evidenced from verification against the distortion-free fast spin-echo images at the same level. CONCLUSIONS: The modified reversed gradient method is an effective approach to obtain high-resolution Propeller-EPI images with substantially reduced artifacts.

16.
NMR Biomed ; 26(6): 692-8, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23355425

ABSTRACT

Deuterium oxide (D2 O), which is commercially available and nonradioactive, was proposed as a perfusion tracer before the clinical usage of conventional gadolinium-based MRI contrast agents. However, the sensitivity of direct deuterium detection is the major challenge for its application. In this study, we propose a contrast-enhanced strategy to indirectly trace administered D2 O by monitoring the signal attenuation of (1) H MRI. Experiments on D2 O concentration phantoms and in vivo rat brains were conducted to prove the concept of the proposed contrast mechanism. An average maximum signal drop ratio of 5.25 ± 0.91% was detected on (1) H MR images of rat brains with 2 mL of D2 O administered per 100 g of body weight. As a diffusible tracer for perfusion, D2 O infusion is a practicable method for the assessment of tissue perfusion and has the potential to provide different information from gadolinium-based contrast agents, which have limited permeability for blood vessels. Furthermore, the observed negative relaxivities of D2 O reveal the (1) H-D exchange effect. Therefore, applications of perfusion MRI with D2 O as a contrast agent are worthy of further investigation.


Subject(s)
Brain/blood supply , Contrast Media , Deuterium Oxide , Magnetic Resonance Imaging/methods , Animals , Phantoms, Imaging , Rats , Rats, Sprague-Dawley , Water
17.
Int J Cardiovasc Imaging ; 29(1): 131-40, 2013 Jan.
Article in English | MEDLINE | ID: mdl-22552864

ABSTRACT

To implement a flow-gating method to acquire phase-contrast (PC) images of carotid arteries without use of an electrocardiography (ECG) signal to synchronize the acquisition of imaging data with pulsatile arterial flow. The flow-gating method was realized through radial scanning and sophisticated post-processing methods including downsampling, complex difference, and correlation analysis to improve the evaluation of flow-gating times in radial phase-contrast scans. Quantitatively comparable results (R = 0.92-0.96, n = 9) of flow-related parameters, including mean velocity, mean flow rate, and flow volume, with conventional ECG-gated imaging demonstrated that the proposed method is highly feasible. The radial flow-gating PC imaging method is applicable in carotid arteries. The proposed flow-gating method can potentially avoid the setting up of ECG-related equipment for brain imaging. This technique has potential use in patients with arrhythmia or weak ECG signals.


Subject(s)
Cardiac-Gated Imaging Techniques/methods , Carotid Arteries/physiology , Magnetic Resonance Angiography , Pulsatile Flow , Adult , Algorithms , Blood Flow Velocity , Electrocardiography , Feasibility Studies , Female , Humans , Image Interpretation, Computer-Assisted , Male , Predictive Value of Tests , Regional Blood Flow , Young Adult
18.
NMR Biomed ; 26(4): 443-50, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23073840

ABSTRACT

Dynamic contrast-enhanced MRI (DCE MRI) has been used to study tumor response to treatment for many years. In this study, the modified full width at half-maximum (mFWHM), calculated from the wash-in slope histogram, is proposed as a parameter for the evaluation of changes in tumor heterogeneity which respond to radiotherapy. Twenty-five patients with brain tumors were evaluated and divided into the nonresponder group (n = 11) and the responder group (n = 14) according to the Response Evaluation Criteria in Solid Tumors (RECIST). All selected tumors were evaluated by mFWHM ratios of post- to pre-therapy (the ratio was defined as the therapeutic mFWHM ratio, TMR). The changes in kurtosis of the histograms and the averaged K(trans) within a tumor were also calculated for comparison. The receiver operating characteristic analysis and Kaplan-Meier curves were used to examine the diagnosis ability. The TMR values were significantly higher in nonresponders than in responders (p < 0.001). When compared with the other two parameters, the proposed method also demonstrated better sensitivity and specificity. When adopting the TMR for the estimation of prognosis after therapy, there was a significant difference between the population survival curves. In conclusion, the derived mFWHM reflects tumor heterogeneity, and the ability to depict patient survival probability from TMR corresponds well with that from RECIST. The results reveal that, in brain tumors, progression may be exhibited not only by tumor size, but also by tumor heterogeneity.


