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1.
BMC Pulm Med ; 16: 16, 2016 Jan 22.
Article in English | MEDLINE | ID: mdl-26801409

ABSTRACT

BACKGROUND: The Lung Cancer Risk Test (LCRT) trial is a prospective cohort study comparing lung cancer incidence among persons with a positive or negative value for the LCRT, a 15 gene test measured in normal bronchial epithelial cells (NBEC). The purpose of this article is to describe the study design, primary endpoint, and safety; baseline characteristics of enrolled individuals; and establishment of a bio-specimen repository. METHODS/DESIGN: Eligible participants were aged 50-90 years, current or former smokers with 20 pack-years or more cigarette smoking history, free of lung cancer, and willing to undergo bronchoscopic brush biopsy for NBEC sample collection. NBEC, peripheral blood samples, baseline CT, and medical and demographic data were collected from each subject. DISCUSSION: Over a two-year span (2010-2012), 403 subjects were enrolled at 12 sites. At baseline 384 subjects remained in study and mean age and smoking history were 62.9 years and 50.4 pack-years respectively, with 34% current smokers. Obstructive lung disease (FEV1/FVC <0.7) was present in 157 (54%). No severe adverse events were associated with bronchoscopic brushing. An NBEC and matched peripheral blood bio-specimen repository was established. The demographic composition of the enrolled group is representative of the population for which the LCRT is intended. Specifically, based on baseline population characteristics we expect lung cancer incidence in this cohort to be representative of the population eligible for low-dose Computed Tomography (LDCT) lung cancer screening. Collection of NBEC by bronchial brush biopsy/bronchoscopy was safe and well-tolerated in this population. These findings support the feasibility of testing LCRT clinical utility in this prospective study. If validated, the LCRT has the potential to significantly narrow the population of individuals requiring annual low-dose helical CT screening for early detection of lung cancer and delay the onset of screening for individuals with results indicating low lung cancer risk. For these individuals, the small risk incurred by undergoing once in a lifetime bronchoscopic sample collection for LCRT may be offset by a reduction in their CT-related risks. The LCRT biospecimen repository will enable additional studies of genetic basis for COPD and/or lung cancer risk. TRIAL REGISTRATION: The LCRT Study, NCT 01130285, was registered with Clinicaltrials.gov on May 24, 2010.


Subject(s)
Epithelial Cells/metabolism , Lung Diseases, Obstructive/epidemiology , Lung Neoplasms/epidemiology , Occupational Exposure/statistics & numerical data , Smoking/epidemiology , Aged , Aged, 80 and over , Agriculture , Asbestos , Biological Specimen Banks , Bronchi/cytology , Bronchi/metabolism , Bronchoscopy , Cohort Studies , Early Detection of Cancer , Female , Forced Expiratory Volume , Genetic Predisposition to Disease , Humans , Incidence , Lung Diseases, Obstructive/physiopathology , Lung Neoplasms/diagnostic imaging , Lung Neoplasms/genetics , Male , Middle Aged , Prospective Studies , Respiratory Mucosa/cytology , Respiratory Mucosa/metabolism , Risk Assessment/methods , Tomography, Spiral Computed , Vital Capacity
2.
Carcinogenesis ; 28(12): 2552-9, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17893230

ABSTRACT

Marked inter-individual variation in lung cancer risk cannot be accounted for solely by cigarette smoke and other environmental exposures. Evidence suggests that variation in bronchial epithelial cell expression of key DNA repair genes plays a role. Variation in these genes correlates with variation in expression of CEBPG and E2F1 transcription factors. Here, we investigated the mechanistic basis for correlation of the DNA repair gene ERCC5 (previously known as XPG) with CEBPG and E2F1. CEBPG expression vector transfected into H23 or H460 cell lines up-regulated endogenous ERCC5 and also luciferase from a reporter construct containing 589 bp of ERCC5 5' regulatory region. A recognition site for CEBPG and a region containing sites for YY1 on the sense strand and E2F1 on the anti-sense strand participated in CEBPG up-regulation of ERCC5. CEBPG, E2F1 and YY1 binding to their respective sites were confirmed by electrophoretic mobility shift assay. Thus, we conclude that CEBPG regulates ERCC5 expression and this regulation is modified by E2F1/YY1 interactions. Several polymorphisms have been identified in these regions and, based on the data presented here, it is reasonable to hypothesize that they may contribute to risk for bronchogenic carcinoma.


