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1.
Int J Biochem Cell Biol ; 42(7): 1174-81, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20394834

ABSTRACT

Unlike mammalian cells, Drosophila melanogaster contains only a single member of the diphosphoinositol polyphosphate phosphohydrolase subfamily of the Nudix hydrolases, suggesting that functional specialisation has not occurred in this organism. In order to evaluate its function, Aps was cloned and characterized. It hydrolyses a range of (di)nucleoside polyphosphates, the most efficient being guanosine 5'-tetraphosphate (K(m)=11 microM, k(cat)=0.79 s(-1)). However, it shows a 5-fold preference for the hydrolysis of diphosphoinositol pentakisphosphate (PP-InsP(5), K(m)=0.07 microM, k(cat)=0.024 s(-1)). Assayed at 26 degrees C, Aps had an alkaline pH optimum and required a divalent ion: Mg(2+) (10-20 mM) or Mn(2+) (1 mM) were preferred for nucleotide hydrolysis and Mg(2+) (0.5-1 mM) or Co(2+) (1-100 microM) for PP-InsP(5) hydrolysis. GFP-fusions showed that Aps was predominantly cytoplasmic, with some nuclear localization. In the absence of dithiothreitol Aps was heat labile, rapidly losing activity even at 36 degrees C, while in the presence of dithiothreitol, Aps was heat stable, surviving for 5 min at 76 degrees C. Heat lability was restored by H(2)O(2) and mass spectrometric analysis suggested that this was due to reversible dimerisation involving two inter-molecular disulphides between Cys23 and Cys25. Aps expression was highest in embryos and declined throughout development. The ratio of PP-InsP(5) to inositol hexakisphosphate also decreased throughout development, with the highest level of PP-InsP(5) found in embryos. These data suggest that the redox state of Aps may play a role in controlling its activity by altering its stability, something that could be important for regulating PP-InsP(5) during development.


Subject(s)
Acid Anhydride Hydrolases/metabolism , Drosophila Proteins/metabolism , Drosophila melanogaster/enzymology , Pyrophosphatases/metabolism , Temperature , Acid Anhydride Hydrolases/chemistry , Acid Anhydride Hydrolases/genetics , Adenine Nucleotides/metabolism , Amino Acid Sequence , Animals , Cations, Divalent/pharmacology , Chromatography, High Pressure Liquid , Dithiothreitol/pharmacology , Drosophila Proteins/chemistry , Drosophila Proteins/genetics , Drosophila melanogaster/genetics , Enzyme Stability/drug effects , Gene Expression Regulation, Developmental/drug effects , Hydrogen-Ion Concentration/drug effects , Hydrolysis/drug effects , Inositol Phosphates/metabolism , Kinetics , Molecular Sequence Data , Oxidation-Reduction/drug effects , Protein Transport/drug effects , Pyrophosphatases/chemistry , Pyrophosphatases/genetics , Sequence Alignment , Subcellular Fractions/drug effects , Subcellular Fractions/enzymology , Substrate Specificity/drug effects , Nudix Hydrolases
2.
Int J Biochem Cell Biol ; 39(5): 943-54, 2007.
Article in English | MEDLINE | ID: mdl-17344088

