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1.
Food Microbiol ; 114: 104306, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37290880

ABSTRACT

Chicken meat is the most popularly consumed meat worldwide, with free-range and ethically produced meat a growing market among consumers. However, poultry is frequently contaminated with spoilage microbes and zoonotic pathogens which impact the shelf-life and safety of the raw product, constituting a health risk to consumers. The free-range broiler microbiota is subject to various influences during rearing such as direct exposure to the external environment and wildlife which are not experienced during conventional rearing practices. Using culture-based microbiology approaches, this study aimed to determine whether there is a detectable difference in the microbiota from conventional and free-range broilers from selected Irish processing plants. This was done through analysis of the microbiological status of bone-in chicken thighs over the duration of the meat shelf-life. It was found that the shelf-life of these products was 10 days from arrival in the laboratory, with no statistically significant difference (P > 0.05) evident between free-range and conventionally raised chicken meat. A significant difference, however, was established in the presence of pathogenesis-associated genera in different meat processors. These results reinforce past findings which indicate that the processing environment and storage during shelf-life are key determinants of the microflora of chicken products reaching the consumer.


Subject(s)
Chickens , Microbiota , Animals , Chickens/microbiology , Food Microbiology , Food Packaging/methods , Meat/microbiology
2.
Int J Food Microbiol ; 368: 109612, 2022 May 02.
Article in English | MEDLINE | ID: mdl-35278797

ABSTRACT

The control of bacterial contaminants on chicken meat is a key area of interest in the broiler industry. Microbes that pose a significant food safety risk on chicken include Campylobacter spp., Salmonella enterica, Listeria monocytogenes and Escherichia coli. In addition, microbes including Pseudomonas spp., Brochothrix thermosphacta and Lactic Acid Bacteria must be controlled to ensure product quality and maintain shelf-life. Poultry meat processing challenges including cold and chemical exposure are employed to control the microbiota of the end-product, as well as to maintain environment hygiene. Exposure to these stresses can also induce adaptive shifts in the transcriptome and proteome of foodborne bacteria. This review will explore the complex interactions at play in the poultry processing environment and explain how bacteria exposed to such stresses behave in this environmental niche through the production of heat and cold-shock proteins, the expression of efflux pumps, sporulation, and the formation of mono- and mixed-species biofilms within the production environment.


Subject(s)
Food Microbiology , Listeria monocytogenes , Animals , Chickens , Food Safety , Meat/microbiology , Poultry
3.
Food Microbiol ; 99: 103823, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34119108

ABSTRACT

Chickens play host to a diverse community of microorganisms which constitute the microflora of the live bird. Factors such as diet, genetics and immune system activity affect this complex population within the bird, while external influences including weather and exposure to other animals alter the development of the microbiome. Bacteria from these settings including Campylobacter and Salmonella play an important role in the quality and safety of end-products from these birds. Further steps, including washing and chilling, within the production cycle aim to control the proliferation of these microbes as well as those which cause product spoilage. These steps impose specific selective pressures upon the microflora of the meat product. Within the next decade, it is forecast that poultry meat, particularly chicken will become the most consumed meat globally. However, as poultry meat is a frequently cited reservoir of zoonotic disease, understanding the development of its microflora is key to controlling the proliferation of important spoilage and pathogenic bacterial groups present on the bird. Whilst several excellent reviews exist detailing the microbiome of poultry during primary production, others focus on fate of important poultry pathogens such as Campylobacter and Salmonella spp. At farm and retail level, and yet others describe the evolution of spoilage microbes during spoilage. This review seeks to provide the poultry industry and research scientists unfamiliar with food technology process with a holistic overview of the key changes to the microflora of broiler chickens at each stage of the production and retail cycle.


