Co-occurrence pattern of congeneric tree species provides conflicting evidence for competition relatedness hypothesis.

In plants, negative reproductive interaction among closely related species (i.e., reproductive interference) is known to hamper the coexistence of congeneric species while facilitation can increase species persistence. Since reproductive interference in plants may occur through interspecific pollination, the effective range of reproductive interference may reflects the spatial range of interspecific pollination. Therefore, we hypothesized that the coexistence of congeners on a small spatial scale would be less likely to occur by chance but that such coexistence would be likely to occur on a scale larger than interspecific pollination frequently occur. In the present study, we tested this hypothesis using spatially explicit woody plant survey data. Contrary to our prediction, congeneric tree species often coexisted at the finest spatial scale and significant exclusive distribution was not detected. Our results suggest that cooccurrence of congeneric tree species is not structured by reproductive interference, and they indicate the need for further research to explore the factors that mitigate the effects of reproductive interference.

Identifying the vegetation type in Google Earth images using a convolutional neural network: a case study for Japanese bamboo forests.

BACKGROUND: Classifying and mapping vegetation are crucial tasks in environmental science and natural resource management. However, these tasks are difficult because conventional methods such as field surveys are highly labor-intensive. Identification of target objects from visual data using computer techniques is one of the most promising techniques to reduce the costs and labor for vegetation mapping. Although deep learning and convolutional neural networks (CNNs) have become a new solution for image recognition and classification recently, in general, detection of ambiguous objects such as vegetation is still difficult. In this study, we investigated the effectiveness of adopting the chopped picture method, a recently described protocol for CNNs, and evaluated the efficiency of CNN for plant community detection from Google Earth images. RESULTS: We selected bamboo forests as the target and obtained Google Earth images from three regions in Japan. By applying CNN, the best trained model correctly detected over 90% of the targets. Our results showed that the identification accuracy of CNN is higher than that of conventional machine learning methods. CONCLUSIONS: Our results demonstrated that CNN and the chopped picture method are potentially powerful tools for high-accuracy automated detection and mapping of vegetation.

Skewed male reproductive success and pollen transfer in a small fragmented population of the heterodichogamous tree Machilus thunbergii.

Heterodichogamy is defined as the presence of two flower morphs that exhibit the male and female functions at different times among individuals within a population. Heterodichogamy is regarded as an adaptation to promote outcrossing through enhanced inter-morph mating, together with a 1:1 morph ratio. However, in highly fragmented populations, the morph ratio may be more likely to be biased by stochastic events. In such a situation, individuals of a minority morph within a population are expected to have higher reproductive success than those of a majority morph, which may suffer from pollen shortages of the minority morph. In this paper, we evaluated mating patterns and male reproductive success in a highly fragmented population of Machilus thunbergii, a putative heterodichogamous evergreen laurel tree. Results of paternity analysis indicated that the selfing rate was not clearly different between the two morphs. In contrast, the proportion of intra-morph mating was higher in the majority-morph (MM) mother trees than in the minority-morph (MF) mother trees. Bayesian estimated male reproductive success indicated that male reproductive success was higher in minority-morph (MF) than in majority-morph (MM) mother trees. These findings indicate that (1) the majority morph mothers, suffering a shortage of the opposite morph pollen, could partly compensate for the reduced reproductive success by intra-morph mating rather than by selfing, and (2) negative-frequency dependent selection may be involved in the maintenance of the two morphs.

Superconducting gap anisotropy sensitive to nematic domains in FeSe.

The structure of the superconducting gap in unconventional superconductors holds a key to understand the momentum-dependent pairing interactions. In superconducting FeSe, there have been controversial results reporting nodal and nodeless gap structures, raising a fundamental issue of pairing mechanisms of iron-based superconductivity. Here, by utilizing polarization-dependent laser-excited angle-resolved photoemission spectroscopy, we report a detailed momentum dependence of the gap in single- and multi-domain regions of orthorhombic FeSe crystals. We confirm that the superconducting gap has a twofold in-plane anisotropy, associated with the nematicity due to orbital ordering. In twinned regions, we clearly find finite gap minima near the vertices of the major axis of the elliptical zone-centered Fermi surface, indicating a nodeless state. In contrast, the single-domain gap drops steeply to zero in a narrow angle range, evidencing for nascent nodes. Such unusual node lifting in multi-domain regions can be explained by the nematicity-induced time-reversal symmetry breaking near the twin boundaries.

