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1.
bioRxiv ; 2024 May 23.
Article in English | MEDLINE | ID: mdl-38826423

ABSTRACT

Both neurons and glia communicate via diffusible neuromodulatory substances, but the substrates of computation in such neuromodulatory networks are unclear. During behavioral transitions in the larval zebrafish, the neuromodulator norepinephrine drives fast excitation and delayed inhibition of behavior and circuit activity. We find that the inhibitory arm of this feedforward motif is implemented by astroglial purinergic signaling. Neuromodulator imaging, behavioral pharmacology, and perturbations of neurons and astroglia reveal that norepinephrine triggers astroglial release of adenosine triphosphate, extracellular conversion into adenosine, and behavioral suppression through activation of hindbrain neuronal adenosine receptors. This work, along with a companion piece by Lefton and colleagues demonstrating an analogous pathway mediating the effect of norepinephrine on synaptic connectivity in mice, identifies a computational and behavioral role for an evolutionarily conserved astroglial purinergic signaling axis in norepinephrine-mediated behavioral and brain state transitions.

2.
Head Neck ; 2024 May 04.
Article in English | MEDLINE | ID: mdl-38702976

ABSTRACT

BACKGROUND: Positive surgical margin rates remain high in head and neck cancer surgery. Relocation is challenging given the complex, three-dimensional (3D) anatomy. METHODS: Prospective, multi-institutional study to determine accuracy of head and neck surgeons and pathologists relocating margins on virtual 3D specimen models using written descriptions from pathology reports. Using 3D models of 10 head and neck surgical specimens, each participant relocated 20 mucosal margins (10 perpendicular, 10 shave). RESULTS: A total of 32 participants, 23 surgeons and 9 pathologists, marked 640 margins. Of the 320 marked perpendicular margins, 49.7% were greater than 1 centimeter from the true margin with a mean relocation error of 10.2 mm. Marked shave margins overlapped with the true margin a mean 54% of the time, with no overlap in 44 of 320 (13.8%) shave margins. CONCLUSIONS: Surgical margin relocation is imprecise and challenging even for experienced surgeons and pathologists. New communication technologies are needed.

3.
Am J Rhinol Allergy ; 38(2): 102-107, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38155492

ABSTRACT

BACKGROUND: Epistaxis is a common reason for emergency department (ED) visits, accounting for approximately 1 of every 200 ED visits in the United States annually and up to one-third of all otolaryngology (ENT)-related ED encounters. OBJECTIVES: To detail reasons for ENT consultation for epistaxis in the ED, understand how consultation impacts patient care, assess follow-up patterns after emergency care, and study patient care after transfer or referral into the ED. METHODS: Retrospective chart review of 592 adult patients with epistaxis managed in a tertiary care ED setting between 2017 and 2018. Patients with known follow-up, ENT consult in the ED, or admission were included, while patients with trauma, recent head and neck surgery, or abnormal anatomy were excluded. RESULTS: The most common reasons for ENT consultation for epistaxis were for advanced management, referral to the ED from an outside facility or provider, and recent head and neck surgery. In total, 48.2% of patients treated for epistaxis in the ED received an ENT consultation. ENT consultation was associated with a higher likelihood of receiving absorbable or nonabsorbable packing (92.4% vs 36.1%). In total, 40.4% of patients referred into the ED from an outside facility or provider had no change in their management after receiving an ENT consult. Patients referred to the ED and White patients were significantly more likely to receive an ENT consult. Secondary analyses revealed that more White patients had an established outpatient ENT provider than patients of other races. On multivariate analysis, patients who received an ENT consult spent 75.2 min longer in the ED. CONCLUSION: The high percentage of patients referred or transferred to the ED for epistaxis management with no change in interventions after ENT consultation indicates a continued need to develop more precise clinical care pathways. Additionally, there may be gaps between White and non-White patients in access to ENT care.


