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1.
Clin Exp Immunol ; 137(2): 373-8, 2004 Aug.
Article in English | MEDLINE | ID: mdl-15270855

ABSTRACT

IPEX syndrome is a genetic autoimmune disease characterized by immune-mediated polyendocrinopathy, enteropathy, and X-linked inheritance. We describe a case of IPEX in which lymphocyte phenotypes were assessed at birth, before initiation of Cyclosporin A therapy, and at frequent intervals to 18 months of age. We performed flow cytometry for lymphocyte subtypes and for activation markers (HLA-DR, CD25, and CD69 or CD71). The ratios of both T to B cells and CD4+ to CD8+ cells were elevated at birth, but CD4+ cells were not activated. HLA-DR+ and CD25+ activated T-cells increased in association with two episodes of clinical deterioration: colitis and the onset of type I diabetes mellitus. These results indicate that measures of activation, particularly HLA-DR+ and CD25+ frequency, correlate well with the development of early active disease and may presage clinical episodes. Continuous maintenance of immunosuppression, once started, appears critical for prevention of permanent tissue damage.


Subject(s)
Genetic Diseases, X-Linked/immunology , Polyendocrinopathies, Autoimmune/immunology , Protein-Losing Enteropathies/immunology , Follow-Up Studies , Humans , Immunophenotyping , Infant, Newborn , Lymphocyte Activation/immunology , Male , Syndrome , T-Lymphocyte Subsets/immunology
2.
Clin Exp Immunol ; 133(2): 193-9, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12869024

ABSTRACT

The scurfy mutant mouse is the genetic and phenotypic equivalent of the single-gene human autoimmune disease immunodysregulation, polyendocrinopathy, enteropathy, X-linked (IPEX). The scurfy mutation disrupts the Foxp3 gene, a putative master switch for T regulatory cell development. Bone marrow transplant without conditioning was previously reported to be ineffective in scurfy mice, yet clinical remission occurs in transplanted human IPEX patients despite limited donor engraftment. In view of this contradiction, we sought to validate scurfy as a model for studying the pathogenesis and treatment of human IPEX, in particular the phenomenon of dominant immune regulation. One half of scurfy mice given bone marrow transplants after sublethal irradiation recovered and survived long-term with donor chimerism ranging from 1.7% to 50%. Early transfer of 2 x 107 normal T cell-enriched splenocytes also prevented or limited disease and permitted long-term survival. Donor T cells in rescued mice made up 3-5% of lymphocytes and became highly enriched for CD25+ T cells over time. Transfer of 106 CD4+ CD25+ sorted T cells showed some beneficial effect, while CD4+ CD25- cells did not. Thus, both partial bone marrow transplant and T-enriched splenocyte transfer are effective treatments for scurfy. These results indicate that scurfy results from a lack of cells with dominant immune regulatory capacity, possibly T regulatory cells. The potency of small numbers of normal cells indicates that IPEX may be a feasible target for gene therapy.


Subject(s)
Autoimmune Diseases/therapy , Bone Marrow Transplantation , DNA-Binding Proteins/genetics , Lymphocyte Transfusion , Animals , Autoimmune Diseases/genetics , Autoimmune Diseases/pathology , Female , Forkhead Transcription Factors , Mice , Mice, Inbred C57BL , Polyendocrinopathies, Autoimmune/genetics , Polyendocrinopathies, Autoimmune/pathology , Polyendocrinopathies, Autoimmune/therapy , Survival Analysis , T-Lymphocytes/transplantation , Treatment Outcome
3.
J Med Genet ; 39(8): 537-45, 2002 Aug.
Article in English | MEDLINE | ID: mdl-12161590

ABSTRACT

Immunodysregulation, polyendocrinopathy, enteropathy, X linked (IPEX, OMIM 304790) is a rare, recessive disorder resulting in aggressive autoimmunity and early death. Mutations in FOXP3 have been identified in 13 of 14 patients tested. Research in the mouse model, scurfy, suggests that autoimmunity may stem from a lack of working regulatory T cells. We review published reports regarding the genetics, clinical features, immunology, pathology, and treatment of IPEX. We also report three new patients who were treated with long term immunosuppression, followed by bone marrow transplantation in two. IPEX can be differentiated from other genetic immune disorders by its genetics, clinical presentation, characteristic pattern of pathology, and, except for high IgE, absence of substantial laboratory evidence of immunodeficiency. While chronic treatment with immunosuppressive drugs may provide temporary benefit for some patients, it does not cause complete remission. Remission has been observed with bone marrow transplantation despite incomplete engraftment, but the long term outcome is uncertain.