Subject(s)
Bacteria/isolation & purification , Chickens/microbiology , Microbiota , Animals , Bacteria/classification , Bacteria/genetics , Bacteria/growth & development , Chickens/growth & development , Farms , Food Handling , Food Microbiology , Meat/microbiology
4.
Lett Appl Microbiol ; 72(1): 36-40, 2021 Jan.
Article in English | MEDLINE | ID: mdl-32964486

ABSTRACT

Campylobacter spp. is the leading cause of bacterial gastroenteritis worldwide and poultry are the primary reservoir. The aim of this study was to investigate the survival and/or growth of Campylobacter jejuni NCTC 11168 in broiler digestate prepared from commercial starter, grower and finisher feed formulations. Bolton broth and digestates were prepared, inoculated with C. jejuni NCTC 11168 (approximately 3 log10 CFU per ml) and incubated under microaerobic conditions at 42°C for 24 h. Samples were taken at t = 0 (immediately after inoculation) and every 3 h thereafter, serially diluted and plated onto mCCDA. Campylobacter jejuni grew as expected in Bolton broth (control) reaching the early stationary phase after approximately 15 h. In contrast, although bacterial concentrations were maintained for at least 9 h, none of the feed digestates supported the growth of C. jejuni, which were not detected after 15 h. It is suggested that the nutrients available in the feed digestates are not enough to support C. jejuni growth and that additional factors may be at play in the avian gastrointestinal tract.


Subject(s)
Animal Feed/microbiology , Campylobacter Infections/microbiology , Campylobacter jejuni/growth & development , Chickens/microbiology , Disease Reservoirs/microbiology , Gastroenteritis/microbiology , Poultry Diseases/microbiology , Animals , Campylobacter Infections/epidemiology , Gastroenteritis/epidemiology , Humans
5.
Ir Med J ; 113(3): 42, 2020 03 13.
Article in English | MEDLINE | ID: mdl-32815702

ABSTRACT

Presentation A 40-year-old Irish female presented with a new diagnosis of HIV, advanced immunosuppression and severe respiratory failure. Diagnosis Patient was subsequently diagnosed with Pneumocystis jiroveci Pneumonia (PJP). Treatment The patient was treated for HIV and PJP and required mechanical ventilation. She continued to deteriorate and veno-venous Extracorporeal Membrane Oxygenation (V-V ECMO) was deployed in her management after 18 days of mechanical ventilation. Conclusion HIV presenting with extensive pneumonia secondary to PJP and advanced immunosuppression is still a treatable condition. All available respiratory support including ECMO should be considered for patients even if they have been on mechanical ventilation for more than 7 days.


Subject(s)
Extracorporeal Membrane Oxygenation/methods , HIV Infections/complications , HIV Infections/therapy , Pneumonia, Pneumocystis/complications , Pneumonia, Pneumocystis/therapy , Respiratory Insufficiency/therapy , Adult , Female , HIV Infections/immunology , Humans , Immune Tolerance , Pneumonia, Pneumocystis/diagnostic imaging , Pneumonia, Pneumocystis/immunology , Respiration, Artificial , Respiratory Insufficiency/diagnostic imaging , Respiratory Insufficiency/etiology , Severity of Illness Index , Time Factors , Tomography, X-Ray Computed , Treatment Outcome
6.
Lett Appl Microbiol ; 71(6): 660-666, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32608530

ABSTRACT

Blown pack spoilage (BPS) of vacuum packaged beef is caused by psychrotolerant and psychrophilic Clostridium species, primarily Clostridium estertheticum and Clostridium gasigenes. The aim of this study was to investigate the environmental niches and impact of season on these BPS Clostridium spp. on Irish beef farms. On each of five different beef farms, faecal (10), soil (5), silage (5), air (5), bedding straw (5), drinking water (5) and puddle/ditch water (5) samples were collected during Spring, Summer, Autumn and Winter and tested for C. estertheticum and C. gasigenes using culture (direct plating and enrichment) and molecular (conventional PCR and quantitative PCR (qPCR)) based techniques. C. estertheticum and C. gasigenes were detected in all sample types, with qPCR detection rates ranging from 4% to 50% and at concentrations of up to 1·5 log10 CFU per g and 3·5 log10 CFU per g, respectively. The impact of season was not clear as the results were mixed depending on the detection method used. It was concluded that BPS-causing C. estertheticum and C. gasigenes are widely distributed in the beef farm environment.


