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1.
Eur Phys J E Soft Matter ; 22(1): 97-106, 2007 Jan.
Article in English | MEDLINE | ID: mdl-17318287

ABSTRACT

The behavior of two membranes that interact by active adhesion molecules or stickers is studied theoretically using mean-field theory and Monte Carlo simulations. The stickers are anchored in one of the membranes and undergo conformational transitions between on and off states. In their on states, the stickers can bind to ligands that are anchored in the other membrane. The transitions between the on and off states arise from the coupling of the stickers to some active, energy-releasing process, which keeps the system out of equilibrium. As one varies the transition rates of this active process, the membrane separation undergoes a stochastic resonance: this separation is maximal at intermediate rates of the sticker transitions and considerably smaller both at high and at low transition rates. This implies that the effective, fluctuation-induced repulsion between the membranes contains a rate-dependent contribution that arises from the switching of the active stickers.


Subject(s)
Cell Membrane/metabolism , Stochastic Processes , Cell Adhesion , Computer Simulation , Hot Temperature , Models, Statistical , Molecular Conformation , Monte Carlo Method , Probability , Temperature
2.
Eur Phys J E Soft Matter ; 12(2): 265-273, 2003 Oct.
Article in English | MEDLINE | ID: mdl-15007662

ABSTRACT

Biological and biomimetic membranes often contain aggregates of embedded or adsorbed macromolecules. In this paper, the indirect interactions of cylindrical objects adhering to a planar membrane are considered theoretically. The adhesion of the cylinders causes a local perturbation of the equilibrium membrane shape, which leads to membrane-mediated interactions. For a planar membrane under lateral tension, the interaction is repulsive for a pair of cylinders adhering to the same side of the membrane, and attractive for cylinders adhering at opposite membrane sides. For a membrane in an external harmonic potential, the interaction of adsorbed cylinders is always attractive and increases if forces perpendicular to the membrane act on the cylinders.


Subject(s)
Cell Adhesion/physiology , Cell Membrane/physiology , Lipid Bilayers/chemistry , Lipid Bilayers/metabolism , Membranes, Artificial , Models, Biological , Models, Chemical , Static Electricity , Adsorption , Binding Sites , Computer Simulation , Elasticity , Membrane Fluidity , Stress, Mechanical , Surface Properties
3.
Eur Phys J E Soft Matter ; 8(1): 59-66, 2002 May.
Article in English | MEDLINE | ID: mdl-15010982

ABSTRACT

Biomimetic membranes in contact with a planar substrate or a second membrane are studied theoretically. The membranes contain specific adhesion molecules (stickers) which are attracted by the second surface. In the absence of stickers, the trans-interaction between the membrane and the second surface is assumed to be repulsive at short separations. It is shown that the interplay of specific attractive and generic repulsive interactions can lead to the formation of a potential barrier. This barrier induces a line tension between bound and unbound membrane segments which results in lateral phase separation during adhesion. The mechanism for adhesion-induced phase separation is rather general, as is demonstrated by considering two distinct cases involving: i) stickers with a linear attractive potential, and ii) stickers with a short-ranged square-well potential. In both cases, membrane fluctuations reduce the potential barrier and, therefore, decrease the tendency of phase separation.

4.
Phys Rev E Stat Nonlin Soft Matter Phys ; 64(1 Pt 1): 011903, 2001 Jul.
Article in English | MEDLINE | ID: mdl-11461284

ABSTRACT

Biomimetic membranes that contain several molecular components are studied theoretically. In contact with another surface, such as a solid substrate or another membrane, some of these intramembrane components are attracted by the second surface and, thus, act as local stickers. The cooperative behavior of these systems is characterized by the interplay of (i) attractive binding energies, (ii) entropic contributions arising from the shape fluctuations of the membranes, and (iii) the entropy of mixing of the stickers. A systematic study of this interplay, which starts from the corresponding partition functions, reveals that there are several distinct mechanisms for adhesion-induced phase separation within the membranes. The first of these mechanisms is effective for flexible stickers with attractive cis interactions (within the same membrane) and arises from the renormalization of these interactions by the confined membrane fluctuations. A second, purely entropic mechanism is found for rigid stickers without attractive cis interactions and arises from a fluctuation-induced line tension. Finally, a third mechanism is present if the membrane contains both stickers and repellers, i.e., nonadhesive molecules that protrude from the membrane surface. This third mechanism is based on an effective potential barrier and becomes less effective if the shape fluctuations of the membrane become more pronounced.