Subject(s)
Autoimmune Diseases/diagnosis , Autoimmune Diseases/genetics , Protein-Losing Enteropathies/genetics , Protein-Losing Enteropathies/immunology , Adolescent , Animals , Autoimmune Diseases/radiotherapy , Autoimmune Diseases/therapy , Child , Child, Preschool , Diabetes Mellitus, Type 1/diagnosis , Diabetes Mellitus, Type 1/genetics , Diabetes Mellitus, Type 1/radiotherapy , Diabetes Mellitus, Type 1/therapy , Diagnosis, Differential , Disease Models, Animal , Humans , Lymphoproliferative Disorders/diagnosis , Lymphoproliferative Disorders/genetics , Lymphoproliferative Disorders/radiotherapy , Lymphoproliferative Disorders/therapy , Male , Polyendocrinopathies, Autoimmune/diagnosis , Polyendocrinopathies, Autoimmune/genetics , Polyendocrinopathies, Autoimmune/radiotherapy , Polyendocrinopathies, Autoimmune/therapy , Protein-Losing Enteropathies/radiotherapy , Protein-Losing Enteropathies/therapy , Syndrome
4.
J Pediatr ; 138(4): 577-80, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11295725

ABSTRACT

We describe an unusual family with a fatal genetic syndrome of neonatal diabetes mellitus (DM), enteropathy, endocrinopathy, and severe infections with variable thrombocytopenia. All affected individuals are male; X-linked inheritance is likely. The most common clinical features are neonatal DM, inanition, and enteropathy; a variety of other autoimmune phenomena are less frequent. Clinical variability within and among families is common, including lack of one or more cardinal features. The syndrome is usually fatal, but survival is sometimes possible with immunosuppressive therapy. Clinical variability and frequent new mutations may contribute to poor recognition and underreporting of similar cases.


Subject(s)
Abnormalities, Multiple/genetics , X Chromosome , Abnormalities, Multiple/diagnosis , Abnormalities, Multiple/drug therapy , Diabetes Mellitus/diagnosis , Diabetes Mellitus/genetics , Endocrine System Diseases/diagnosis , Endocrine System Diseases/genetics , Gastrointestinal Diseases/diagnosis , Gastrointestinal Diseases/genetics , Humans , Immunosuppressive Agents/therapeutic use , Infant, Newborn , Male , Pedigree , Prognosis , Sex Distribution , Syndrome , Thrombocytopenia/diagnosis , Thrombocytopenia/genetics , X Chromosome/genetics
5.
Nat Genet ; 27(1): 18-20, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11137992

ABSTRACT

To determine whether human X-linked neonatal diabetes mellitus, enteropathy and endocrinopathy syndrome (IPEX; MIM 304930) is the genetic equivalent of the scurfy (sf) mouse, we sequenced the human ortholog (FOXP3) of the gene mutated in scurfy mice (Foxp3), in IPEX patients. We found four non-polymorphic mutations. Each mutation affects the forkhead/winged-helix domain of the scurfin protein, indicating that the mutations may disrupt critical DNA interactions.