Subject(s)
Clostridium/isolation & purification , Food Contamination/analysis , Meat/microbiology , Animals , Cattle , Clostridium/classification , Clostridium/genetics , Ecosystem , Environmental Microbiology , Farms , Feces/microbiology , Food Packaging , Fresh Water/microbiology , Ireland , Real-Time Polymerase Chain Reaction , Seasons , Soil Microbiology
7.
Br Poult Sci ; 61(5): 550-556, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32329627

ABSTRACT

1. Campylobacteriosis is the leading cause of human bacterial gastroenteritis. Broilers are considered the most important source of human Campylobacter infection. In the 2008 European baseline survey Ireland had a 98% prevalence of campylobacter-contaminated broiler carcases. 2. Randomly-selected Campylobacter isolates (296 C. jejuni, 54 C. coli) recovered in 2017 and 2018, from Irish broiler neck skin and caeca were tested for their resistance to tetracycline, erythromycin, gentamicin, ciprofloxacin, nalidixic acid and streptomycin. 3. Overall, 45% of the Campylobacter spp. isolates tested were resistant to at least one antimicrobial. Tetracycline resistance (38%) was most prevalent in C. jejuni, followed by ciprofloxacin and nalidixic acid resistance (29%). In C. coli, resistance to ciprofloxacin and nalidixic acid (26%) was most prevalent followed by resistance to tetracycline (13%). Gentamicin resistance was undetected and resistance to streptomycin was low for C. jejuni (1%) and C. coli (4%). All C. jejuni isolates examined were erythromycin-sensitive, while 9% of C. coli isolates were erythromycin-resistant. Three multidrug-resistant C. coli isolates were recovered. 4. While antibiotic resistance rates were somewhat similar to figures reported nationally over the past 20 years, the prevalence of tetracycline resistance in C. jejuni has increased. The persistence of substantial ciprofloxacin resistance in the Irish broiler population was noteworthy, despite fluoroquinolones having been banned for growth promotion in Europe since 2006.


Subject(s)
Campylobacter Infections , Campylobacter coli , Campylobacter jejuni , Campylobacter , Animals , Anti-Bacterial Agents/pharmacology , Campylobacter Infections/drug therapy , Campylobacter Infections/epidemiology , Campylobacter Infections/veterinary , Chickens , Drug Resistance, Bacterial , Humans , Ireland/epidemiology , Microbial Sensitivity Tests/veterinary
8.
J Food Prot ; 81(12): 2003-2006, 2018 12.
Article in English | MEDLINE | ID: mdl-30476441

ABSTRACT

Listeria monocytogenes is an important bacterial pathogen in seafood products, but limited information is currently available on the thermal resistance of relevant isolates in seafood. Thermal inactivation studies were undertaken (i) to provide much needed thermal inactivation data for L. monocytogenes in crab meat and (ii) to investigate whether tryptone soya broth (TSB) is representative of crab meat in thermal inactivation studies involving L. monocytogenes. D-values were obtained for a cocktail of two crab isolates (serotypes 1/2a and 4b) at 50, 55, and 60°C. In crab meat, D-values were 174.4, 28.2, and 1.6 min, respectively. Similar D-values of 176.4, 28.8, and 1.4 min were obtained in TSB. The corresponding z-values were 4.9°C (crab meat) and 4.8°C (TSB), respectively. The conclusions were that (i) current pasteurization conditions (e.g., 70°C for 2 min) would achieve complete destruction of any L. monocytogenes present in crab meat and (ii) TSB could be used as a model matrix for assessing the thermal inactivation of L. monocytogenes in crab meat.


Subject(s)
Brachyura , Food Handling/methods , Food Microbiology , Listeria monocytogenes , Seafood/microbiology , Animals , Brachyura/microbiology , Food Contamination/analysis , Food Contamination/prevention & control , Hot Temperature , Listeria monocytogenes/growth & development
9.
Ultrason Sonochem ; 40(Pt A): 497-504, 2018 Jan.
Article in English | MEDLINE | ID: mdl-28946451

ABSTRACT

This study assesses the potential of incorporating ultrasound as a processing aid in the production of whole cooked brown crab (Cancer pagurus). The FDA recommended heat treatment to reduce Listeria monocytogenes by 6 log10 cycles in this product is a F707.5 of 2min. An equivalent F value was applied at 75°C in presence and absence of ultrasound in water alone or in water with 5% w/v NaCl added. Heat penetration, turbidity and conductivity of the cook water and also salt and moisture content of the crab meat (white and brown) were determined. Ultrasound assisted cooking allowed a reduction of the cooking time by up to 15% while still maintaining an F707.5 of 2min. Ultrasound also enhanced the rate and total amount of compounds released from the crab, which suggests that crabs cooked in the presence of ultrasound would be expected to be cleaner. Ultrasound also proved to be effective in reducing the salt content but hardly affected the final moisture content of the crab meat.