Subject(s)
Epistaxis , Otolaryngology , Adult , Humans , Epistaxis/therapy , Retrospective Studies , Emergency Service, Hospital , Referral and Consultation
4.
Int Forum Allergy Rhinol ; 13(10): 1958-1961, 2023 10.
Article in English | MEDLINE | ID: mdl-36851905

ABSTRACT

KEY POINTS: Nearly half of all olfactory dysfunction (OD) clinical trials since 2010 are COVID-19-related. COVID-19-related OD trials are published significantly faster than COVID-19-unrelated trials. High-quality clinical trials and publications are crucial to discovering effective treatments.


Subject(s)
COVID-19 , Olfaction Disorders , Humans , SARS-CoV-2 , Olfaction Disorders/epidemiology , Olfaction Disorders/therapy , Smell
6.
Nat Biotechnol ; 39(6): 697-704, 2021 06.
Article in English | MEDLINE | ID: mdl-33510483

ABSTRACT

Although genomic analyses predict many noncanonical open reading frames (ORFs) in the human genome, it is unclear whether they encode biologically active proteins. Here we experimentally interrogated 553 candidates selected from noncanonical ORF datasets. Of these, 57 induced viability defects when knocked out in human cancer cell lines. Following ectopic expression, 257 showed evidence of protein expression and 401 induced gene expression changes. Clustered regularly interspaced short palindromic repeat (CRISPR) tiling and start codon mutagenesis indicated that their biological effects required translation as opposed to RNA-mediated effects. We found that one of these ORFs, G029442-renamed glycine-rich extracellular protein-1 (GREP1)-encodes a secreted protein highly expressed in breast cancer, and its knockout in 263 cancer cell lines showed preferential essentiality in breast cancer-derived lines. The secretome of GREP1-expressing cells has an increased abundance of the oncogenic cytokine GDF15, and GDF15 supplementation mitigated the growth-inhibitory effect of GREP1 knockout. Our experiments suggest that noncanonical ORFs can express biologically active proteins that are potential therapeutic targets.


Subject(s)
Cell Survival/physiology , Neoplasm Proteins/genetics , Neoplasms/pathology , Cell Line, Tumor , Clustered Regularly Interspaced Short Palindromic Repeats , HEK293 Cells , Humans , Neoplasm Proteins/physiology , Neoplasms/genetics , Open Reading Frames
7.
Nat Cancer ; 1(2): 235-248, 2020 02.
Article in English | MEDLINE | ID: mdl-32613204

ABSTRACT

Anti-cancer uses of non-oncology drugs have occasionally been found, but such discoveries have been serendipitous. We sought to create a public resource containing the growth inhibitory activity of 4,518 drugs tested across 578 human cancer cell lines. We used PRISM, a molecular barcoding method, to screen drugs against cell lines in pools. An unexpectedly large number of non-oncology drugs selectively inhibited subsets of cancer cell lines in a manner predictable from the cell lines' molecular features. Our findings include compounds that killed by inducing PDE3A-SLFN12 complex formation; vanadium-containing compounds whose killing depended on the sulfate transporter SLC26A2; the alcohol dependence drug disulfiram, which killed cells with low expression of metallothioneins; and the anti-inflammatory drug tepoxalin, which killed via the multi-drug resistance protein ABCB1. The PRISM drug repurposing resource (https://depmap.org/repurposing) is a starting point to develop new oncology therapeutics, and more rarely, for potential direct clinical translation.


Subject(s)
Neoplasms , Cell Line , Disulfiram , Drug Repositioning , Humans , Neoplasms/drug therapy
8.
Neuron ; 107(6): 1113-1123.e4, 2020 09 23.
Article in English | MEDLINE | ID: mdl-32679036

ABSTRACT

Disrupting memories that associate environmental cues with drug experiences holds promise for treating addiction, yet accessing the distributed neural network that stores such memories is challenging. Here, we show that the paraventricular nucleus of the thalamus (PVT) orchestrates the acquisition and maintenance of opiate-associated memories via projections to the central nucleus of the amygdala (CeA) and nucleus accumbens (NAc). PVT→CeA activity associates morphine reward to the environment, whereas transient inhibition of the PVT→NAc pathway during retrieval causes enduring protection against opiate-primed relapse. Using brain-wide activity mapping, we revealed distributed network activities that are altered in non-relapsing mice, which enabled us to find that activating the downstream NAc→lateral hypothalamus (LH) pathway also prevents relapse. These findings establish the PVT as a key node in the opiate-associated memory network and demonstrate the potential of targeting the PVT→NAc→LH pathway for treating opioid addiction.