Subject(s)
Biophysics/methods , Cell Adhesion , Cell Membrane/chemistry , Membranes, Artificial , Entropy , Lipid Bilayers/chemistry , Models, Statistical , Monte Carlo Method , Temperature
5.
Article in English | MEDLINE | ID: mdl-11088521

ABSTRACT

Multicomponent membranes in contact with another surface or wall are studied by a variety of theoretical methods and Monte Carlo simulations. The membranes contain adhesion molecules which are attracted to the wall and, thus, act as local stickers. It is shown that this system undergoes lateral phase separation leading to discontinuous unbinding transitions if the adhesion molecules are larger than the nonadhesive membrane components. This process is driven by an effective line tension which depends on the size of the stickers and arises from the interplay of shape fluctuations and sticker clusters.


Subject(s)
Cell Adhesion Molecules/metabolism , Cell Membrane/chemistry , Cell Membrane/metabolism , Cell Adhesion Molecules/chemistry , Computer Simulation , Membrane Lipids/chemistry , Membrane Lipids/metabolism , Models, Biological , Monte Carlo Method , Particle Size , Tissue Adhesions
6.
J Mol Biol ; 303(4): 583-92, 2000 Nov 03.
Article in English | MEDLINE | ID: mdl-11054293

ABSTRACT

Hsp90 is an abundant molecular chaperone that functions in an ATP-dependent manner in vivo. The ATP-binding site is located in the N-terminal domain of Hsp90. Here, we dissect the ATPase cycle of Hsp90 kinetically. We find that Hsp90 binds ATP with a two-step mechanism. The rate-limiting step of the ATPase cycle is the hydrolysis of ATP. Importantly, ATP becomes trapped and committed to hydrolyze during the cycle. In the isolated ATP-binding domain of Hsp90, however, the bound ATP was not committed and the turnover numbers were markedly reduced. Analysis of a series of truncation mutants of Hsp90 showed that C-terminal regions far apart in sequence from the ATP-binding domain are essential for trapping the bound ATP and for maximum hydrolysis rates. Our results suggest that ATP binding and hydrolysis drive conformational changes that involve the entire molecule and lead to repositioning of the N and C-terminal domains of Hsp90.


Subject(s)
Adenosine Triphosphatases/chemistry , Adenosine Triphosphatases/metabolism , Adenosine Triphosphate/metabolism , HSP90 Heat-Shock Proteins/chemistry , HSP90 Heat-Shock Proteins/metabolism , Yeasts/enzymology , Adenosine Diphosphate/metabolism , Adenosine Triphosphatases/genetics , Binding Sites , Catalysis , HSP90 Heat-Shock Proteins/genetics , Hydrolysis , Kinetics , Models, Chemical , Protein Structure, Tertiary , Sequence Deletion/genetics , Yeasts/chemistry , Yeasts/genetics
7.
J Mol Biol ; 293(3): 685-91, 1999 Oct 29.
Article in English | MEDLINE | ID: mdl-10543959

ABSTRACT

p23 is a co-chaperone of the heat shock protein Hsp90. p23 binds to Hsp90 in its ATP-bound state and, on its own, interacts specifically with non-native proteins. In our attempt to correlate these functions to specific regions of p23 we have identified an unstructured region in p23 that maps to the C-terminal part of the protein sequence. This unstructured region is dispensible for interaction of p23 with Hsp90, since truncated p23 can still form complexes with Hsp90. In contrast, however, truncation of the C-terminal 30 amino acid residues of p23 affects the ability of p23 to bind non-native proteins and to prevent their non-specific aggregation. The isolated C-terminal region itself is not able to act as a chaperone nor is it possible to complement truncated p23 by addition of this peptide. These results imply that the binding site for Hsp90 is contained in the folded domain of p23 and that for efficient interaction of p23 with non-native proteins both the folded domain and the C-terminal unstructured region are required.