Subject(s)
CCAAT-Enhancer-Binding Proteins/physiology , DNA-Binding Proteins/biosynthesis , E2F1 Transcription Factor/physiology , Endonucleases/biosynthesis , Epithelial Cells/metabolism , Lung Neoplasms/metabolism , Nuclear Proteins/biosynthesis , Transcription Factors/biosynthesis , YY1 Transcription Factor/physiology , Binding Sites , Bronchi/cytology , CCAAT-Enhancer-Binding Proteins/genetics , Cells, Cultured , DNA Repair , DNA-Binding Proteins/genetics , E2F1 Transcription Factor/genetics , Endonucleases/genetics , Gene Expression Regulation, Neoplastic , Humans , Lung Neoplasms/genetics , Nuclear Proteins/genetics , Polymorphism, Genetic , Respiratory Mucosa/cytology , Transcription Factors/genetics , YY1 Transcription Factor/genetics
3.
Mol Diagn ; 6(4): 217-25, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11774186

ABSTRACT

BACKGROUND: A method that provides standardized data and is relatively inexpensive and capable of high throughput is a prerequisite to the development of a meaningful gene expression database suitable for conducting multi-institutional clinical studies based on expression measurement. Standardized RT (StaRT)-PCR has all these characteristics. In addition, the method must be reproducible. StaRT-PCR has high intralaboratory reproducibility. The purpose of this study is to determine whether StaRT-PCR provides similar interlaboratory reproducibility. METHODS AND RESULTS: In a blinded interlaboratory study, expression of ten genes was measured by StaRT-PCR in a complementary DNA sample provided to each of four laboratories. The average coefficient of variation for interlaboratory comparison of the nine quantifiable genes was 0.48. In all laboratories, expression of one of the genes was too low to be measured. CONCLUSION: Because StaRT-PCR data are standardized and numerical and the method is reproducible among multiple laboratories, it will allow development of a meaningful gene expression database.


Subject(s)
Gene Expression Profiling/standards , Reverse Transcriptase Polymerase Chain Reaction/standards , Binding, Competitive/genetics , Cell Line , DNA, Complementary/genetics , Databases, Genetic , Double-Blind Method , Gene Expression , Gene Expression Profiling/classification , Gene Expression Profiling/statistics & numerical data , Humans , Lung/chemistry , Lung/cytology , Lung/metabolism , RNA, Messenger/genetics , Reverse Transcriptase Polymerase Chain Reaction/statistics & numerical data , Templates, Genetic , Terminology as Topic
4.
Cancer Res ; 60(6): 1609-18, 2000 Mar 15.
Article in English | MEDLINE | ID: mdl-10749130

ABSTRACT

Normal bronchial epithelial cells (NBECs) are at risk for damage from inhaled and endogenous oxidative species and from epoxide metabolites of inhaled polycyclic aromatic hydrocarbons. Epidemiological and in vitro data suggest that interindividual variation in this risk may result from variation in NBEC expression of enzymes that inactivate reactive species by conjugating them to glutathione. Quantitative competitive reverse transcription-PCR was used to measure mRNA levels of glutathione transferases (GSTs) and glutathione peroxidases (GSHPxs) in primary NBECs from subjects with or without bronchogenic carcinoma. Mean expression levels (mRNA/10(3) beta-actin mRNA) in NBECs from 23 subjects without bronchogenic carcinoma compared to those from 11 subjects with bronchogenic carcinoma respectively (in parentheses) were: mGST (26.0, 6.11), GSTM3 (0.29, 0.09), combined GSTM1,2,4,5 (0.98, 0.60), GSTT1 (0.84, 0.76), GSTP1 (287, 110), GSHPx (140, 62.1), and GSHPxA (0.43, 0.34). Levels of GSTP1, GSTM3, and GSHPx were significantly (P < 0.05) lower in NBECs from subjects with bronchogenic carcinoma. Further, the gene expression index formed by multiplying the values for mGST x GSTM3 x GSHPx x GSHPxA x GSTP1 had a sensitivity (90%) and specificity (76%) for detecting NBECs from bronchogenic carcinoma subjects that was better than any individual gene. In cultured NBECs derived from eight individuals without bronchogenic carcinoma and incubated under identical conditions such that environmental effects were minimized, the mean level of expression and degree of interindividual variation for each gene evaluated was less than that observed in primary NBECs. Data from these studies support the hypotheses that (a) interindividual variation in risk for bronchogenic carcinoma results in part from interindividual variation in NBEC expression of antioxidant genes; (b) gene expression indices will better identify individuals at risk for bronchogenic carcinoma than individual gene expression values; and (c) both hereditary and environmental exposures contribute to the level of and interindividual variation in gene expression observed in primary NBECs. Many epidemiological studies have been designed to evaluate risk associated with polymorphisms or gene expression levels of putative susceptibility genes based on measurements in surrogate tissues, such as peripheral blood lymphocytes. Based on data presented here, it will be important to include the assessment of NBECs in future studies. Measurement of antioxidant gene expression in NBECs may identify the 5-10% of individuals at risk for bronchogenic carcinoma. Bronchoscopic sampling of NBECs from smokers and ex-smokers then will allow susceptible individuals to be entered into surveillance and/or chemoprevention studies.