Unconventional Superconductivity in the BiS_{2}-Based Layered Superconductor NdO_{0.71}F_{0.29}BiS_{2}.

We investigate the superconducting-gap anisotropy in one of the recently discovered BiS_{2}-based superconductors, NdO_{0.71}F_{0.29}BiS_{2} (T_{c}∼5 K), using laser-based angle-resolved photoemission spectroscopy. Whereas the previously discovered high-T_{c} superconductors such as copper oxides and iron-based superconductors, which are believed to have unconventional superconducting mechanisms, have 3d electrons in their conduction bands, the conduction band of BiS_{2}-based superconductors mainly consists of Bi 6p electrons, and, hence, the conventional superconducting mechanism might be expected. Contrary to this expectation, we observe a strongly anisotropic superconducting gap. This result strongly suggests that the pairing mechanism for NdO_{0.71}F_{0.29}BiS_{2} is an unconventional one and we attribute the observed anisotropy to competitive or cooperative multiple paring interactions.

Spin-dependent quantum interference in photoemission process from spin-orbit coupled states.

Spin-orbit interaction entangles the orbitals with the different spins. The spin-orbital-entangled states were discovered in surface states of topological insulators. However, the spin-orbital-entanglement is not specialized in the topological surface states. Here, we show the spin-orbital texture in a surface state of Bi(111) by laser-based spin- and angle-resolved photoelectron spectroscopy (laser-SARPES) and describe three-dimensional spin-rotation effect in photoemission resulting from spin-dependent quantum interference. Our model reveals that, in the spin-orbit-coupled systems, the spins pointing to the mutually opposite directions are independently locked to the orbital symmetries. Furthermore, direct detection of coherent spin phenomena by laser-SARPES enables us to clarify the phase of the dipole transition matrix element responsible for the spin direction in photoexcited states. These results permit the tuning of the spin polarization of optically excited electrons in solids with strong spin-orbit interaction.

Attosecond streaking measurement of extreme ultraviolet pulses using a long-wavelength electric field.

Long-wavelength lasers have great potential to become a new-generation drive laser for tabletop coherent light sources in the soft X-ray region. Because of the significantly low conversion efficiency from a long-wavelength light field to high-order harmonics, their pulse characterization has been carried out by measuring the carrier-envelope phase and/or spatial dependences of high harmonic spectra. However, these photon detection schemes, in general, have difficulty in obtaining information on the spectral phases, which is crucial to determine the temporal structures of high-order harmonics. Here, we report the first attosecond streaking measurement of high harmonics generated by few-cycle optical pulses at 1.7 µm from a BiB3O6-based optical parametric chirped-pulse amplifier. This is also the first demonstration of time-resolved photoelectron spectroscopy using high harmonics from a long-wavelength drive laser other than Ti:sapphire lasers, which paves the way towards ultrafast soft X-ray photoelectron spectroscopy.

Phase-matched frequency conversion below 150 nm in KBe2BO3F2.

Sum frequency mixing has been demonstrated below 150 nm in KBeBO3F2 by using the fundamental with its fourth harmonic of a 6 kHz Ti: sapphire laser system. The wavelength of 149.8 nm is the shortest ever obtained to our knowledge by phase matching in nonlinear crystals. The output powers were 3.6 µW at 149.8 nm and 110 µW at 154.0 nm, respectively. The phase matching angles measured from 149.8 to 158.1 nm are larger by 3-4 degrees than those expected from the existing Sellmeier equation. The measured transmission spectra of KBeBO3F2 crystals support the generation of coherent radiation below 150 nm.

High-resolution three-dimensional spin- and angle-resolved photoelectron spectrometer using vacuum ultraviolet laser light.

We describe a spin- and angle-resolved photoelectron spectroscopy (SARPES) apparatus with a vacuum-ultraviolet (VUV) laser (hν = 6.994 eV) developed at the Laser and Synchrotron Research Center at the Institute for Solid State Physics, The University of Tokyo. The spectrometer consists of a hemispherical photoelectron analyzer equipped with an electron deflector function and twin very-low-energy-electron-diffraction-type spin detectors, which allows us to analyze the spin vector of a photoelectron three-dimensionally with both high energy and angular resolutions. The combination of the high-performance spectrometer and the high-photon-flux VUV laser can achieve an energy resolution of 1.7 meV for SARPES. We demonstrate that the present laser-SARPES machine realizes a quick SARPES on the spin-split band structure of a Bi(111) film even with 7 meV energy and 0.7(∘) angular resolutions along the entrance-slit direction. This laser-SARPES machine is applicable to the investigation of spin-dependent electronic states on an energy scale of a few meV.