Subject(s)
Brachyura , Food Handling/methods , Ultrasonic Waves , Animals , Food Quality , Water/analysis
10.
J Appl Microbiol ; 122(5): 1197-1206, 2017 May.
Article in English | MEDLINE | ID: mdl-28245080

ABSTRACT

AIMS: Silage is grass, preserved by fermentation and used as winter feed for cattle. The impact of a range of current grass silage preparation practices on the survival of Escherichia coli C600φ3538(Δvtx2 ::cat) and on the induction, release and infectivity of free phage were investigated. METHODS AND RESULTS: Wilted and fresh grass samples, from plots with and without slurry application, were ensiled with or without formic acid. Each treatment combination was inoculated with approximately 6 log10 CFU per g E. coli C600φ3538(Δvtx2 ::cat) (donor strain) and E. coli C600::kanamycinR (recipient strain) in test-tube model silos and incubated in the dark at 15°C. The physico-chemical (pH, ammonia, ethanol, lactic acid and volatile fatty acids) and microbiological (total viable counts, TVC, total Enterobacteriaceae counts, TEC, E. coli counts, ECC and lactic acid bacteria, LAB) properties of each fermentation were monitored throughout the experiment as were the concentrations of E. coli C600φ3538(Δvtx2 ::cat), E. coli C600::kanamycinR , free phage and transductants, using culture and PCR-based methods. Over the course of the experiment the pH of the grass samples typically decreased by 2 pH units. TVC, TEC and ECC decreased by up to 2·3, 6·4 and 6·2 log10 CFU per g, respectively, while the LAB counts remained relatively stable at 5·2-7·1 log10 CFU per g. Both donor and recipient strains decreased by approximately 5 log10 CFU per g. Free phages were detected in all treatments and transductants were detected and confirmed by PCR in the silo containing wilted grass, pretreated with slurry and ensiled without formic acid. CONCLUSIONS: Verocytotoxigenic E. coli may survive the ensiling process and the conditions encountered are sufficient to induce vtx2 bacteriophage leading to low levels of phage-mediated vtx2 gene transfer. SIGNIFICANCE AND IMPACT OF THE STUDY: These studies suggest that the ensiling of grass may create an environment which facilitates the emergence of new verocytotoxigenic E. coli.


Subject(s)
Escherichia coli/isolation & purification , Poaceae/microbiology , Poaceae/virology , Prophages/isolation & purification , Silage/microbiology , Silage/virology , Animal Feed/analysis , Animal Feed/microbiology , Animal Feed/virology , Animals , Cattle , Escherichia coli/genetics , Escherichia coli/growth & development , Escherichia coli/metabolism , Fatty Acids, Volatile/metabolism , Fermentation , Food Handling , Formates/metabolism , Hydrogen-Ion Concentration , Lactic Acid/metabolism , Prophages/genetics , Prophages/growth & development , Prophages/metabolism , Silage/analysis
11.
Food Microbiol ; 64: 1-6, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28213012

ABSTRACT

The objectives of this study were to evaluate current cleaning practices in broiler houses by testing a range of sites after cleaning and disinfection and to test the efficacy of the most commonly used methods in a commercial broiler house after flock harvesting. Cleaning procedures on 20 broiler houses (10 separate farms) were examined by testing a range of sampling points (feeders, drinkers, walls, etc.) for total viable count (TVC), total Enterobacteriaceae count (TEC) and Campylobacter spp. after cleaning and disinfection, using culture based methods. In a second experiment, the six most commonly used commercially available disinfectants and/or detergent products were evaluated. The results of the first study demonstrated that critical areas in 12 of the 20 broiler houses were not effectively cleaned and disinfected between flocks as the tarmac apron, ante-room, house door, feeders, drinkers, walls, columns, barriers and/or bird weighs were Campylobacter positive. Thermal fogging with the combination of potassium peroxymonosulfate, sulfamic acid and sodium chloride (5%, v/v) or the glutaraldehyde and quaternary ammonium complex (0.3%, v/v) were the most effective treatments while other disinfectant treatments were considerably less effective. It was therefore concluded that farmers should review their broiler house cleaning and disinfection procedures if Campylobacter cross-contamination between successive flocks is to be prevented.