Subject(s)
Bronchi/enzymology , Carcinoma, Bronchogenic/enzymology , Glutathione Peroxidase/genetics , Glutathione Transferase/genetics , Lung Neoplasms/enzymology , Adolescent , Adult , Age Factors , Aged , Analysis of Variance , Bronchi/cytology , Carcinoma, Bronchogenic/genetics , Cell Line , Cells, Cultured , Epithelial Cells/enzymology , Female , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Neoplastic , Humans , Lung Neoplasms/genetics , Male , Middle Aged , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reproducibility of Results , Reverse Transcriptase Polymerase Chain Reaction , Sex Factors , Smoking
5.
Carcinogenesis ; 21(2): 205-11, 2000 Feb.
Article in English | MEDLINE | ID: mdl-10657959

ABSTRACT

Radon exposure is associated with increased risk for bronchogenic carcinoma. Mutagenesis analyses have revealed that radon induces mostly multi-locus chromosome deletions. Based on these findings, it was hypothesized that deletion analysis of multiple radon-induced malignant transformants would reveal common mutations in chromosomal regions containing tumor suppressor genes responsible for malignant transformation. This hypothesis was supported by a previous study in which tumorigenic derivatives of the human papillomavirus 18-immortalized human bronchial epithelial cell line BEP2D were established following irradiation with 30 cGy of high linear energy transfer radon-simulated alpha-particles. Herein, we describe the analyses of 10 additional tumorigenic derivative cell lines resulting from the irradiation of five additional independent BEP2D populations. The new transformants have common cytogenetic changes, including the loss of chromosome (ch)Y, one of three copies of ch8, one of two copies of ch11p15-pter and one of three copies of ch14. These changes are the same as those reported previously. Analysis of PCR-amplified short tandem repeats of informative loci confirmed the loss of heterozygosity (LOH) at 12 loci spanning the length of ch8 in cell lines from four of the total of eight irradiation treatments to date and the loss of chY in all cell lines (8 of 8). LOH analysis with a total of 17 informative loci confirmed loss on ch14 in transformants from seven of eight irradiation treatments and indicated a 0.5-1.7 cM region of common involvement centered around locus D14S306. No LOH was detected at any of the informative loci on ch11. The overall results support our stated hypothesis. Further studies are currently in progress to determine whether the ch8 and ch14 regions contain genes with tumor suppressor function in bronchial epithelial cells.


Subject(s)
Bronchi/chemistry , Chromosomes, Human, Pair 14/genetics , Chromosomes, Human, Pair 8/genetics , Cocarcinogenesis , Genes, Tumor Suppressor , Lung Neoplasms/genetics , Neoplasms, Radiation-Induced/genetics , Repetitive Sequences, Nucleic Acid , Alpha Particles , Aneuploidy , Animals , Bronchi/pathology , Bronchi/radiation effects , Bronchi/virology , Cell Line, Transformed/transplantation , Cell Transformation, Viral/radiation effects , Chromosome Aberrations , Chromosome Deletion , Chromosomes, Human/radiation effects , Chromosomes, Human, Pair 14/radiation effects , Chromosomes, Human, Pair 8/radiation effects , Epithelial Cells/chemistry , Epithelial Cells/pathology , Epithelial Cells/radiation effects , Epithelial Cells/transplantation , Epithelial Cells/virology , Genetic Predisposition to Disease , Humans , Loss of Heterozygosity , Lung Neoplasms/etiology , Mice , Mice, Nude , Neoplasm Transplantation , Papillomaviridae/physiology , Polymerase Chain Reaction , Radon , Y Chromosome/radiation effects
6.
Leukemia ; 14(12): 2166-75, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11187907

