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1.
J Med Virol ; 88(6): 954-60, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26547266

ABSTRACT

Noroviruses (NoVs) are the most common cause of acute gastroenteritis in both sporadic and outbreak cases. Genotyping and recombination analyses were performed in order to help getting more knowledge of the distribution and genetic diversity of NoVs in Suzhou, located in Jiangsu province of China. All stool samples were collected from hospitalized children younger than 5 years old with acute gastroenteritis. For genotyping, the open reading frame (ORF) 1 and ORF2 were partially amplified and sequenced. 26.9% of stool samples were positive for genogroup II NoVs. The most common genotype was GII.4 and its variants included Den Haag-2006b, New Orleans-2009, and Sydney-2012. The Den Haag-2006b variants predominated during 2010-2012. In 2013, it was replaced by the Sydney-2012 variant. The second most common genotype was GII.12/GII.3. NoVs could be detected throughout the year, with GII.4 and GII.12/GII.3 coexisting during the cold months, and GII.4 was the main genotype during the warm months. The highest prevalence of NoV was detected in young children aged <24 months. Patients infected with GII.4 had a higher chance of getting moderate fever than other NoV-positive patients, while those infected with GII.12/GII.3 tended to have a mild degree of fever. NoV is an important pathogen responsible for viral gastroenteritis among children in Suzhou. Analyses of NoV circulating between 2010 and 2013 revealed a change of predominant variant of NoV GII.4 in each epidemic season and intergenotype recombinant strains represented an important part.


Subject(s)
Caliciviridae Infections/epidemiology , Caliciviridae Infections/virology , Gastroenteritis/virology , Norovirus/genetics , Acute Disease , Capsid Proteins/genetics , Child, Preschool , China/epidemiology , Epidemics , Epidemiological Monitoring , Feces/virology , Female , Fever/virology , Genetic Variation , Genotype , Hospitalization , Humans , Infant , Infant, Newborn , Male , Norovirus/classification , Norovirus/pathogenicity , Phylogeny , Prevalence , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction , Seasons , Sequence Analysis, DNA
2.
Sichuan Da Xue Xue Bao Yi Xue Ban ; 41(1): 148-52, 2010 Jan.
Article in Chinese | MEDLINE | ID: mdl-20369492

ABSTRACT

OBJECTIVE: To determine residues of multiple biphenyl ether herbicides simultaneously in water using high performance liquid chromatography (HPLC) with cloud-point extraction. METHODS: The residues of eight biphenyl ether herbicides (including bentazone, fomesafen, acifluorfen, aclonifen, bifenox, fluoroglycofenethy, nitrofen, oxyfluorfen) in water samples were extracted with cloud-point extraction of Triton X-114. The analytes were separated and determined using reverse phase HPLC with ultraviolet detector at 300 nm. Optimized conditions for the pretreatment of water samples and the parameters of chromatographic separation applied. RESULTS: There was a good linear correlation between the concentration and the peak area of the analytes in the range of 0.05-2.00 mg/L (r = 0.9991-0.9998). Except bentazone, the spiked recoveries of the biphenyl ether herbicides in the water samples ranged from 80.1% to 100.9%, with relative standard deviations ranging from 2.70% to 6.40%. The detection limit of the method ranged from 0.10 microg/L to 0.50 microg/L. CONCLUSION: The proposed method is simple, rapid and sensitive, and can meet the requirements of determination of multiple biphenyl ether herbicides simultaneously in natural waters.


Subject(s)
Biphenyl Compounds/analysis , Chromatography, High Pressure Liquid/methods , Herbicides/analysis , Pesticide Residues/analysis , Water Pollutants, Chemical/analysis , Benzamides/analysis , Benzothiadiazines/analysis , Nitrobenzoates/analysis , Sensitivity and Specificity
3.
Zhonghua Liu Xing Bing Xue Za Zhi ; 30(4): 339-43, 2009 Apr.
Article in Chinese | MEDLINE | ID: mdl-19731523

ABSTRACT

OBJECTIVE: To determine the epidemiological features of hand-foot-and-mouth disease (HFMD) outbreaks and the genetic characteristics of enterovirus type 71(EV71) isolates from patients in Lianyungang, Jiangsu province in May, 2008. METHODS: Epidemiological, microbiological, cellular and molecular methods were performed to investigate pathogens and to describe the homogeneity of isolated strains. RESULTS: 21 cases were reported in this HFMD outbreak with the attack rate as 20.0%. 3 EV71 virus strains were isolated from 10 stool samples. The nucleotide and amino acid homogeneity of these 3 Jiangsu strain with Anhui Fuyang strains were 97.9%-100.0% and 99.7%-100.0%, respectively. These 4 Jiangsu strains were within genotype C sub-geno group C4 in phylogenetic tree. Data from the follow-up study showed that shedding of EV71 and Coxsackie A16 virus (CA16) in the latent period appeared in the outbreak of HFMD. Human beings could be infected by both EV71 virus and CA16 at the same time and could also carry the two viruses. We also discovered that EV71 virus could be expelled out of the human body through stool in the first week and last for 10 weeks. CONCLUSION: The recently identified EV71 isolates from this HFMD outbreak belonged to sub-geno group C4. Facts as: the release of viruses in the latent period, co-infection or coexisting of two viruses at the same time and super long period of expulsion of toxin exist in EV71 and CA16 did exist.


Subject(s)
Enterovirus A, Human/genetics , Hand, Foot and Mouth Disease/epidemiology , Adolescent , Adult , Child , Child, Preschool , China/epidemiology , Disease Outbreaks , Enterovirus A, Human/isolation & purification , Female , Genotype , Hand, Foot and Mouth Disease/virology , Humans , Infant , Male , Molecular Sequence Data , Phylogeny , Virus Shedding , Young Adult
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