Subject(s)
Amygdala/physiopathology , Nucleus Accumbens/physiopathology , Opioid-Related Disorders/physiopathology , Paraventricular Hypothalamic Nucleus/physiopathology , Repetition Priming , Animals , Cues , Male , Mice , Mice, Inbred C57BL , Neural Pathways/physiopathology
9.
J Environ Manage ; 196: 80-90, 2017 Jul 01.
Article in English | MEDLINE | ID: mdl-28284142

ABSTRACT

The aim of this research was to assess the spatial and temporal distribution of surface water pollution within a reticular canal system typical of those found in the lower Yangtze River Delta (YRD). For this purpose, surface water quality data was collected from a drainage canal that bisected the southeast district of Ningbo Municipality (Zhejiang) from 2013 to 2015. The sampling transect was designed to represent the change in land-use from the agriculture dominated rural hinterland, to the predominantly urban city-centre. To calculate the representative land-use fraction of each sampling location, the contributing area was defined using an uni-directional 1 km vector line-buffer around the 'upstream' section of canal. The spatial and temporal variation of EC, DO, NH3 and turbidity indicated a measureable difference between the urban and rural sections of the channel. Water quality indicators were most sensitive to urban and parkland land-use types. The study yielded an increased spatial resolution to knowledge of water-quality variability in the urban environment compared to previous studies within the YRD region. The results were used to make recommendations for the development of an effective long-term strategy for the improvement in surface water quality in this region.


Subject(s)
Environmental Monitoring , Water Quality , China , Cities , Rivers , Water Pollution
10.
Prostate ; 75(15): 1790-801, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26332453

ABSTRACT

BACKGROUND: Altered DNA methylation in CpG islands of gene promoters has been implicated in prostate cancer (PCa) progression and can be used to predict disease outcome. In this study, we determine whether methylation changes of androgen biosynthesis pathway (ABP)-related genes in patients' plasma cell-free DNA (cfDNA) can serve as prognostic markers for biochemical recurrence (BCR). METHODS: Methyl-binding domain capture sequencing (MBDCap-seq) was used to identify differentially methylated regions (DMRs) in primary tumors of patients who subsequently developed BCR or not, respectively. Methylation pyrosequencing of candidate loci was validated in cfDNA samples of 86 PCa patients taken at and/or post-radical prostatectomy (RP) using univariate and multivariate prediction analyses. RESULTS: Putative DMRs in 13 of 30 ABP-related genes were found between tumors of BCR (n = 12) versus no evidence of disease (NED) (n = 15). In silico analysis of The Cancer Genome Atlas data confirmed increased DNA methylation of two loci-SRD5A2 and CYP11A1, which also correlated with their decreased expression, in tumors with subsequent BCR development. Their aberrant cfDNA methylation was also associated with detectable levels of PSA taken after patients' post-RP. Multivariate analysis of the change in cfDNA methylation at all of CpG sites measured along with patient's treatment history predicted if a patient will develop BCR with 77.5% overall accuracy. CONCLUSIONS: Overall, increased DNA methylation of SRD5A2 and CYP11A1 related to androgen biosynthesis functions may play a role in BCR after patients' RP. The correlation between aberrant cfDNA methylation and detectable PSA in post-RP further suggests their utility as predictive markers for PCa recurrence. .


Subject(s)
3-Oxo-5-alpha-Steroid 4-Dehydrogenase/genetics , Cholesterol Side-Chain Cleavage Enzyme/genetics , DNA Methylation , Membrane Proteins/genetics , Neoplasm Recurrence, Local/genetics , Prostatic Neoplasms/genetics , Aged , Biomarkers, Tumor/genetics , CpG Islands , Disease-Free Survival , Humans , Male , Middle Aged , Neoplasm Recurrence, Local/pathology , Promoter Regions, Genetic , Prostate/pathology , Prostate/surgery , Prostatectomy , Prostatic Neoplasms/pathology , Prostatic Neoplasms/surgery , Risk Factors
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