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1.
Mol Ecol ; 12(11): 3085-95, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14629388

ABSTRACT

Arbuscular mycorrhizal (AM) fungi are biotrophic symbionts colonizing the majority of land plants, and are of major importance in plant nutrient supply. Their diversity is suggested to be an important determinant of plant community structure, but the influence of host-plant and environmental factors on AM fungal community in plant roots is poorly documented. Using the terminal restriction fragment length polymorphism (T-RFLP) strategy, the diversity of AM fungi was assessed in 89 roots of three grass species (Agrostis capillaris, Festuca rubra, Poa pratensis) that co-occurred in the same plots of a field experiment. The impact of different soil amendments (nitrogen, lime, nitrogen and lime) and insecticide application on AM fungal community was also studied. The level of diversity found in AM fungal communities using the T-RFLP strategy was consistent with previous studies based on clone libraries. Our results clearly confirm that an AM fungal host-plant preference exists, even between different grass species. AM communities colonizing A. capillaris were statistically different from the others (P < 0.05). Although grass species evenness changed in amended soils, AM fungal community composition in roots of a given grass species remained stable. Conversely, in plots where insecticide was applied, we found higher AM fungal diversity and, in F. rubra roots, a statistically different AM fungal community.


Subject(s)
Genetic Variation/drug effects , Mycorrhizae/genetics , Soil , Symbiosis , Analysis of Variance , Calcium Compounds/pharmacology , Electrophoresis, Agar Gel , Genetic Variation/genetics , Insecticides/pharmacology , Mycorrhizae/physiology , Nitrogen/pharmacology , Oxides/pharmacology , Phylogeny , Poaceae/physiology , Polymorphism, Restriction Fragment Length , Population Dynamics , Principal Component Analysis , Scotland , Species Specificity
2.
Mol Ecol ; 11(8): 1555-64, 2002 Aug.
Article in English | MEDLINE | ID: mdl-12144674

ABSTRACT

Arbuscular mycorrhizal (AM) fungi are biotrophic symbionts colonizing about two-thirds of land plant species and found in all ecosystems. They are of major importance in plant nutrient supply and their diversity is suggested to be an important determinant of plant community composition. The diversity of the AM fungal community composition in the roots of two plant species (Agrostis capillaris and Trifolium repens) that co-occurred in the same grassland ecosystem was characterized using molecular techniques. We analysed the small subunit (SSU) ribosomal RNA gene amplified from a total root DNA extract using AM fungal-specific primers. A total of 2001 cloned fragments from 47 root samples obtained on four dates were analysed by restriction fragment length polymorphism, and 121 of them were sequenced. The diversity found was high: a total of 24 different phylotypes (groups of phylogenetically related sequences) colonized the roots of the two host species. Phylogenetic analyses demonstrate that 19 of these phylotypes belonged to the Glomaceae, three to the Acaulosporaceae and two to the Gigasporaceae. Our study reveals clearly that the AM fungal community colonizing T. repens differed from that colonizing A. capillaris, providing evidence for AM fungal host preference. In addition, our results reveal dynamic changes in the AM fungal community through time.


Subject(s)
Ecosystem , Fungi/genetics , Poaceae/microbiology , Trifolium/microbiology , Fungi/classification , Phylogeny , Plant Roots/microbiology , Polymorphism, Restriction Fragment Length , RNA, Ribosomal/analysis , RNA, Ribosomal/genetics , Symbiosis
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