Subject(s)
Campylobacter Infections/veterinary , Disinfection/methods , Farms , Hygiene , Poultry Diseases/prevention & control , Poultry Diseases/transmission , Animal Husbandry/methods , Animals , Campylobacter/drug effects , Campylobacter/isolation & purification , Campylobacter/physiology , Campylobacter Infections/microbiology , Campylobacter Infections/prevention & control , Campylobacter Infections/transmission , Chickens , Colony Count, Microbial , Drinking Water/microbiology , Food Microbiology , Hygiene/standards , Peroxides/pharmacology , Poultry Diseases/microbiology , Quaternary Ammonium Compounds/pharmacology , Seasons , Sodium Chloride/pharmacology , Sulfonic Acids/pharmacology
12.
Lett Appl Microbiol ; 64(2): 177-181, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27981595

ABSTRACT

The aim of this study was to investigate if rapid slurry chilling would retard or prevent blown pack spoilage (BPS) of vacuum-packaged beef primals. Beef primals were inoculated with Clostridium estertheticum subspp. estertheticum (DSMZ 8809), C. estertheticum subspp. laramenise (DSMZ 14864) and C. gasigenes (DSMZ 12272), and vacuum-packaged with and without heat shrinkage (90°C for 3 s). These packs were then subjected to immediate chilling in an ice slurry or using conventional blast chilling systems and stored at 2°C for up to 100 days. The onset and progress of BPS was monitored using the following scale; 0-no gas bubbles in drip; 1-gas bubbles in drip; 2-loss of vacuum; 3-'blown'; 4-presence of sufficient gas inside the packs to produce pack distension and 5-tightly stretched, 'overblown' packs/packs leaking. Rapid slurry chilling (as compared to conventional chilling) did not significantly affect (P > 0.05) the time to the onset or progress of BPS. It was therefore concluded that rapid chilling of vacuum-packaged beef primals, using an ice slurry system, may not be used as a control intervention to prevent or retard blown pack spoilage. SIGNIFICANCE AND IMPACT OF THE STUDY: This study adds to our growing understanding of blown pack spoilage of vacuum-packaged beef primals and suggests that rapid chilling of vacuum-packaged beef primals is not a control option for the beef industry. The results suggest that neither eliminating the heat shrinkage step nor rapid chilling of vacuum-packaged beef retard the time to blown pack spoilage.


Subject(s)
Clostridium/growth & development , Food Packaging/methods , Food Preservation/methods , Red Meat/microbiology , Refrigeration/methods , Animals , Cattle , Cold Temperature , Vacuum
13.
J Appl Microbiol ; 121(4): 1144-51, 2016 Oct.
Article in English | MEDLINE | ID: mdl-27371115

ABSTRACT

AIMS: Cattle are the main reservoir of verocytotoxigenic Escherichia coli (VTEC), food-borne pathogens that express verocytotoxins (vtx) encoded by temperate bacteriophage. Bovine faeces and unturned manure heaps can support the survival of VTEC and may propagate and transmit VTEC. This study investigated the survival of a vtx2 bacteriophage, φ24B ::Kan, in bovine faeces and slurry. The survival of an anti-Escherichia coli O157:H7 lytic bacteriophage, e11/2, was examined in the same matrices, as a possible bio-control option for VTEC. METHODS AND RESULTS: Samples were inoculated with φ24B ::Kan and/or e11/2 bacteriophage at a concentration of 7-8 log10  PFU g(-1)  (faeces) or ml(-1) (slurry), stored at 4 and 14°C and examined every 2 days for 36 days. The ability of φ24B ::Kan to transduce E. coli cells was examined. Moreover, E. coli concentrations in the faeces and slurry were monitored throughout the experiment as were the pH and aw (faeces only). Both bacteriophages survived well in faeces and slurry. In addition, φ24B ::Kan was able to form lysogens. CONCLUSIONS: φ24B ::Kan and e11/2 phage can survive and remain infective in bovine faeces and slurry for at least 30 days under representative Irish temperatures. SIGNIFICANCE AND IMPACT OF THE STUDY: Bovine faeces and slurry may act as a reservoir for vtx bacteriophages. The survival of the anti-O157 phage suggests it may be a suitable bio-control option in these matrices.