Subject(s)
HSP90 Heat-Shock Proteins/metabolism , Molecular Chaperones/chemistry , Molecular Chaperones/metabolism , Adenosine Triphosphate/metabolism , Binding Sites , Circular Dichroism , Citrate (si)-Synthase/chemistry , Citrate (si)-Synthase/metabolism , Endopeptidase K/metabolism , Humans , Molecular Chaperones/genetics , Molecular Chaperones/isolation & purification , Molecular Weight , Peptide Fragments/chemistry , Peptide Fragments/genetics , Peptide Fragments/isolation & purification , Peptide Fragments/metabolism , Protein Binding , Protein Denaturation , Protein Folding , Protein Structure, Secondary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sequence Deletion/genetics , Structure-Activity Relationship
8.
Mol Microbiol ; 34(4): 701-13, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10564510

ABSTRACT

The molecular chaperone Hsp90 is a regulatory component of some key signalling proteins in the cytosol of eukaryotic cells. For some of these functions, its interaction with co-chaperones is required. Limited proteolysis defined stable folded units of Hsp90. Both an N-terminal (N210) and a C-terminal (262C) fragment interact with non-native substrate proteins in vitro, but with different specificity and ATP dependence. Here, we analysed the functional properties of these Hsp90 fragments in vivo and in vitro. We determined their influence on the general viability and cell growth of Saccharomyces cerevisiae. Expression of N210 or 262C resulted in a dominant-negative phenotype in several yeast strains tested. Their expression was not toxic, but inhibited cell growth. Further, both were unable to restore viability to Hsp90-depleted cells. In addition, N210 and 262C influence the maturation of Hsp90 substrates, such as the glucocorticoid receptor and pp60v-Src kinase. Specifically, 262C forms partially active chaperone complexes, leading to an arrest of the chaperoned substrate at a certain stage of its maturation cycle. This demonstrates the requirement of a sophisticated and cofactor-regulated interplay between N- and C-terminal activities for Hsp90 function in vivo.


Subject(s)
HSP90 Heat-Shock Proteins/physiology , Saccharomyces cerevisiae/physiology , Cell Division/physiology , HSP90 Heat-Shock Proteins/chemistry , Oncogene Protein pp60(v-src)/physiology , Peptide Fragments , Protein Conformation , Protein Structure, Tertiary , Receptors, Progesterone/physiology
10.
Proc Natl Acad Sci U S A ; 95(4): 1495-9, 1998 Feb 17.
Article in English | MEDLINE | ID: mdl-9465043

ABSTRACT

The abundant molecular chaperone Hsp90 is a key regulator of protein structure in the cytosol of eukaryotic cells. Although under physiological conditions a specific subset of proteins is substrate for Hsp90, under stress conditions Hsp90 seems to perform more general functions. However, the underlying mechanism of Hsp90 remained enigmatic. Here, we analyzed the function of conserved Hsp90 domains. We show that Hsp90 possesses two chaperone sites located in the N- and C-terminal fragments, respectively. The C-terminal fragment binds to partially folded proteins in an ATP-independent way potentially regulated by cochaperones. The N-terminal domain contains a peptide binding site that seems to bind preferentially peptides longer than 10 amino acids. Peptide dissociation is induced by ATP binding. Furthermore, the antitumor drug geldanamycin both inhibits the weak ATPase of Hsp90 and stimulates peptide release. We propose that the existence of two functionally different chaperone sites together with a substrate-selecting set of cochaperones allows Hsp90 to guide the folding of a subset of target proteins and, at the same time, to exhibit general chaperone functions.


