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1.
J Phys Chem A ; 128(10): 1817-1824, 2024 Mar 14.
Article in English | MEDLINE | ID: mdl-38437187

ABSTRACT

Strong coupling of cavity photons and molecular vibrations creates vibrational polaritons that have been shown to modify chemical reactivity and alter material properties. While ultrafast spectroscopy of vibrational polaritons has been performed intensively in metal complexes, ultrafast dynamics in vibrationally strongly coupled organic molecules remain unexplored. Here, we report ultrafast pump-probe measurement and two-dimensional infrared spectroscopy in diphenylphosphoryl azide under vibrational strong coupling. Early time oscillatory structures indicate coherent energy exchange between the two polariton modes, which decays in ∼2 ps. We observe a large transient absorptive feature around the lower polariton, which can be explained by the overlapped excited-state absorption and derivative-shaped structures around the lower and upper polaritons. The latter feature is explained by the Rabi splitting contraction, which is ascribed to a reduced population in the ground state. These results reassure the previously reported spectroscopic theory to describe nonlinear spectroscopy of vibrational polaritons. We have also noticed the influence of the complicated layer structure of the cavity mirrors. The penetration of the electric field distribution into the layered structure of the dielectric-mirror cavities can significantly affect the Rabi splitting and the decay time constant of polaritonic systems.

2.
J Phys Chem B ; 127(19): 4268-4276, 2023 May 18.
Article in English | MEDLINE | ID: mdl-37159840

ABSTRACT

Ultrafast molecular dynamics are frequently extracted from two-dimensional (2D) spectra via the center line slope (CLS) method. The CLS method depends on the accurate determination of frequencies where the 2D signal is at a maximum, and multiple approaches exist for the determination of that maximum. Various versions of peak fitting for CLS analyses have been utilized; however, the impact of peak fitting on the accuracy and precision of the CLS method has not been reported in detail. Here, we evaluate several versions of CLS analyses using both simulated and experimental 2D spectra. The CLS method was found to be significantly more robust when fits were used to extract the maxima, particularly fitting methods that utilize pairs of opposite-sign peaks. However, we also observed that pairs of opposite-signed peaks required more assumptions than single peaks, which are important to check when interpreting experimental spectra using peak pairs.

3.
J Chem Phys ; 155(24): 241103, 2021 Dec 28.
Article in English | MEDLINE | ID: mdl-34972384

ABSTRACT

We report the results of an attempt to reproduce a reported cavity catalysis of the ester hydrolysis of para-nitrophenyl acetate due to vibrational strong coupling. While we achieved the same light-matter coupling strength and detuning, we did not observe the reported ten-fold increase in the reaction rate constant. Furthermore, no obvious detuning dependence was observed. The inconsistency with the reported literature suggests that cavity catalysis is sensitive to experimental details beyond the onset of vibrational strong coupling. This indicates that other important factors are involved and have been overlooked so far. We find that more investigation into the limits, key factors, and mechanisms to reliably actualize cavity modified reactions is needed.

4.
J Chem Phys ; 152(24): 244102, 2020 Jun 28.
Article in English | MEDLINE | ID: mdl-32610984

ABSTRACT

The increasing number of protein-based metamaterials demands reliable and efficient theoretical and computational methods to study the physicochemical properties they may display. In this regard, we develop a simulation strategy based on Molecular Dynamics (MD) that addresses the geometric degrees of freedom of an auxetic two-dimensional protein crystal. This model consists of a network of impenetrable rigid squares linked through massless rigid rods. Our MD methodology extends the well-known protocols SHAKE and RATTLE to include highly non-linear holonomic and non-holonomic constraints, with an emphasis on collision detection and response between anisotropic rigid bodies. The presented method enables the simulation of long-time dynamics with reasonably large time steps. The data extracted from the simulations allow the characterization of the dynamical correlations featured by the protein subunits, which show a persistent motional interdependence across the array. On the other hand, non-holonomic constraints (collisions between subunits) increase the number of inhomogeneous deformations of the network, thus driving it away from an isotropic response. Our work provides the first long-timescale simulation of the dynamics of protein crystals and offers insights into promising mechanical properties afforded by these materials.


Subject(s)
Molecular Dynamics Simulation , Proteins/chemistry
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