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1.
Opt Express ; 20(12): 12710-20, 2012 Jun 04.
Article in English | MEDLINE | ID: mdl-22714300

ABSTRACT

The internal state of organic photochromic spiropyran molecules adsorbed on optical microfibres is optically controlled and measured by state-dependent light absorption. Repeated switching between the states is achieved by exposure to the evanescent field of a few nanowatts of light guided in the microfibre. By adjusting the microfibre evanescent field strength the dynamic equilibrium state of the molecules is controlled. Time-resolved photoswitching dynamics are measured and modelled with a rate equation model. We also study how many times the photochromic system can be switched before undergoing significant photochemical degradation.

2.
Cytogenet Genome Res ; 114(3-4): 235-9, 2006.
Article in English | MEDLINE | ID: mdl-16954659

ABSTRACT

We report on a family in which a daughter is described with mental retardation, as well as malformations of the heart, and of the brain (Dandy-Walker variant). The patient's phenotype suggests a chromosomal rearrangement. However, her karyotype was unremarkable by conventional cytogenetic analysis. In order to detect chromosome rearrangements overseen by this method, the subtelomere regions of suspicious chromosomes were verified by fluorescence in situ hybridization (FISH). A rearranged derivative chromosome 6 was identified. Further examinations by FISH-microdissection (FISH-MD) revealed a maternal complex balanced translocation. The patient inherited the derivative chromosome 6 from her mother and therefore carries a partial monosomy 6q26-->qter and a partial trisomy 11q23.3-->qter.


Subject(s)
Allelic Imbalance , Chromosomes, Human, Pair 11 , Chromosomes, Human, Pair 6 , Translocation, Genetic , Chromosome Aberrations , Chromosome Mapping , Dissection/methods , Female , Humans , In Situ Hybridization, Fluorescence , Mothers , Telomere/genetics
3.
Prenat Diagn ; 21(8): 642-8, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11536263

ABSTRACT

We report on a fetus and a newborn, both with partial trisomy 7q21-->qter due to different familial translocations, t(7;21)(q21.2;p12) and t(4;7)(q35;q21.2). Postmortem examination of the 19-week-old female fetus disclosed dysmorphic features, cleft palate, anomalies of the great vessels, intestinal malrotation and uterus bicornis. The newborn girl revealed a pattern of minor anomalies, cleft palate, cerebellar hypoplasia, and anomalies of pancreas, gall bladder and appendix. The clinical findings in three other reported fetuses with partial trisomy 7q described so far are reviewed. A duplication 7q21-->qter, as found in the propositi, has only been described in 11 patients who all had a concurrent partial monosomy. Patient 1 is particularly interesting since she is, to our knowledge, the first reported case with pure trisomy 7q21/22-->qter. We reviewed the phenotype of the previously described patients, compared it with the propositae, and summarized the clinical features of pure trisomy 7q21/22-->qter.


Subject(s)
Chromosomes, Human, Pair 7 , Trisomy/diagnosis , Adolescent , Adult , Cytogenetic Analysis , Diagnosis, Differential , Female , Humans , In Situ Hybridization, Fluorescence , Infant, Newborn , Pregnancy , Prenatal Diagnosis , Trisomy/pathology
4.
Chromosome Res ; 9(5): 395-402, 2001.
Article in English | MEDLINE | ID: mdl-11448041

ABSTRACT

A technique disclosing most information about chromosome modifications is the technique of choice for the analysis of chromosome alterations. The newly developed method for microdissection of fluorescence-labeled chromosomes (FISH-MD) can improve upon this expectation in combination with 24-color spectral karyotyping (SKY). The highly efficient way to detect chromosome modifications by SKY and the detailed specification of aberrant chromosomes by FISH-MD prompted us to use both techniques in a combined approach called SKY-MD. First, an overview of chromosomal aberrations is obtained by spectral karyotyping and subsequently the derivative chromosomes recognized are characterized in a highly specific manner by microdissection and reverse painting. A small quantity of isolated material dissected directly from a 24-color metaphase is sufficient to obtain very detailed information about the chromosome regions and the breakpoints involved in the derivative chromosomes. Therefore, the combination of spectral karyotyping and microdissection in one procedure, and reverse painting can characterize chromosomal aberrations with a degree of specificity hitherto unknown from individual karyotyping experiments. In this article we compare the efficiency of both the SKY technique and that of classical microdissection with the efficiency obtained by SKY-MD.