Subject(s)
Animal Diseases/genetics , DNA-Binding Proteins/genetics , Diabetes Mellitus/congenital , Diabetes Mellitus/genetics , Polyendocrinopathies, Autoimmune/genetics , Protein-Losing Enteropathies/genetics , X Chromosome/genetics , Amino Acid Sequence , Animals , DNA Mutational Analysis , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/metabolism , Disease Models, Animal , Forkhead Transcription Factors , Genetic Linkage/genetics , Humans , Infant, Newborn , Mice , Mice, Mutant Strains , Molecular Sequence Data , Mutation/genetics , Sequence Alignment , Syndrome
6.
Pediatrics ; 103(3): 632-9, 1999 Mar.
Article in English | MEDLINE | ID: mdl-10049968

ABSTRACT

OBJECTIVE: To ascertain the clinical scenarios in which genetic testing for congenital nephrogenic diabetes insipidus (NDI) by direct detection of mutations might prove valuable, and to assess the use of automated sequencing for testing. METHODS: We reviewed NDI cases referred to our research laboratory for enrollment in our study of mutations in the AVPR2 gene that is disrupted in the X-linked form of the disease. We selected 5 cases that illustrate the value of genetic testing in different clinical situations. Clinical information was obtained from the patient's personal physicians and the patients' families. Direct automated fluorescent DNA sequencing of AVPR2 gene amplification product was used to identify disease-associated mutations in patients. The presence or absence of mutations in family members was then established by using automated sequencing, restriction enzyme analysis, or both. RESULTS: In 2 of the 5 selected cases, the diagnosis of a genetic form of NDI was confirmed by mutation analysis in a sporadic case of an affected boy. In 2 cases, a suspected diagnosis of X-linked NDI was confirmed in an affected girl. In 4 of the cases, 1 or more unaffected female relatives were determined to carry or not to carry the disease-associated gene. In 2 cases, testing of the newborn child of a known or suspected carrier confirmed the clinical suspicion of affected status and justified proactive therapy. In 4 of the 5 cases, the mode of inheritance was not clear from the family history and was established as X-linked by the testing. Assay for restriction sites changed by disease-associated mutations agreed with the automated sequencing results. CONCLUSIONS: We conclude that direct mutation analysis in patients suspected of NDI and in selected family members is indicated. The results of testing can confirm a clinical diagnosis of disease, which may otherwise be difficult to make in girls. It can further establish the mode of inheritance, unambiguously distinguish carriers from noncarriers, and justify special observation or treatment of newborns at risk, thereby averting dehydration and the attendant complications. We also conclude that, with proper controls, automated sequencing is the preferred method of testing, because it is sufficiently robust, sensitive, and adaptable for this short gene with a large variety of causative mutations.


Subject(s)
DNA Mutational Analysis , Diabetes Insipidus, Nephrogenic/genetics , Base Sequence , Child , Child, Preschool , Female , Genetic Carrier Screening , Genetic Linkage , Genetic Variation , Heterozygote , Humans , Infant , Male , Retrospective Studies , X Chromosome
7.
Mol Immunol ; 36(15-16): 979-92, 1999.
Article in English | MEDLINE | ID: mdl-10698302

ABSTRACT

The distribution and quantity of cellular signaling elements influence response patterns to a variety of stimuli. As protein tyrosine phosphorylation is a requisite event induced by a majority of surface receptors, and protein tyrosine kinases of the src-family (src-PTKs) act as proximal transducers for many hematopoietic receptors, we have designed a quantitative RT-PCR assay to measure src-family PTK expression during critical stages of lymphocyte ontogeny. With this assay we demonstrate that the distal promoter element regulating expression of lck, a src-PTK essential for T-cell development and activation, is similarly regulated during ontogeny of T and B cells. However, lck transcript abundance is drastically reduced in B lineage cells, suggesting that transcriptional elements influencing lck promoter activity are modulated in these cells. Moreover, although transcripts encoding the src-PTK fyn accumulate at 0.1% of lck mRNA levels in thymocytes, diminished activity of the lck distal promoter in the B-cell background brings lck and fyn transcript levels to near equivalence in this population. Importantly, transcripts arising from the lck distal promoter element and the fyn locus are similarly upregulated during developmental transitions associated with antigen-receptor expression in both B and T cells. These findings suggest that although the magnitude of lck and fyn expression is differentially regulated in B and T cells, expression at these loci is similarly developmentally programmed during ontogeny of both lymphocyte lineages.