Subject(s)
Citrate (si)-Synthase/chemistry , HSP90 Heat-Shock Proteins/chemistry , Insulin/chemistry , Molecular Chaperones/chemistry , Adenosine Triphosphate/metabolism , Binding Sites , Cloning, Molecular , Fungal Proteins/chemistry , Peptides/chemistry , Protein Binding , Protein Denaturation , Protein Folding , Saccharomyces cerevisiae , Substrate Specificity
11.
J Biol Chem ; 272(30): 18608-13, 1997 Jul 25.
Article in English | MEDLINE | ID: mdl-9228028

ABSTRACT

Hsp90 is one of the most abundant proteins in the cytosol of eukaryotic cells. Under physiological conditions Hsp90 has been shown to play a major role in several specific signaling pathways, including maturation of various kinases and maintenance of steroid receptors in an activable state. It is well established that the level of Hsp90 increases severalfold under stress conditions, and it has been shown that the chaperone function of Hsp90 is ATP-independent. Although yeast Hsp90 does not bind ATP, as determined by a number of methods monitoring tight binding, ATP-dependent functions of Hsp90 in the presence of co-factors and elevated temperatures are still under discussion. Here, we have reinvestigated ATP-binding properties and ATPase activity of human Hsp90 under various conditions. We show that human Hsp90 does not bind ATP tightly and does not exhibit detectable ATPase activity. However, using electron spin resonance spectroscopy, weak binding of spin-labeled ATP analogues with half-maximal binding at 400 microM ATP was detected. The functional significance of this weak interaction remains enigmatic.


Subject(s)
Adenosine Triphosphate/metabolism , HSP90 Heat-Shock Proteins/metabolism , Heat-Shock Proteins , Adenosine Triphosphatases/metabolism , Animals , Carrier Proteins/metabolism , Cell Line , Electron Spin Resonance Spectroscopy , Endoplasmic Reticulum Chaperone BiP , HSC70 Heat-Shock Proteins , HSP70 Heat-Shock Proteins/metabolism , Humans , Kinetics , Mice , Molecular Chaperones/metabolism , Molybdenum/metabolism , Spectrometry, Fluorescence
12.
Science ; 274(5293): 1715-7, 1996 Dec 06.
Article in English | MEDLINE | ID: mdl-8939863

ABSTRACT

The Hsp90 heat shock protein of eukaryotic cells regulates the activity of proteins involved in signal transduction pathways and may direct intracellular protein folding in general. Hsp90 performs at least part of its function in a complex with a specific set of partner proteins that include members of the prolyl isomerase family. The properties of the major components of the Hsp90 complex were examined through the use of in vitro protein folding assays. Two of the components, FKBP52 and p23, functioned as mechanistically distinct molecular chaperones. These results suggest the existence of a super-chaperone complex in the cytosol of eukaryotic cells.


Subject(s)
Carrier Proteins/physiology , Citrate (si)-Synthase/chemistry , DNA-Binding Proteins/physiology , HSP90 Heat-Shock Proteins/physiology , Heat-Shock Proteins/physiology , Molecular Chaperones/physiology , Phosphoproteins/physiology , Protein Folding , Amino Acid Isomerases/antagonists & inhibitors , Amino Acid Isomerases/metabolism , Carrier Proteins/antagonists & inhibitors , Carrier Proteins/metabolism , Carrier Proteins/pharmacology , DNA-Binding Proteins/metabolism , DNA-Binding Proteins/pharmacology , Drosophila Proteins , Enzyme Inhibitors/pharmacology , HSP90 Heat-Shock Proteins/metabolism , Heat-Shock Proteins/metabolism , Heat-Shock Proteins/pharmacology , Intramolecular Oxidoreductases , Janus Kinases , Molecular Chaperones/metabolism , Molecular Chaperones/pharmacology , Peptidylprolyl Isomerase , Phosphoproteins/metabolism , Phosphoproteins/pharmacology , Polyenes/pharmacology , Prostaglandin-E Synthases , Protein Denaturation , Protein-Tyrosine Kinases/metabolism , Protein-Tyrosine Kinases/pharmacology , Recombinant Proteins/metabolism , Sirolimus , Tacrolimus Binding Proteins , Temperature , Transcription Factors
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