Subject(s)
Bacteriophages/growth & development , Bacteriophages/isolation & purification , Feces/virology , Manure/virology , Animals , Bacteriophages/classification , Bacteriophages/genetics , Cattle , Escherichia coli O157/physiology , Escherichia coli O157/virology , Feces/microbiology , Manure/microbiology , Temperature
14.
Vet Rec ; 179(2): 47, 2016 Jul 09.
Article in English | MEDLINE | ID: mdl-27259758

ABSTRACT

The objective of this cohort study was to assess the relationship between perinatal calf management practices relevant to the control of paratuberculosis and passive transfer of immunoglobulin in calves born in an endemically infected Irish dairy herd. Data from 176 calves were used to assess the effect of time spent in the calving area, individual versus non-designated calving and colostrum pasteurisation on serum total protein, zinc sulphate turbidity, globulin and γ-glutamyltransferase. In addition, the effects of colostrum quality, volume of colostrum fed, method of colostrum administration and calving season on passive transfer were quantified. Serum samples were collected as part of routine herd health monitoring from calves aged between one and seven days. Multivariate linear and logistic regression models were used to assess the effect of each variable on the test result and failure of passive transfer as determined using a cut-off point for each diagnostic test. Colostrum pasteurisation and calving area were not significantly associated with passive transfer, whereas increased time spent in the calving pen was consistently associated with a detrimental effect. In addition, a strong seasonal effect was apparent, which appeared to be unrelated to colostrum quality and calf management. The authors are unaware of published studies documenting such a significant seasonal effect on passive transfer.


Subject(s)
Animals, Newborn/immunology , Cattle Diseases/prevention & control , Cattle/immunology , Dairying/methods , Endemic Diseases/veterinary , Immunity, Maternally-Acquired , Paratuberculosis/prevention & control , Animals , Blood Proteins/analysis , Cattle/blood , Cattle Diseases/epidemiology , Cohort Studies , Colostrum/immunology , Female , Ireland/epidemiology , Logistic Models , Male , Paratuberculosis/epidemiology , Peripartum Period , Pregnancy , Serum Globulins/analysis , Zinc Sulfate/analysis , gamma-Glutamyltransferase/blood
15.
Zoonoses Public Health ; 63(8): 632-640, 2016 12.
Article in English | MEDLINE | ID: mdl-27334728

ABSTRACT

Verocytotoxigenic (vtx) Escherichia coli (VTEC) are zoonotic foodborne pathogens with the vtx operon encoded by lambdoid bacteriophage (phage). Despite much research on the host bacteria, similar data on the persistence of verocytotoxin converting phage and the ecological niches where transduction occurs are lacking and novel VTEC of important public health significance, have and continue to emerge. This study investigated the survival of a temperate vtx bacteriophage (24B ::kanamycinR ) in water (raw farm, pasteurized farm, laboratory tap and autoclaved purified water) and soil (sandy loam and loam soil). It also examined the persistence of an anti-VTEC lytic phage (e11/2) in the same matrices as this may be one option for controlling the emergence of novel VTEC, especially in farm ecological niches where other control options, such as chemical, heat or high pressure treatments, are not feasible. Samples inoculated with 24B ::kanamycinR and e11/2 bacteriophage (8 log10 pfu/ml or pfu/g) separately were incubated at 4°C and 14°C, representative Irish Winter and Summer temperatures, respectively, and tested every 2 days for 40 days. The transduction of 24B ::kanamycinR was also continuously assessed. Both phages survived with reductions observed, regardless of matrix or storage temperature. Moreover, 24B ::kanamycinR was able to transduce its host E. coli strain. It was therefore concluded that aquatic and soil environments on farms may serve as a vtx phage reservoir and transduction point but anti-VTEC phage is a possible biocontrol option.