Subject(s)
Lymphocytes/enzymology , src-Family Kinases/genetics , Animals , B-Lymphocytes/cytology , B-Lymphocytes/enzymology , B-Lymphocytes/immunology , DNA Primers/genetics , Female , Fetus/cytology , Fetus/immunology , Fetus/metabolism , Gene Expression Regulation, Developmental , Hematopoiesis , Lymphocyte Specific Protein Tyrosine Kinase p56(lck)/genetics , Lymphocytes/cytology , Lymphocytes/immunology , Mice , Mice, Inbred C57BL , Peptide Elongation Factor 1/genetics , Peptide Elongation Factor 1/standards , Polymerase Chain Reaction/methods , Polymerase Chain Reaction/standards , Pregnancy , Promoter Regions, Genetic , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins c-fyn , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reference Standards , T-Lymphocytes/cytology , T-Lymphocytes/enzymology , T-Lymphocytes/immunology
8.
Kidney Int ; 54(6): 1909-22, 1998 Dec.
Article in English | MEDLINE | ID: mdl-9853256

ABSTRACT

BACKGROUND: The AVPR2 gene encodes the type 2 vasopressin receptor, a member of the vasopressin/oxytocin receptor subfamily of G protein-coupled receptors. Disruption of AVPR2 causes X-linked congenital nephrogenic diabetes insipidus (NDI), yet the functional significance of most gene sequence variations found in association with NDI has not been proven. The large number of naturally occurring AVPR2 mutations constitutes a model system for studying the structure-function relationship of G protein-coupled receptors. This analysis can be aided by examining amino acid sequence variation and conservation among evolutionarily disparate members of the subfamily. METHODS: Twenty-five new NDI patients were evaluated by DNA sequencing for mutations in AVPR2. Receptors encoded by eighteen NDI alleles were tested for physiologic signaling activity in response to varying concentrations of arginine vasopressin (AVP) in a sensitive cell culture assay. Seventeen amino acid sequences from the vasopressin/oxytocin receptor subfamily were aligned and conserved residues were identified and correlated with the locations of NDI associated variations. RESULTS: Twenty-four variant alleles were found among the 25 new patients. Thirteen had no prior family history of expressed NDI. All 18 of the NDI-associated AVPR2 alleles tested for function demonstrated diminished response to stimulation with AVP. Twelve failed to respond at all, whereas six signaled only at high AVP concentrations. Evolutionarily conserved residues clustered in the transmembrane domains and in the first and second extracellular loops, and NDI-associated missense mutations appeared mostly in the conserved domains. CONCLUSIONS: Sporadic cases are frequent and they usually represent the X-linked rather than the autosomal form of NDI. Genetic and functional testing can confirm this in individual cases. Mutations in this study affecting ligand binding domains tend to retain partial signaling in vitro, whereas those that introduce a charged residue in a transmembrane domain are inactive. The minimal partial signaling observed in cultured cells is unlikely to correlate with clinically significant urine concentrating ability. Other AVPR2 mutations with milder effects on receptor function probably exist, but may not be expressed clinically as typical NDI.


Subject(s)
Diabetes Insipidus, Nephrogenic/metabolism , Genetic Variation , Receptors, Vasopressin/genetics , Receptors, Vasopressin/physiology , Amino Acid Sequence/genetics , Animals , Conserved Sequence , Diabetes Insipidus, Nephrogenic/genetics , Female , Genetic Variation/physiology , Humans , Infant , Infant, Newborn , Male , Mutation/physiology , Oxytocin/analogs & derivatives , Oxytocin/metabolism , Receptors, Cell Surface/genetics , Receptors, Oxytocin/genetics
9.
Am J Med Genet ; 80(2): 121-7, 1998 Nov 02.
Article in English | MEDLINE | ID: mdl-9805127