ABSTRACT

Drug resistance of leukemic blasts is correlated to event-free survival and might be predicted by mRNA expression of drug resistance-related proteins. Methotrexate (MTX) is an important component in the treatment of childhood leukemia. Mechanisms of MTX resistance include (1) decreased transport via the reduced folate carrier (RFC), (2) altered levels of target enzymes, eg dihydrofolate reductase (DHFR) and thymidylate synthase (TS), (3) decreased ratio of folylpolyglutamate synthetase (FPGS)/folylpolyglutamate hydrolase (FPGH). We designed competitive templates for each of these genes to measure mRNA expression by quantitative RT-PCR and normalized the expression to that of beta-actin. T-lineage acute lymphoblastic leukemia (T-ALL), relatively MTX resistant compared to common/preB-ALL, displayed higher mRNA levels of DHFR and TS (three- and four-fold higher, respectively; P < 0.001), while FPGS expression was lower (three-fold, P = 0.006) compared to common/preB-ALL. The ratio of (DHFR x FPGH)/(RFC x FPGS) was more discriminating between T-ALL and c/preB-ALL (eight-fold higher; P < 0.001) than either target independently. Acute myeloid leukemia (AML) cells, considered MTX resistant, expressed two-fold lower levels of FPGS mRNA compared to c/preB-ALL (P = 0.04). The ratio of FPGH/FPGS was more discriminating between AML and c/preB-ALL (four-fold higher; P = 0.001) than either target independently. For the total group of 79 leukemic samples, mRNA expression of DHFR varied 549-fold and paralleled TS mRNA expression (r = 0.80; P < 0.001). Although variations in mRNA expression resembled variations in functional activity, no direct correlations were found for RFC (58-fold variation in mRNA expression), FPGS (95-fold) and FPGH (178-fold). In conclusion, differences in mRNA expression of MTX resistance parameters between leukemic subtypes as detected by competitive RT-PCR are in line with known differences in MTX resistance.


Subject(s)
Antimetabolites, Antineoplastic/therapeutic use , Burkitt Lymphoma/metabolism , Leukemia-Lymphoma, Adult T-Cell/metabolism , Methotrexate/therapeutic use , Neoplasm Proteins/genetics , RNA, Messenger/genetics , Antimetabolites, Antineoplastic/pharmacology , Base Sequence , Burkitt Lymphoma/drug therapy , DNA Primers , Leukemia-Lymphoma, Adult T-Cell/drug therapy , Methotrexate/pharmacology , Polymerase Chain Reaction , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction
7.
Blood ; 94(9): 3121-8, 1999 Nov 01.
Article in English | MEDLINE | ID: mdl-10556198

ABSTRACT

Cellular methotrexate (MTX) resistance may cause treatment failure in childhood common/preB-acute lymphoblastic leukemia (c/preB-ALL), T-lineage ALL (T-ALL), and acute myeloid leukemia (AML). The ex vivo potency of several antifolates (MTX, trimetrexate [TMQ], GW1843U89, multitargeted antifolate [MTA], Raltitrexed, and ZD9331) was studied via in situ inhibition of thymidylate synthase (TS). After short-term exposure, relapsed c/preB-ALL (rALL, n = 21), T-ALL (n = 22), and AML (n = 22) were 3-fold, 10-fold, and 6-fold less sensitive to MTX (P

Subject(s)
Antimetabolites, Antineoplastic/pharmacology , Drug Resistance, Neoplasm , Folic Acid Antagonists/pharmacology , Folic Acid Antagonists/therapeutic use , Leukemia/drug therapy , Methotrexate/pharmacology , Antimetabolites, Antineoplastic/therapeutic use , Child , Child, Preschool , Humans , Methotrexate/therapeutic use , Quinazolines/pharmacology , Quinazolines/therapeutic use , Thiophenes/pharmacology , Thiophenes/therapeutic use , Treatment Outcome , Trimetrexate/pharmacology , Trimetrexate/therapeutic use
8.
Carcinogenesis ; 20(8): 1529-33, 1999 Aug.
Article in English | MEDLINE | ID: mdl-10426802