Subject(s)
Chromosome Painting/methods , Chromosomes/ultrastructure , Karyotyping/methods , Chromosome Aberrations , Chromosome Banding , Chromosomes, Human, Pair 9/ultrastructure , Female , Humans , In Situ Hybridization , In Situ Hybridization, Fluorescence/methods , Male , Polymerase Chain Reaction
5.
Hum Mutat ; 17(5): 423-30, 2001 May.
Article in English | MEDLINE | ID: mdl-11317358

ABSTRACT

We describe a new procedure for the analysis of the methlyation status of imprinted genes based on methylation-specific PCR followed by denaturing high performance liquid chromatography (MSP/DHPLC). The method offers a rapid and very reliable alternative to conventional methods used for such purposes such as Southern blots and methylation specific PCR (allele-specific MSP). The efficient resolution of the differentially methylated alleles is demonstrated for two human imprinted genes, namely the SNRPN gene and the LIT1 gene (KCNQ1OT1). Abnormal imprinting of the two genes is associated with the Angelman/Prader-Willi syndromes and the Beckwith-Wiedemann syndrome, respectively. The MSP/DHPLC method is based on PCR amplification of gene segments which show parent-of-origin specific methylation. Genomic DNA is subjected to an in vitro bisulfite treatment prior to PCR amplifications using primers specific for modified DNA. Both alleles are theoretically amplified with equal efficiency and are represented by identically sized PCR products; they differ, however, at a number of positions within the amplified DNA segment. The DHPLC analysis allows a very efficient resolution of the two populations of PCR products. The high sensitivity and quantitative properties of the MSP/DHPLC method are illustrated based on its ability to reveal a low cell mosaicism in an infant with a maternal uniparental disomy 15 (i.e., Prader-Willi syndrome patient). The minor cell line (approximately 8% in blood) was not detectable with conventional molecular analysis. While the detection of low cell mosaicisms of structurally abnormal chromosomes usually relies on cytogenetic studies, the MSP/DHPLC method described here not only offers an alternative at the molecular level, but may also reveal mosaicisms concerning structurally intact chromosomes.


Subject(s)
Autoantigens/genetics , DNA Methylation , Genomic Imprinting/genetics , Mosaicism/genetics , Polymerase Chain Reaction/methods , Protein Serine-Threonine Kinases/genetics , Ribonucleoproteins, Small Nuclear , Adult , Alleles , Angelman Syndrome/genetics , Beckwith-Wiedemann Syndrome/genetics , Blotting, Southern , Caenorhabditis elegans Proteins , Child , Chromatography, High Pressure Liquid/methods , Female , Humans , Infant , Male , Membrane Proteins , Molecular Sequence Data , Nucleic Acid Denaturation , Prader-Willi Syndrome/genetics , Reproducibility of Results , Sensitivity and Specificity , Substrate Specificity , Temperature , Time Factors , snRNP Core Proteins
6.
Prenat Diagn ; 20(10): 847-50, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11038468

ABSTRACT

The Wolf-Hirschhorn syndrome (WHS) is characterized by severe pre- and postnatal growth retardation, specific pattern of dysmorphisms, and severe developmental delay. These clinical findings are the result of a deletion within the short arm of chromosome 4. Most cases occur de novo and are of paternal origin. Cases due to a balanced translocation are mostly of maternal origin and the deletion of distal 4p, including the WHS critical region, is often combined with a duplication of the other chromosomal segment involved in the rearrangement. Here, we report on a newborn female infant with WHS and pure tertiary monosomy due to a 3:1 segregation of a balanced maternal 4;15 translocation. In this context, importance of fluorescence in situ hybridization (FISH) with specific probes to determine the exact breakpoints in unbalanced chromosomal rearrangements with breakpoints localized around known microdeletion syndromes is emphasized.