ABSTRACT

The intracellular functions of diadenosine polyphosphates are still poorly defined. To understand these better, we have expressed and characterized a heat stable, 16.6kDa Nudix hydrolase (Apf) that specifically metabolizes these nucleotides from a Drosophila melanogaster cDNA. Apf always produces an NTP product, with substrate preference depending on pH and divalent ion (Zn(2+) or Mg(2+)). For example, diadenosine tetraphosphate is hydrolysed to ATP and AMP with K(m), k(cat) and k(cat)/K(m) values 9microM, 43s(-1) and 4.8microM(-1)s(-1) (pH 6.5, 0.1mMZn(2+)) and 12microM, 13s(-1) and 1.1microM(-1)s(-1) (pH 7.5, 20mMMg(2+)), respectively. However, diadenosine hexaphosphate is efficiently hydrolysed to ATP only at pH 7.5 with 20mMMg(2+) (K(m), k(cat) and k(cat)/K(m) values of 15microM 4.0s(-1), and 0.27microM(-1)s(-1)). Fluoride potently inhibits diadenosine tetraphosphate hydrolysis in the presence of Mg(2+) (IC(50)=20microM), whereas it is ineffective in the presence of Zn(2+), supporting the view that inhibition involves a specific, MgF(3)(-)-containing transition state analogue complex. Patterns of Apf expression in Drosophila tissues show Apf mRNA levels to be highest in embryos and adult females. Subcellular localization with Apf-EGFP fusion constructs reveals Apf to be predominantly nuclear, having an apparent preferential association with euchromatin and facultative heterochromatin. This supports a nuclear function for diadenosine tetraphosphate. Our results show Apf to be a fairly typical member of the bis (5'-nucleosyl)-tetraphosphatase subfamily of Nudix hydrolases with features that distinguish it from a previously reported bis (5'-nucleosyl)-tetraphosphatase hydrolase activity from Drosophila embryos.


Subject(s)
Drosophila Proteins/metabolism , Drosophila melanogaster/enzymology , Pyrophosphatases/metabolism , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Animals , Base Sequence , Cell Nucleus/metabolism , Dinucleoside Phosphates/metabolism , Drosophila Proteins/genetics , Drosophila melanogaster/embryology , Drosophila melanogaster/genetics , Enzyme Activation/drug effects , Female , Gene Expression Regulation, Developmental , Gene Expression Regulation, Enzymologic , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Hydrogen-Ion Concentration , Hydrolysis/drug effects , Kinetics , Magnesium/pharmacology , Microscopy, Fluorescence , Molecular Sequence Data , Pyrophosphatases/genetics , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Amino Acid , Temperature , Zinc/pharmacology , Nudix Hydrolases
3.
Mol Cell Biol ; 27(3): 963-74, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17101769

ABSTRACT

The Drosophila gypsy insulator contains binding sites for the Suppressor of Hairy-wing [Su(Hw)] protein. Enhancer and silencer blocking require Su(Hw) recruitment of Mod(mdg4)-67.2, a BTB/POZ domain protein that interacts with Su(Hw) through a carboxyl-terminal acidic domain. Here we conducted mutational analyses of the Mod(mdg4)-67.2 BTB domain. We demonstrate that this domain is essential for insulator function, in part through direction of protein dimerization. Our studies revealed the presence of a second domain (DD) that contributes to Mod(mdg4)-67.2 dimerization when the function of the BTB domain is compromised. Additionally, we demonstrate that mutations in amino acids of the charged pocket in the BTB domain that retain dimerization of the mutated protein cause a loss of insulator function. In these cases, the mutant proteins failed to localize to chromosomes, suggesting a role for the BTB domain in chromosome association. Interestingly, replacement of the Mod(mdg4)-67.2 BTB domain with the GAF BTB domain produced a nonfunctional protein. Taken together, these data suggest that the Mod(mdg4)-67.2 BTB domain confers novel activities to gypsy insulator function.


Subject(s)
Drosophila Proteins/metabolism , Drosophila melanogaster/genetics , Drosophila melanogaster/metabolism , Insulator Elements/genetics , Transcription Factors/metabolism , Alleles , Amino Acid Sequence , Animals , Chromosomes/metabolism , DNA Mutational Analysis , Dimerization , Diploidy , Drosophila Proteins/chemistry , Drosophila Proteins/genetics , Larva/cytology , Microtubule-Associated Proteins/metabolism , Molecular Sequence Data , Mutant Proteins/metabolism , Nuclear Proteins/metabolism , Phenotype , Protein Binding , Protein Structure, Tertiary , Protein Transport , Transcription Factors/chemistry , Transcription Factors/genetics , Transcription, Genetic , Wings, Animal/cytology , Wings, Animal/pathology
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