ABSTRACT

The cellular and molecular mechanisms of radiation-induced lung cancer are not known. In the present study, alterations of p53 in tumorigenic human papillomavirus-immortalized human bronchial epithelial (BEP2D) cells induced by a single low dose of either alpha-particles or 1 GeV/nucleon (56)Fe were analyzed by PCR-single-stranded conformation polymorphism (SSCP) coupled with sequencing analysis and immunoprecipitation assay. A total of nine primary and four secondary tumor cell lines, three of which were metastatic, together with the parental BEP2D and primary human bronchial epithelial (NHBE) cells were studied. The immunoprecipitation assay showed overexpression of mutant p53 proteins in all the tumor lines but not in NHBE and BEP2D cells. PCR-SSCP and sequencing analysis found band shifts and gene mutations in all four of the secondary tumors. A G-->T transversion in codon 139 in exon 5 that replaced Lys with Asn was detected in two tumor lines. One mutation each, involving a G-->T transversion in codon 215 in exon 6 (Ser-->lle) and a G-->A transition in codon 373 in exon 8 (Arg-->His), was identified in the remaining two secondary tumors. These results suggest that p53 alterations correlate with tumorigenesis in the BEP2D cell model and that mutations in the p53 gene may be indicative of metastatic potential.


Subject(s)
Genes, p53/radiation effects , Lung Neoplasms/genetics , Neoplasms, Radiation-Induced/genetics , Animals , Cell Line, Transformed , DNA Mutational Analysis , Epithelial Cells/pathology , Epithelial Cells/radiation effects , Humans , Lung Neoplasms/pathology , Mice , Mice, Nude , Neoplasms, Radiation-Induced/secondary , Point Mutation , Polymorphism, Single-Stranded Conformational , Tumor Cells, Cultured/drug effects
9.
Lung Cancer ; 22(1): 15-21, 1998 Oct.
Article in English | MEDLINE | ID: mdl-9869103

ABSTRACT

This study examined the effect of cigarette smoking parameters such as intensity, duration, age at initiation, and quitting on the development of different histological types of lung cancer in men. We used data from a case-control study conducted in Philadelphia between 1985 and 1987. Cases included 482 men with histologically confirmed lung cancer diagnosed in 15 selected hospitals in Philadelphia. Controls were selected from a neighborhood survey of men in Philadelphia conducted concurrently to the case recruitment. Most aspects of smoking were associated with all the major histological types of lung cancer. Number of cigarettes smoked per day was the strongest predictor of risk of developing lung cancer. Early age at initiation of smoking significantly increased the risk of small cell carcinoma (odds ratio = 3.0; 95% CI, 1.1-8.4). Quitting smoking reduced the risk of squamous cell and adenocarcinoma; however, it did not affect the risk of small cell lung cancer. The findings of this study suggest the need for greater emphasis on smoking prevention programs, especially in adolescents.


Subject(s)
Adenocarcinoma/etiology , Carcinoma, Small Cell/etiology , Carcinoma, Squamous Cell/etiology , Lung Neoplasms/etiology , Smoking/adverse effects , Adenocarcinoma/epidemiology , Adenocarcinoma/pathology , Adult , Age Factors , Aged , Aged, 80 and over , Carcinoma, Small Cell/epidemiology , Carcinoma, Small Cell/pathology , Carcinoma, Squamous Cell/epidemiology , Carcinoma, Squamous Cell/pathology , Case-Control Studies , Humans , Lung Neoplasms/epidemiology , Lung Neoplasms/pathology , Male , Middle Aged , Odds Ratio , Philadelphia/epidemiology , Risk Factors
10.
Carcinogenesis ; 19(10): 1867-71, 1998 Oct.
Article in English | MEDLINE | ID: mdl-9806171