Subject(s)
Abnormalities, Multiple/diagnosis , Abnormalities, Multiple/genetics , Chromosome Deletion , Chromosomes, Human, Pair 4 , Fetal Growth Retardation , Adult , Fatal Outcome , Female , Fetal Growth Retardation/diagnosis , Fetal Growth Retardation/genetics , Humans , In Situ Hybridization, Fluorescence , Infant, Newborn , Karyotyping , Pregnancy , Syndrome
7.
J Med Genet ; 37(6): 442-5, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10851255

ABSTRACT

We report on a male patient and members of his family with additional material in chromosome 3. This derivative chromosome 3 was transmitted from his mother who had a complex rearrangement between chromosomes 2, 3, and 7. It was possible to delineate her chromosomal rearrangement by microdissection and reverse painting and to exclude these aberrations from being responsible for neonatal deaths and several abortions in this family. Two members of this family suffer from ectrodactyly or split hand/foot malformations (SHFM) of the feet which possibly correlates with the derivative chromosome 7 containing a breakpoint in the SHFM1 critical region involving several homeobox genes.


Subject(s)
Chromosome Breakage/genetics , Foot Deformities, Congenital/genetics , Translocation, Genetic/genetics , Chromosome Banding , Chromosome Painting , Chromosomes, Human, Pair 2/genetics , Chromosomes, Human, Pair 3/genetics , Chromosomes, Human, Pair 7/genetics , Female , Genes, Homeobox/genetics , Genetic Linkage/genetics , Genome , Humans , Infant , Karyotyping , Male , Mothers , Nucleic Acid Hybridization , Pedigree
8.
Chromosome Res ; 7(5): 355-62, 1999.
Article in English | MEDLINE | ID: mdl-10515210

ABSTRACT

Microdissection in combination with reverse painting fluorescence in-situ hybridization (FISH) is a very effective method to identify breakpoints and rearrangements of derived chromosomes and reveal the chromosomal origin of marker chromosomes. We describe an innovation that allows a convenient, fast and safe isolation of microdissected fragments as currently available protocols. The microdissected chromosomes are harvested in a collection drop located in a movable micropipette adjusted to a second micromanipulator under microscopic observation. We used this technique to analyze several cytogenetic aberrations. In order to evaluate the efficiency of our microdissection procedure, we compared the results obtained with microdissection probes made from only one fragment with those obtained with more than six microdissected fragments. In all cases, the single-fragment microdissections were sufficient to provide probes.


Subject(s)
Chromosome Painting/methods , Chromosomes, Human , Translocation, Genetic , DNA Probes , Female , Humans , Karyotyping , Lymphocytes/ultrastructure , Male , Polymerase Chain Reaction
9.
Zentralbl Gynakol ; 120(8): 386-90, 1998.
Article in German | MEDLINE | ID: mdl-9757545

ABSTRACT

It is reported on the results of 250 treatment cycles in which we carried out intracytoplasmic injections (ICSI) with frozen and thawed testicular spermatozoa (cryo-TESE). Up to July 1997 we treated 127 patients, 225 embryo transfers were performed (90%), and an average of 2.3 preimplantation embryos were transferred. This resulted in 53 clinical pregnancies, six patients aborted (11.3%). The pregnancy rate was 21.2% per treatment cycle, 23.5% per embryo transfer, and 41.7% per patient. This so called cumulative pregnancy rate is still about to rise, because 49 out of the 72 non-pregnant patients are still in our ICSI-program. Twenty-two children are born, 2 twins and 1 triplet. All children are healthy and without any major malformations. We conclude from these results that using cryopreserved testicular sperm for ICSI is an effective and successful approach for the treatment of severe testicular insufficiency. In comparison to the use of native testicular sperm with the necessity of repetitive testicular biopsies, cryopreservation is advantageous in many concerns (e.g. logistic, organisatoric and financial) and is therefore recommended for clinical routine.