Range expansion and lineage admixture of the Japanese evergreen tree Machilus thunbergii in central Japan.

We investigated the range expansion histories of Machilus thunbergii populations in the Kinki region of central Japan on the basis of nuclear microsatellite data. In the Kinki region, M. thunbergii is typically found in the coastal area, with some fragmented populations inland, around Lake Biwa. Phylogenetic and Bayesian clustering analysis (STRUCTURE analysis) revealed that the inland populations have different genetic components between the west and east sides of Lake Biwa. The population located on the north side of the lake has an admixture of the two genetically differentiated lineages, contributing to an increase in the genetic diversity of the population. Populations around Lake Biwa had lost rare alleles and the F value obtained from STRUCTURE analysis was lower in the coastal populations than in the lake populations. These results suggest that populations around Lake Biwa experienced a bottleneck due to a founder effect during the initial migration to the lake and that glacial refugia of M. thunbergii in the Kinki region existed along the coast.

Wavefront analysis of high-efficiency, large-scale, thin transmission gratings.

Large-scale (180 × 60 × 1 mm(3)) transmission gratings with groove densities of 1250 and 1740 lines/mm have been developed, resulting in diffraction efficiencies above 95%. The throughput of a folded pulse compressor with two large-scale transmission gratings was approximately 80% in a 20-fs Ti:sapphire chirped-pulse amplification (CPA) laser. The parabolic bending of the transmission grating due to anti-reflection (AR) coating was minimized to 2.9 λ at 633 nm by improving the evaporation process. By a simple analysis, we explain why this level of bending does not induce a wavefront distortion through the transmission grating near the Littrow condition while the wavefront from a reflection grating is distorted to nearly twice the bending of the grating. The calculation based on the measured bending shows that both the group delay difference relative to the ideally flat grating from 750 to 850 nm and the spatial pulse front distortion over a 60-mm-diameter input beam are negligible, even when the dispersive beam covers ~140 mm on the grating. The spatial pulse front distortion measured after the compressor was less than the measurement limit (1.5 fs) for a 20-mm-diameter beam, where the beam size in the dispersive direction on the grating was 85 mm.

Carrier-envelope phase-dependent high harmonic generation in the water window using few-cycle infrared pulses.

High harmonic generation (HHG) using waveform-controlled, few-cycle pulses from Ti:sapphire lasers has opened emerging researches in strong-field and attosecond physics. However, the maximum photon energy of attosecond pulses via HHG remains limited to the extreme ultraviolet region. Long-wavelength light sources with carrier-envelope phase stabilization are promising to extend the photon energy of attosecond pulses into the soft X-ray region. Here we demonstrate carrier-envelope phase-dependent HHG in the water window using sub-two-cycle optical pulses at 1,600 nm. Experimental and simulated results indicate the confinement of soft X-ray emission in a single recombination event with a bandwidth of 75 eV around the carbon K edge. Control of high harmonics by the waveform of few-cycle infrared pulses is a key milestone to generate soft X-ray attosecond pulses. We measure a dependence of half-cycle bursts on the gas pressure, which indicates subcycle deformation of the waveform of the infrared drive pulses in the HHG process.

10-MHz, Yb-fiber chirped-pulse amplifier system with large-scale transmission gratings.

Large-scale transmission gratings were produced for a stretcher and a compressor in the Yb-fiber chirped-pulse amplification system. A 23-W, 200-fs laser system with a 10-MHz repetition rate was demonstrated. Focused intensity as high as 10(14) W/cm(2) was achieved, which is high enough for multi-photon processes such as high-order harmonics generation and multi-photon ionization of neutral atoms. High-order harmonics up to 7th order were observed using Xe gas as a nonlinear medium.

Development of microsatellites in Machilus thunbergii (Lauraceae), a warm-temperate coastal tree species in Japan.