ABSTRACT

Bronchogenic carcinomas arise from bronchial epithelial cells (BECs). Inhalation exposure of BECs to nitrosamines in cigarette smoke is an important exogenous risk factor for malignant transformation of BECs. Thus, an important endogenous risk factor is likely to be the capacity of BECs to metabolize nitrosamines. Among the cytochrome P450 enzymes capable of metabolizing nitrosamines, CYP2A6, CYP2E1 and CYP2B6 are expressed in BECs. In this study, we used quantitative RT-PCR to evaluate expression of CYP2A6 and CYP2E1 in primary human BECs from 12 non-smokers and eight smokers. CYP2A6 was expressed in 20/20 cases and quantifiable in 18/20 cases, with a mean level of 580 mRNA/10(6) beta-actin mRNA. CYP2E1 expression was observed in 9/20 cases, but in all cases it was expressed at levels below our limit of quantification (10 mRNA/10(6) beta-actin mRNA). There was significant (P < 0.05) 20-fold inter-individual variation in expression of CYP2A6. Further, the mean level of CYP2A6 among smokers (260 mRNA/10(6) beta-actin mRNA) was significantly lower than among non-smokers (740 mRNA/10(6) beta-actin mRNA). It is hypothesized that: (i) inter-individual variation in CYP2A6 gene expression may contribute to inter-individual variation in risk for bronchogenic carcinoma; (ii) smoking may reduce the level of expression of CYP2A6 in the BECs of some individuals; and (iii) CYP2A6 is more important than CYP2E1 for metabolic activation of nitrosamines in bronchial epithelial cells.


Subject(s)
Aryl Hydrocarbon Hydroxylases , Bronchi/enzymology , Cytochrome P-450 CYP2E1/genetics , Cytochrome P-450 Enzyme System/genetics , Gene Expression , Mixed Function Oxygenases/genetics , Actins/genetics , Adult , Base Sequence , Bronchi/cytology , Cytochrome P-450 CYP2A6 , DNA Primers , Epithelial Cells/enzymology , Female , Humans , Male , RNA, Messenger/genetics , Reverse Transcriptase Polymerase Chain Reaction
11.
Am J Respir Cell Mol Biol ; 19(1): 6-17, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9651175

ABSTRACT

Progress toward complete sequencing of all human genes through the Human Genome Project has already resulted in a need for methods that allow quantitative expression measurement of multiple genes simultaneously. It is increasingly recognized that relative measurement of multiple genes will provide more mechanistic information regarding cell pathophysiology than measurement of individual genes one by one or by methods that do not allow direct intergene comparison. In this study, previously described quantitative reverse transcription-polymerase chain reaction methods were modified in an effort to provide a rapid, simple method for this purpose. Internal standard competitive templates (CTs) were prepared for each gene and were combined in a single solution containing CTs for more than 40 genes at defined concentrations relative to one another. Any subsequent dilution of the CT mixture did not alter the relationship of one CT to another. Because the same CT standard solution or a dilution of it was used in all experiments, data obtained from different experiments were easily compared. The use of multiple CT mixtures with different housekeeping gene to target gene ratios provided a linear dynamic range spanning the range of expression of all genes thus far evaluated. CT stock solutions were used to simultaneously quantify the expression of 25 genes relative to beta-actin and glyceraldehyde-3-phosphate dehydrogenase in normal and malignant bronchial epithelial cells. Because the CT concentrations were known, data in the form of both absolute messenger RNA (mRNA) copy number and mRNA relative to housekeeping gene mRNA were obtained. The methods and reagents described will allow rapid, quantitative measurement of multiple genes simultaneously, using inexpensive and widely available equipment. Furthermore, the CT standard solution may be distributed to other investigators for interlaboratory standardization of experimental conditions.


Subject(s)
Bronchi/metabolism , Gene Expression , Lung Neoplasms/genetics , Polymerase Chain Reaction/methods , Actins/genetics , Actins/metabolism , Adult , Apoptosis , Bronchi/cytology , Cell Cycle , Cell Differentiation , Cells, Cultured , DNA Primers , DNA Repair , Epithelial Cells/metabolism , Female , Glyceraldehyde-3-Phosphate Dehydrogenases/genetics , Glyceraldehyde-3-Phosphate Dehydrogenases/metabolism , Humans , Lung Neoplasms/metabolism , Male , Middle Aged , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reproducibility of Results , Templates, Genetic , Tumor Cells, Cultured
12.
Am J Respir Cell Mol Biol ; 19(1): 18-24, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9651176

