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1.
Anal Biochem ; 447: 64-73, 2014 Feb 15.
Article in English | MEDLINE | ID: mdl-24184358

ABSTRACT

We constructed a genetic fusion of a single domain antibody (sdAb) with the thermal stable maltose binding protein from the thermophile Pyrococcus furiosus (PfuMBP). Produced in the Escherichia coli cytoplasm with high yield, it proved to be a rugged and effective immunoreagent. The sdAb-A5 binds BclA, a Bacillus anthracis spore protein, with high affinity (K(D) ∼ 50 pM). MBPs, including the thermostable PfuMBP, have been demonstrated to be excellent folding chaperones, improving production of many recombinant proteins. A three-step purification of E. coli shake flask cultures of PfuMBP-sdAb gave a yield of approximately 100mg/L highly purified product. The PfuMBP remained stable up to 120 °C, whereas the sdAb-A5 portion unfolded at approximately 68 to 70 °C but could refold to regain activity. This fusion construct was stable to heating at 1mg/ml for 1h at 70 °C, retaining nearly 100% of its binding activity; nearly one-quarter (24%) activity remained after 1h at 90 °C. The PfuMBP-sdAb construct also provides a stable and effective method to coat gold nanoparticles. Most important, the construct was found to provide enhanced detection of B. anthracis Sterne strain (34F2) spores relative to the sdAb-A5 both as a capture reagent and as a detection reagent.


Subject(s)
Archaeal Proteins/genetics , Immunoassay/methods , Maltose-Binding Proteins/genetics , Membrane Glycoproteins/analysis , Recombinant Fusion Proteins/chemistry , Single-Domain Antibodies/chemistry , Temperature , Cytoplasm/genetics , Microspheres , Protein Stability , Pyrococcus furiosus/genetics , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Single-Domain Antibodies/biosynthesis , Single-Domain Antibodies/genetics , Single-Domain Antibodies/immunology , Spores, Bacterial , Transition Temperature
2.
Chem Biol ; 19(4): 449-55, 2012 Apr 20.
Article in English | MEDLINE | ID: mdl-22520751

ABSTRACT

Mutation of surface residues to charged amino acids increases resistance to aggregation and can enable reversible unfolding. We have developed a protocol using the Rosetta computational design package that "supercharges" proteins while considering the energetic implications of each mutation. Using a homology model, a single-chain variable fragment antibody was designed that has a markedly enhanced resistance to thermal inactivation and displays an unanticipated ≈30-fold improvement in affinity. Such supercharged antibodies should prove useful for assays in resource-limited settings and for developing reagents with improved shelf lives.


Subject(s)
Single-Chain Antibodies/chemistry , Hydrogen Bonding , Protein Engineering , Protein Folding , Protein Structure, Tertiary , Single-Chain Antibodies/metabolism , Software , Temperature
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