ABSTRACT

The clinical findings of eight families with Stickler syndrome were analyzed and compared with the results of linkage studies using a marker for the type II collagen gene (COL2A1). In six families, there was linkage of the phenotype to COL2A1. The manifestations of the affected individuals were similar to those of the original Stickler syndrome family [Stickler et al., Mayo. Clin. Proc. 40:433-455, 1965] and resembled the phenotype of the previously reported individuals or families with Stickler syndrome in which a dominant mutation in the COL2A1 gene has been identified. Linkage to COL2A1 was excluded in the two remaining families. The most striking difference between these two types of families was the absence of severe myopia and retinal detachment in the two unliked families. In the COL2A1 unlinked families, linkage of the phenotype to genes (COL11A1 and COL11A2) that encode pro alpha chains of type XI collagen, a minor cartilage-specific collagen, was also excluded. Since Stickler syndrome can be produced by mutations in COL2A1, COL11A1, and COL11A2, our data suggest that there is at least a fourth locus for Stickler syndrome.


Subject(s)
Collagen/genetics , Connective Tissue Diseases/genetics , Genetic Linkage , Female , Humans , Male , Pedigree , Phenotype , Syndrome
10.
J Immunol ; 155(3): 1286-95, 1995 Aug 01.
Article in English | MEDLINE | ID: mdl-7636195

ABSTRACT

The lymphocyte-specific proto-oncogene lck is transcribed from two developmentally regulated, independently functioning promoters. The proximal promoter is used in thymocytes, but not in peripheral T lymphocytes. The distal promoter operates in all stages of T cell development, but predominates in more mature cells. Both promoters lack a TATAA element and they share little sequence similarity with each other. Using transgenic mice to locate in vivo functional cis-acting regions of the murine distal promoter, we defined a region from -1786 to -2913 that is essential for consistent insertion site-independent expression of a heterologous cDNA reporter. The transgene is lymphoid specific and expressed predominantly in T cells. One of four transgenic mice bearing a shortened distal promoter (-886 to +41) expressed the reporter in the expected developmental pattern, suggesting that important regulatory elements that require favorable flanking sequences for expression are present nearer the transcription start site. The DNA sequence from -4032 to +623 contains few consensus binding sites for previously described T lymphocyte-specific trans-acting factors, and their locations do not correlate well with the functional data. However, the locations of tissue-specific modifications of chromatin structure in the promoter region, manifest as sites of DNase hypersensitivity, correlated with these two functional regions in normal mice. The identification of lck distal promoter regulatory regions provides a useful control element for deliberate expression of transgenes in mature T lymphocytes. In addition, these regulatory regions should assist in defining T cell-specific trans-acting factors.


Subject(s)
Mice/genetics , Promoter Regions, Genetic , Protein-Tyrosine Kinases/genetics , Regulatory Sequences, Nucleic Acid , T-Lymphocytes/enzymology , Animals , B-Lymphocytes/cytology , B-Lymphocytes/enzymology , Cell Differentiation , Chromatin/genetics , Chromatin/ultrastructure , DNA, Complementary/genetics , Enzyme Induction , Gene Expression Regulation, Developmental , Genes , Genes, Reporter , Lymphocyte Specific Protein Tyrosine Kinase p56(lck) , Mice, Transgenic , Molecular Sequence Data , Organ Specificity , Recombinant Fusion Proteins/biosynthesis , T-Lymphocytes/cytology , Transcription, Genetic
11.
Am J Hum Genet ; 55(2): 266-77, 1994 Aug.
Article in English | MEDLINE | ID: mdl-7913579

ABSTRACT

Mutations in the AVPR2 gene encoding the receptor for arginine vasopressin in the kidney (V2 ADHR) have been reported in patients with congenital nephrogenic diabetes insipidus, a predominantly X-linked disorder of water homeostasis. We have used restriction-enzyme analysis and direct DNA sequencing of genomic PCR product to evaluate the AVPR2 gene in 11 unrelated affected males. Each patient has a different DNA sequence variation, and only one matches a previously reported mutation. Cosegregation of the variations with nephrogenic diabetes insipidus was demonstrated for two families, and a de novo mutation was documented in two additional cases. Carrier detection was accomplished in one family. All the variations predict frameshifts, truncations, or nonconservative amino acid substitutions in evolutionarily conserved positions in the V2 ADHR and related receptors. Of interest, a 28-bp deletion is found in one patient, while another, unrelated patient has a tandem duplication of the same 28-bp segment, suggesting that both resulted from the same unusual unequal crossing-over mechanism facilitated by 9-mer direct sequence repeats. Since the V2 ADHR is a member of the seven-transmembrane-domain, G-protein-coupled receptor superfamily, the loss-of-function mutations from this study and others provide important clues to the structure-function relationship of this and related receptors.