ABSTRACT

Recent methodological developments allow expression measurement of many genes simultaneously, thereby revealing patterns of gene expression that can be related to phenotype. We hypothesized that through the use of such methods we could identify patterns of gene expression associated with the malignant phenotype in human bronchial epithelial cells (BEC). To test this hypothesis, a recently developed quantitative reverse transcriptase polymerase chain reaction method was used to assess simultaneously expression of 15 genes mechanistically associated with cell-cycle control (c-myc, E2F-1, p21, rb, PCNA, cyclin D2, cyclin D3, cyclin E, cdc2, CDK2, CDK4, mad, max p21, max p22, and p53) in normal cell cultures from five individuals and in nine different malignant BEC lines. Relative to the mean expression levels in cultured normal cell populations, expression of c-myc, E2F-1, PCNA, cyclin E, and CDK4 messenger RNA (mRNA) were significantly increased and expression of p21 and p53 mRNA were significantly decreased in one or two, but not all three subtypes (squamous, adenocarcinoma and small cell) of carcinoma cell lines evaluated. No single cell-cycle control gene discriminated all three subtypes from normal cell populations. In contrast, the gene expression index c-myc x E2F-1/p21 separated all carcinoma cell lines from all normal cell populations initially evaluated. This malignancy index was validated in an additional three cultured normal BEC and three carcinoma cell lines, as well as three pairs of matched primary normal bronchial epithelial and primary bronchogenic carcinoma samples, and three pairs of matched primary normal lung parenchyma and primary bronchogenic carcinoma tissue. Again, the c-myc x E2F-1/ p21 index successfully discriminated all cultured and primary normal from malignant samples and thereby had a predictive value of 1 (no false positives and no false negatives). We hypothesize that because of functional mutations in cell-cycle regulatory genes (e.g., p53 and/or rb), cells lose the ability to maintain a pattern of gene expression mechanistically associated with normal, division-limited homeostatic equilibrium. Because the c-myc x E2F-1/p21 gene expression index has high specificity for malignant tissue, it will allow confirmation that there is a significant amount of tumor tissue present in small (e.g., fine-needle) biopsy specimens prior to evaluating them for expression of other genes, such as those involved in chemoresistance or radioresistance. In addition, the goal of most gene therapy efforts is to alter levels of gene expression quantitatively. This index and others derived in a similar manner may better define potential gene therapy targets as well as response of targeted genes to therapy.


Subject(s)
Bronchi/metabolism , Carcinoma, Bronchogenic/genetics , Carrier Proteins , Cell Cycle Proteins , Cyclins/genetics , DNA-Binding Proteins , Genes, myc , Lung Neoplasms/genetics , Transcription Factors/genetics , Aged , Bronchi/cytology , Bronchi/pathology , Carcinoma, Bronchogenic/pathology , Cell Cycle/genetics , Cell Transformation, Neoplastic/genetics , Cells, Cultured , Cyclin-Dependent Kinase Inhibitor p21 , E2F Transcription Factors , E2F1 Transcription Factor , Epithelial Cells/metabolism , Epithelial Cells/pathology , Female , Gene Expression , Humans , Lung Neoplasms/pathology , Male , Middle Aged , Polymerase Chain Reaction/methods , Retinoblastoma-Binding Protein 1 , Transcription Factor DP1 , Tumor Cells, Cultured
13.
Am J Respir Cell Mol Biol ; 19(1): 25-9, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9651177

ABSTRACT

Expression of the small, proline-rich protein (spr1) squamous differentiation marker was measured in five cultured normal and 12 malignant human bronchial epithelial cell (BEC) populations by quantitative reverse transcriptase polymerase chain reaction (RT-PCR). Whereas spr1 expression was quantifiable and inducible in all five cultured normal cell populations, in all 12 carcinoma cell lines evaluated it was neither quantifiable nor inducible. Primers spanning the entire spr1 coding sequence amplified full-length PCR product from genomic DNA; therefore, large deletions in the coding region were not responsible for the loss of expression measurable by RT-PCR. This is the first molecular genetic marker reported that distinguishes all normal from all carcinoma cell populations evaluated. Because the spr1 protein is a component of the crosslinked envelope that forms during the squamous differentiation process, we hypothesize that the apparent loss of spr1 gene expression disrupts mechanisms for terminal squamous differentiation in the bronchial epithelium, thereby contributing to malignant transformation.