Subject(s)
Coliphages/physiology , Shiga-Toxigenic Escherichia coli/virology , Soil Microbiology , Water Microbiology , Temperature
17.
J Appl Microbiol ; 120(4): 1108-18, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26788933

ABSTRACT

AIM: The aim of this study was to apply the most sensitive molecular techniques in combination with culture-based methods to characterize broiler farms in terms of the timeline ('appearance' and 'pattern') of Campylobacter contamination prior to and post detection in the birds. METHODS AND RESULTS: Faecal and environmental samples were collected from three broiler farms (two flocks per farm). Real-time PCR was used to test for the presence of Campylobacter. Culture-based methods (enrichment and direct plating) were also applied and isolates were subject to a range of confirmatory tests before speciation (multiplex PCR). All flocks were colonized by Campylobacter before first thin and a similar pattern of Campylobacter contamination was observed; (day -1) a range of external and internal samples real-time PCR positive but culture negative; (day 0) chicks negative; (6-9 days pre-detection in the birds) internal samples (feeders, drinkers, barrier and/or bird weigh) culture positive and (post broiler infection) increasing concentrations of Campylobacter in internal samples but also on the tarmac apron and anteroom. CONCLUSION: It was concluded that; (i) vertical transmission did not occur; (ii) the environment was a potential source of Campylobacter; (iii) testing areas frequented by all birds (e.g. feeders and drinkers), may offer an opportunity for early Campylobacter detection and (iv) once the broilers are infected with Campylobacter, these bacteria are spread from the birds, through the anteroom to the areas surrounding the broiler house, highlighting the need for improved biosecurity. SIGNIFICANCE AND IMPACT OF THE STUDY: This study has established the pattern of Campylobacter contamination on broiler farms, identified an early detection opportunity, highlighted the need to better understand the role of viable but nonculturable Campylobacter in the ecology of Campylobacter on broiler farms and demonstrated the need for improved biosecurity to prevent the spread of Campylobacter from within the house to the surrounding environment.


Subject(s)
Campylobacter Infections/veterinary , Campylobacter/isolation & purification , Chickens/microbiology , Poultry Diseases/epidemiology , Animal Husbandry , Animals , Campylobacter/physiology , Campylobacter Infections/epidemiology , Disease Transmission, Infectious/veterinary , Farms , Housing, Animal , Infectious Disease Transmission, Vertical/veterinary , Poultry Diseases/microbiology
18.
J Appl Microbiol ; 117(3): 876-81, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24946012

ABSTRACT

AIMS: The objectives of this study were the following: (i) to investigate if Campylobacter negative flocks at first thinning remain negative at second thinning; (ii) to determine if the caecal counts in birds infected during first thinning remain lower than in birds that were positive at first thinning; and (iii) to determine if reducing the time between first and second thinning to a maximum of 4 days would reduce both the incidence and prevalence of broiler caecal contamination. METHODS AND RESULTS: Twenty-two flocks were tested at first and second thinning using ISO methodologies. Of the 14 that had a 4-day duration between first and second thinning, nine flocks were Campylobacter negative at first thinning. By second thinning, all 14 flocks were positive and Campylobacter counts ranged from 5·5 to 6·6 log(10) CFU g(-1) regardless of the status at first thinning. The other eight flocks were all Campylobacter positive at first thinning with counts ranging from 0·8 to 6·1 log(10) CFU g(-1) which increased to 5·1 to 6·9 log(10) CFU g(-1) by second thinning (3-10 days). PCR speciation and MLST genotyping suggested the majority of isolates were Camp. jejuni belonging to STs 257, 814, 6763 and 6764. CONCLUSIONS: It was concluded that; thinning introduces Campylobacter into broiler flocks; caecal counts in birds at second thinning are similar, regardless of flock status at first thinning and reducing the time between first and second thinning to a maximum of 4 days is not an effective control strategy. SIGNIFICANCE AND IMPACT OF THE STUDY: This study informs Campylobacter control strategy at primary production, suggesting all post-first thinning broilers should be treated as 'high risk' regardless of Campylobacter status at first thinning or duration between first and second thinning.