Subject(s)
Diabetes Insipidus/congenital , Diabetes Insipidus/genetics , Kidney Diseases/genetics , Mutation , Receptors, Vasopressin/genetics , X Chromosome , Arginine Vasopressin/metabolism , Base Sequence , Crossing Over, Genetic , DNA Mutational Analysis , Deoxyribonucleases, Type II Site-Specific , Electrophoresis, Polyacrylamide Gel , Frameshift Mutation , Humans , Infant , Infant, Newborn , Male , Molecular Sequence Data , Oligonucleotide Probes , Pedigree , Point Mutation , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Receptors, Vasopressin/chemistry , Sequence Deletion , Structure-Activity Relationship
12.
J Exp Med ; 173(2): 383-93, 1991 Feb 01.
Article in English | MEDLINE | ID: mdl-1988541

ABSTRACT

In the mouse and human, mRNA transcripts encoding the lymphocyte-specific protein tyrosine kinase p56lck are derived from two separate promoters resulting in heterogeneity in the 5' untranslated region sequence. The proximal promoter lies just 5' to the coding region for the gene and is active only in thymocytes. In contrast, the distal promoter lies 34 kilobases (kb) 5' in the human, and is active both in thymocytes and mature peripheral T cells. As previously reported, transgenic mice bearing functional proximal promoter sequence juxtaposed with the SV40 large T antigen gene invariably develop lymphoid tumors confined to the thymus. In the current work, transgenic mice bearing a 2.6-kb fragment of the human distal promoter fused to the SV40 large T antigen gene express large T antigen in thymocytes and in peripheral lymphoid cells, and develop tumors of both the thymus and the peripheral lymphoid organs. The ability of the human distal promoter to function appropriately in transgenic mice is consistent with the strong similarity observed between the mouse and human distal promoter sequences. With the exception of a single short interval that serves as a target for binding of nuclear factors, significant sequence similarity is not seen when the distal and proximal promoter sequences are compared. Hence, developmentally regulated, lineage-specific transcription of the lck gene is mediated by distinct promoter sequences that appear to be capable of functioning independently.


Subject(s)
Gene Expression Regulation/genetics , Protein-Tyrosine Kinases/genetics , T-Lymphocytes/metabolism , Animals , Antigens, Polyomavirus Transforming/genetics , Base Sequence , Cloning, Molecular , DNA/metabolism , Humans , Lymphocyte Specific Protein Tyrosine Kinase p56(lck) , Lymphoid Tissue/metabolism , Mice , Mice, Inbred BALB C , Mice, Transgenic , Molecular Sequence Data , Nuclear Proteins/metabolism , Oligonucleotide Probes , Promoter Regions, Genetic/genetics
13.
Cell ; 46(7): 1001-9, 1986 Sep 26.
Article in English | MEDLINE | ID: mdl-3019559

ABSTRACT

In mammary tumors induced by the mouse mammary tumor virus (MMTV), the int-1 gene is frequently activated by adjacent proviral insertions and is thereby strongly implicated in tumorigenesis. To seek a direct biological effect of int-1 that would validate its proposed role as an oncogene, we constructed a retrovirus vector containing the gene and examined its effects on tissue culture cells. Expression of int-1 in a mammary epithelial cell line caused striking morphological changes, unrestricted growth at high cell density, and focus formation on a monolayer, although the cells were not tumorigenic in vivo. This partial transformation induced by int-1 was not observed in cells infected by an otherwise identical virus bearing a frameshift mutation in the gene. These findings strongly support the hypothesis that int-1 plays a functional role in MMTV-induced mammary tumorigenesis.