Subject(s)
Brain Neoplasms/diagnosis , Brain Neoplasms/radiotherapy , Contrast Media , Magnetic Resonance Imaging , Adolescent , Adult , Aged , Aged, 80 and over , Female , Humans , Kaplan-Meier Estimate , Male , Middle Aged , ROC Curve , Treatment Outcome
19.
J Neuroimaging ; 23(2): 202-6, 2013 Apr.
Article in English | MEDLINE | ID: mdl-21914033

ABSTRACT

BACKGROUND AND PURPOSE: The combination of phase demodulation and field mapping is a practical method to correct echo planar imaging (EPI) geometric distortion. However, since phase dispersion accumulates in each phase-encoding step, the calculation complexity of phase modulation is Ny-fold higher than conventional image reconstructions. Thus, correcting EPI images via phase demodulation is generally a time-consuming task. METHODS: Parallel computing by employing general-purpose calculations on graphics processing units (GPU) can accelerate scientific computing if the algorithm is parallelized. This study proposes a method that incorporates the GPU-based technique into phase demodulation calculations to reduce computation time. The proposed parallel algorithm was applied to a PROPELLER-EPI diffusion tensor data set. RESULTS: The GPU-based phase demodulation method reduced the EPI distortion correctly, and accelerated the computation. The total reconstruction time of the 16-slice PROPELLER-EPI diffusion tensor images with matrix size of 128 × 128 was reduced from 1,754 seconds to 101 seconds by utilizing the parallelized 4-GPU program. CONCLUSIONS: GPU computing is a promising method to accelerate EPI geometric correction. The resulting reduction in computation time of phase demodulation should accelerate postprocessing for studies performed with EPI, and should effectuate the PROPELLER-EPI technique for clinical practice.


Subject(s)
Artifacts , Brain/anatomy & histology , Computer Graphics/instrumentation , Echo-Planar Imaging/instrumentation , Echo-Planar Imaging/methods , Image Enhancement/instrumentation , Image Enhancement/methods , Algorithms , Equipment Design , Equipment Failure Analysis , Humans , Phantoms, Imaging , Reproducibility of Results , Sensitivity and Specificity
20.
Magn Reson Med ; 68(4): 1145-56, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22246786

ABSTRACT

Parallel imaging technique using localized gradients (PatLoc) uses the combination of surface gradient coils generating nonbijective curvilinear magnetic fields for spatial encoding. PatLoc imaging using one pair of multipolar spatial encoding magnetic fields (SEMs) has two major caveats: (1) The direct inversion of the encoding matrix requires exact determination of multiple locations which are ambiguously encoded by the SEMs. (2) Reconstructed images have a prominent loss of spatial resolution at the center of field-of-view using a symmetric coil array for signal detection. This study shows that a PatLoc system actually has a higher degree of freedom in spatial encoding to mitigate the two challenges mentioned above. Specifically, a PatLoc system can generate not only multipolar but also linear SEMs, which can be used to reduce the loss of spatial resolution at the field-of-view center. Here, we present an efficient and generalized image reconstruction method for PatLoc imaging using multiple SEMs without explicitly identifying the locations where SEM encoding is not unique. Reconstructions using simulations and empirical experimental data are compared with those using conventional linear gradients to demonstrate that the general combination of SEMs can improve image reconstructions.


Subject(s)
Algorithms , Brain/anatomy & histology , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Pattern Recognition, Automated/methods , Humans , Image Enhancement/methods , Magnetic Fields , Reproducibility of Results , Sensitivity and Specificity
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