PREMISE OF THE STUDY: Microsatellite markers were developed and characterized in a typically coastal, widespread, and dominant tree species of the evergreen broadleaf forests, Machilus thunbergii, for comparison of the genetic diversity and structure of inland populations surrounding the ancient Lake Biwa and coastal populations in Japan. METHODS AND RESULTS: Eighteen polymorphic microsatellites of this species were isolated using an improved technique for isolating codominant compound microsatellite markers. These isolated loci provided compound simple sequence repeat (SSR) markers with polymorphisms of three to 19 alleles per locus, with an average of 10.9. The expected and observed within-population heterozygosities ranged from 0.16 to 0.86 and from 0.13 to 0.72, respectively. CONCLUSIONS: These markers may be useful tools for further investigation of the population genetic structure and biogeographic history of M. thunbergii in the warm-temperate zone of East Asia.

Generation of ultrashort 25-µJ pulses at 200 nm by dual broadband frequency doubling with a thin KBe2BO3F2 crystal.

Ultrashort pulses with a 25-µJ output energy were generated at 200 nm by dual broadband frequency doubling with a thin KBe(2)BO(3)F(2) (KBBF) crystal at 1 kHz as the fourth harmonic of a high power Ti:sapphire laser. The spectrum was broadened to a spectral width of 2.25 nm. The pulse duration of 56 fs was measured by single-shot autocorrelation with two-photon fluorescence from self-trapped excitons in a CaF(2) crystal.

Generation of soft x-ray and water window harmonics using a few-cycle, phase-locked, optical parametric chirped-pulse amplifier.

Multimillijoule, few-cycle, carrier-envelope-phase (CEP)-locked, near-IR pulses at 750 nm from an optical parametric chirped-pulse amplifier are applied to the generation of CEP-dependent, soft x-ray high harmonics around the boron K-edge at 188 eV. The dependence on the CEP manifests the phase coherence of high harmonics preserved in the highest-photon energy ever reported. Multimillijoule optical pulses also allow the extension of the cutoff energy up to 325 eV, exceeding the carbon K-edge of the water window. However, in this spectral range, the CEP dependence of harmonic spectra is not observed, suggesting the degradation of temporal coherence due to the heavy ionization of helium atoms.

Coherent quasi-cw 153 nm light source at 33 MHz repetition rate.

We present a quasi-cw laser in a vacuum ultraviolet region at megahertz repetition rate. The narrowband pulses generated from an ytterbium-fiber laser system at 33 MHz repetition rate at the central wavelength of 1074 nm are frequency-converted by successive stages of LiB(3)O(5) crystals and KBe(2)BO(3)F(2) crystals. The generated radiation at 153 nm has the shortest wavelength achieved through phase-matched frequency conversion processes in nonlinear optical crystals to our knowledge.

Self-compensation of third-order dispersion for ultrashort pulse generation demonstrated in an Yb fiber oscillator.

Compensation of the intracavity dispersion in the mode-locked oscillator is known to be one of the most important factors for ultrashort pulse generation. However, recent investigations of a Yb-doped fiber mode-locked oscillator revealed that precise third-order dispersion (TOD) compensation is not always necessary for ultrashort pulse generation, owing to the strong nonlinearity that compensates residual TOD without reducing its spectral bandwidth. The origin of the nonlinear TOD compensation has remained unclear. To investigate the process in detail, we studied the pulse evolution inside a 30 fs Yb-doped fiber mode-locked oscillator both experimentally and numerically, and we found that the nonlinear phase shift with a temporally asymmetric pulse shape introduces an appropriate amount of TOD that exactly cancels the residual cavity dispersion.

Generation of quasi-continuous-wave vacuum-ultraviolet coherent light by fourth-harmonic of a Ti:sapphire laser with KBBF crystal.

We report the generation of quasi-continuous-wave vacuum-ultraviolet (VUV) coherent light based on a Ti:sapphire laser with two successive frequency doubling stages. In the first stage, UV light at 399 nm with power of 1.1 W was obtained by exploiting an enhanced cavity. With a KBBF crystal as nonlinear material, quasi-continuous-wave VUV coherent light with power of about 25 mW at 199.5 nm and 4.7 mW at 193.5 nm were achieved through a single-pass SHG configuration, respectively, in the second stage.

Watt-level tunable deep ultraviolet light source by a KBBF prism-coupled device.

We have obtained an average output power as much as 1.2 W at 200 nm by using a 2.71-mm thick KBe2BO3F2 crystal optically contacted by CaF2 and SiO2 prisms on the both sides. Watt-level average-power was generated tunably in the deep ultraviolet region from 185 nm to 200 nm. The average power is the highest, to our knowledge, ever obtained by nonlinear crystals in the wavelength region below 200 nm.