Subject(s)
Cell Transformation, Neoplastic/genetics , Mammary Neoplasms, Experimental/genetics , Proto-Oncogenes , Animals , Cell Adhesion , Cell Cycle , Cell Line , DNA Replication , Gene Expression Regulation , Genetic Vectors , Hydrogen-Ion Concentration , Leukemia Virus, Murine , Mice
14.
Am J Hum Genet ; 36(4): 736-49, 1984 Jul.
Article in English | MEDLINE | ID: mdl-6089548

ABSTRACT

We have used a cDNA clone of the human urea cycle enzyme argininosuccinate synthetase (AS) to screen for restriction fragment length polymorphisms (RFLPs) using a large panel of restriction enzymes. The probe, pAS-1, detects from 15 to 27 human DNA fragments by Southern gel analysis. In addition to the structural locus on chromosome 9, AS-like sequences are found on at least 10 human chromosomes, including the X and Y. This large number of dispersed pseudogenes accounts for the multiplicity of hybridizing fragments detected with pAS-1. Of 37 restriction enzymes tested, 18 produced excellent digest patterns; of these 18 enzymes, three revealed high-frequency, independent RFLPs, testing a minimum of 16 individuals with each enzyme. The enzymes producing high-frequency polymorphisms are Hind III (allele frequencies .30 and .70), Hind II (.13 and .87), and Bam HI (.56 and .44). Most of the polymorphic alleles are found in Caucasians, American blacks, and Orientals. The RFLP detected with Hind III maps to chromosome 9 (9q11-q22), although not to the structural locus; the others are autosomal but otherwise unassigned. Two additional six-base enzymes and a four-base enzyme, Msp I, revealed further individual variation, but these variants have not been shown to segregate in families yet. We observed approximately 0.8% high-frequency RFLPs per cut site per enzyme or a minimum of .05% heterozygosity per nucleotide. pAS-1 should prove useful in assigning high-frequency RFLPs to several human chromosomes.


Subject(s)
Argininosuccinate Synthase/genetics , DNA Restriction Enzymes , DNA/genetics , Deoxyribonucleases, Type II Site-Specific , Ligases/genetics , Polymorphism, Genetic , Adult , Alleles , Black People , Deoxyribonuclease BamHI , Deoxyribonuclease HindIII , Electrophoresis, Agar Gel , Female , Gene Frequency , Humans , Male , Nucleic Acid Hybridization , Pedigree , White People
16.
Biochem Genet ; 19(7-8): 673-85, 1981 Aug.
Article in English | MEDLINE | ID: mdl-6794564

ABSTRACT

Isoelectric focusing of human plasma samples labeled in vitro with [125I]-thyroxine reveals considerable biochemical and genetic variation in thyroxine-binding globulin. (1) In all individuals tested, at least three primary isoelectric bands are seen in the pH range of 4.2 to 4.5, with additional bands at lower pH ranges. Similar patterns are produced by plasma from nonhuman primates. These band differences appear to be the result of differences in sialic acid content. TBG produces a single electrophoretic band on standard polyacrylamide gel electrophoresis. (2) Genetically determined, X-linked differences in electrophoretic mobility of TBG are observed in several human populations. Female homozygotes or male hemizygotes for the TBG slow variant (TBG-S) produce band patterns shifted by 0.5 pH unit cathodal to the common pattern (TBG-C). Female heterozygotes produce patterns with six-plus bands, representing the simple sum of the common and slow types. This difference is not the result of differences in sialic acid content. The gene frequency of this variant is 10% in American Blacks. (3) In pregnant women additional anodal bands are observed, giving the impression of a "shift," by integral steps, in the pattern relative to the nonpregnant type. This shift is abolished by mild neuraminidase treatment.


Subject(s)
Genetic Variation , Thyroxine-Binding Proteins/genetics , Animals , Female , Fetal Blood/analysis , Humans , Infant, Newborn , Isoelectric Focusing/methods , Pregnancy , Primates , Species Specificity
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