Subject(s)
Campylobacter Infections/veterinary , Campylobacter/isolation & purification , Cecum/microbiology , Chickens/microbiology , Poultry Diseases/microbiology , Animals , Campylobacter/genetics , Campylobacter Infections/epidemiology , Campylobacter Infections/microbiology , Genotype , Incidence , Multilocus Sequence Typing , Poultry Diseases/epidemiology , Prevalence
19.
Oncogene ; 33(28): 3742-7, 2014 Jul 10.
Article in English | MEDLINE | ID: mdl-23955081

ABSTRACT

The epigenetic regulator BMI1 is upregulated progressively in a wide variety of human tumors including colorectal cancer. In this study, we assessed the requirement for Bmi1 in intestinal tumorigenesis using an autochthonous mouse model in which Apc was conditionally ablated in the intestinal epithelium. Germline mutation of Bmi1 significantly reduced both the number and size of small intestinal adenomas arising in this model, and it acted in a dose-dependent manner. Moreover, in contrast to wild-type controls, Bmi1(-/-) mice showed no increase in median tumor size, and a dramatic decrease in tumor number, between 3 and 4 months of age. Thus, Bmi1 is required for both progression and maintenance of small intestinal adenomas. Importantly, Bmi1 deficiency did not disrupt oncogenic events arising from Apc inactivation. Instead, the Arf tumor suppressor, a known target of Bmi1 epigenetic silencing, was upregulated in Bmi1 mutant tumors. This was accompanied by significant upregulation of p53, which was confirmed by sequencing to be wild-type, and also elevated apoptosis within the smallest Bmi1(-/-) adenomas. By crossing Arf into this cancer model, we showed that Arf is required for the induction of both p53 and apoptosis, and it is a key determinant of the ability of Bmi1 deficiency to suppress intestinal tumorigenesis. Finally, a conditional Bmi1 mutant strain was generated and used to determine the consequences of deleting Bmi1 specifically within the intestinal epithelium. Strikingly, intestinal-specific Bmi1 deletion suppressed small intestinal adenomas in a manner that was indistinguishable from germline Bmi1 deletion. Thus, we conclude that Bmi1 deficiency impairs the progression and maintenance of small intestinal tumors in a cell autonomous and highly Arf-dependent manner.


Subject(s)
Carcinogenesis , Intestinal Neoplasms/metabolism , Intestinal Neoplasms/pathology , Polycomb Repressive Complex 1/metabolism , Proto-Oncogene Proteins/metabolism , Animals , Apoptosis , Cyclin-Dependent Kinase Inhibitor p16/metabolism , Disease Models, Animal , Female , Intestinal Mucosa/metabolism , Male , Mice , Polycomb Repressive Complex 1/deficiency , Proto-Oncogene Proteins/deficiency
20.
Br Poult Sci ; 54(3): 319-24, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23796116

ABSTRACT

1. This study investigated the potential of a commercially available acidified water treatment (PWT) for reducing the number of Campylobacter in vitro and other bacteria in the gut of live broilers. 2. In vitro tests indicated that PWT was highly effective for reducing Campylobacter jejuni and Campylobacter coli at the recommended concentration in water, reducing populations by greater than 7 log10 CFU/ml after 24 h exposure. The decrease in the number of Salmonella serovar Enteritidis and Escherichia coli was not significant. 3. Addition of PWT to the broiler drinking water for the first 7 d, 2 d before and 2 d after each feed change and at feed withdrawal prior to slaughter or only after feed withdrawal had no effect on the number of Campylobacter in caecal samples on farm before thinning and depopulation compared to untreated controls. 4. Although PWT was effective for reducing Campylobacter in water, the results suggest that it does not reduce the number of Campylobacter in the caeca of broilers prior to slaughter under the conditions used in the study.


Subject(s)
Campylobacter/isolation & purification , Chickens/microbiology , Drinking Water/chemistry , Animals , Bacterial Load , Cecum/microbiology , Food Microbiology , Hydrogen-Ion Concentration
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