Subject(s)
Fertilization in Vitro/methods , Spermatozoa/transplantation , Female , Humans , Infant, Newborn , Infertility, Male/etiology , Infertility, Male/therapy , Male , Microinjections , Pregnancy , Pregnancy, Multiple , Retrospective Studies , Semen Preservation , Treatment Outcome
10.
Proc Natl Acad Sci U S A ; 90(6): 2509-11, 1993 Mar 15.
Article in English | MEDLINE | ID: mdl-8460166

ABSTRACT

Scanning force microscopy was used to analyze banded human chromosomes and in situ hybridization patterns of biotinylated DNA probes. In standard human GTG-banded metaphase chromosome preparations (where GTG is G-banding with trypsin-Giemsa), chromosomal morphology and banding patterns were well preserved during the scanning procedure. The smallest identifiable features were in the range of about 100 nm and are similar to the typical structures seen by electron microscopy. In addition, in situ hybridization of human DNA probes of known chromosomal localization was used to map specific hybridization signals. Imaging of the precipitated crystals at the hybridization site clearly demonstrates the superior resolution of scanning force microscopy compared to conventional microscopy.


Subject(s)
Chromosome Banding , Chromosomes, Human/ultrastructure , Chromosomes, Human, Pair 1/ultrastructure , DNA Probes , DNA, Satellite/genetics , Heterochromatin/ultrastructure , Humans , In Situ Hybridization , Lymphocytes/cytology , Lymphocytes/ultrastructure , Microscopy , Trypsin
11.
Mol Microbiol ; 5(10): 2447-58, 1991 Oct.
Article in English | MEDLINE | ID: mdl-1838784

ABSTRACT

The atp operon of Escherichia coli directs synthesis rates of protein subunits that are well matched to the requirements of assembly of the membrane-bound H(+)-ATPase (alpha 3 beta 3 gamma 1 delta 1 epsilon 1a1b2c10-15). Segmental differences in mRNA stability are shown to contribute to the differential control of atp gene expression. The first two genes of the operon, atpl and atpB, are rapidly inactivated at the mRNA level. The remaining seven genes are more stable. It has previously been established that the translational efficiencies of the atp genes vary greatly. Thus differential expression from this operon is achieved via post-transcriptional control exerted at two levels. Neither enhancement of translational efficiency nor insertion of repetitive extragenic palindromic (REP) sequences into the atplB intercistronic region stabilized atpl. We discuss the implications of these results in terms of the pathway of mRNA degradation and of the role of mRNA stability in the control of gene expression.


Subject(s)
Escherichia coli/genetics , Gene Expression Regulation, Bacterial , Genes, Bacterial , Operon , Proton-Translocating ATPases/genetics , RNA, Messenger/genetics , Base Sequence , Chromosomes, Bacterial , Escherichia coli/enzymology , Half-Life , Kinetics , Molecular Sequence Data , Mutagenesis, Insertional , Mutagenesis, Site-Directed , Plasmids , RNA, Antisense/chemical synthesis , RNA, Messenger/metabolism , Restriction Mapping
12.
J Med Virol ; 23(3): 303-9, 1987 Nov.
Article in English | MEDLINE | ID: mdl-2828526

ABSTRACT

The influence of (E)-5-(2-bromovinyl)-2'-deoxyuridine (BVDU), caffeic acid oxidation product (KOP), and trisodiumphosphonoformate (TPF) on the course of the primary cutaneous herpes simplex virus infection was investigated by means of a guinea pig test model. The antiviral substances were applied in an ointment with 10% urea as a penetration mediator. When the treatment was initiated 15 minutes after virus inoculation, 3% BVDU effectively inhibited the development of herpetic vesicles and 0.1% BVDU prevented the appearance of herpetic satellites. Under the same conditions 1% and 3% KOP ointments inhibited the appearance of satellites; and 0.5% TPF ointment completely inhibited the development of cutaneous herpes lesions. Prophylactic drug administration given 24, 20, and 4 hours before virus inoculation was without any protective effect.


Subject(s)
Antiviral Agents/therapeutic use , Bromodeoxyuridine/analogs & derivatives , Caffeic Acids/therapeutic use , Cinnamates/therapeutic use , Herpes Simplex/drug therapy , Organophosphorus Compounds/therapeutic use , Phosphonoacetic Acid/therapeutic use , Animals , Bromodeoxyuridine/therapeutic use , Female , Foscarnet , Guinea Pigs , Humans , Male , Oxidation-Reduction , Phosphonoacetic Acid/analogs & derivatives , Simplexvirus/isolation & purification
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