Subject(s)
Carcinoma, Bronchogenic/genetics , Gene Expression , Lung Neoplasms/genetics , Proteins/genetics , Bronchi/cytology , Bronchi/metabolism , Bronchi/pathology , Carcinoma, Bronchogenic/pathology , Cell Transformation, Neoplastic , Cornified Envelope Proline-Rich Proteins , Epithelial Cells/metabolism , Epithelial Cells/pathology , Gene Expression Regulation , Gene Expression Regulation, Neoplastic , Humans , Lung Neoplasms/pathology , Membrane Proteins , Polymerase Chain Reaction/methods , RNA, Messenger/genetics , RNA, Messenger/metabolism , Tumor Cells, Cultured
14.
Adv Space Res ; 22(12): 1699-707, 1998.
Article in English | MEDLINE | ID: mdl-11542414

ABSTRACT

Carcinogenesis is postulated to be a progressive multistage process characterized by an increase in genomic instability and clonal selection with each mutational event endowing a selective growth advantage. Genomic instability as manifested by the amplification of specific gene fragments is common among tumor and transformed cells. In the present study, immortalized human bronchial (BEP2D) cells were irradiated with graded doses of either 1GeV/nucleon 56Fe ions or 150 keV/micrometer alpha particles. Transformed cells developed through a series of successive steps before becoming tumorigenic in nude mice. Tumorigenic cells showed neither ras mutations nor deletion in the p16 tumor suppressor gene. In contrast, they harbored mutations in the p53 gene and over-expressed cyclin D1. Genomic instability among transformed cells at various stage of the carcinogenic process was examined based on frequencies of PALA resistance. Incidence of genomic instability was highest among established tumor cell lines relative to transformed, non-tumorigenic and control cell lines. Treatment of BEP2D cells with a 4 mM dose of the aminothiol WR-1065 significantly reduced their neoplastic transforming response to 56Fe particles. This model provides an opportunity to study the cellular and molecular mechanisms involved in malignant transformation of human epithelial cells by heavy ions.


Subject(s)
Alpha Particles , Cell Transformation, Neoplastic , Heavy Ions , Iron , Animals , Antineoplastic Agents/pharmacology , Aspartic Acid/analogs & derivatives , Aspartic Acid/pharmacology , Bronchi/cytology , Bronchi/pathology , Bronchi/radiation effects , Cell Fusion , Cell Line, Transformed , Epithelial Cells/pathology , Epithelial Cells/radiation effects , Gene Amplification , Genes, Tumor Suppressor , Humans , Linear Energy Transfer , Lung Neoplasms/genetics , Lung Neoplasms/pathology , Mercaptoethylamines/pharmacology , Mice , Mice, Nude , Phosphonoacetic Acid/analogs & derivatives , Phosphonoacetic Acid/pharmacology , Radiation-Protective Agents/pharmacology , Tumor Cells, Cultured
15.
Am J Respir Cell Mol Biol ; 17(1): 114-24, 1997 Jul.
Article in English | MEDLINE | ID: mdl-9224217

ABSTRACT

Bronchial epithelial cells (BEC) are the progenitors of bronchogenic carcinomas and are exposed to polycyclic aromatic hydrocarbon (PAH) procarcinogens through inhalation of combustion products. PAH are converted to carcinogenic molecules through a combination of monoxygenation by cytochrome p450 (CYP) enzymes in the presence of NADPH oxidoreductase (OR) and hydrolysis by microsomal epoxide hydrolase (mEH). In artificial systems, the relative expression of these genes determines whether carcinogenic or noncarcinogenic species are generated during metabolism. This relationship was explored in humans by using quantitative competitive reverse transcriptase polymerase chain reaction amplification to determine the range of expression of CYP1A1, CYP1B1, mEH, and NADPH OR in BEC recovered from 10 nonsmokers and 9 smokers. CYP2B7 expression was evaluated because, although little is known of its substrate specificity, it is expressed at high levels in human lung tissue. CYP1A1 and CYP1B1 were expressed in BEC at significantly different levels (P < 0.05) in the 9 smokers at 1.4 +/- 2.3 x 10(4) and 2.4 +/- 3.2 x 10(3) molecules/10(6) beta-actin molecules (mean +/- STD), respectively, but each was measurable in only one of the 10 nonsmokers. There was significant inter-individual variation (P < 0.05) in both CYP1A1 and CYP1B1 expression among the subjects for whom sufficient data were obtained. The inducibility of human BEC CYP1A1 gene by PAH exposure was confirmed in vitro by incubating cultured immortalized human BEC with beta-naphthoflavone and observing a > 6-fold induction of CYP1A1 after 24 h. In contrast to BEC, alveolar macrophages expressed CYP1A1 at low (30-70 molecules/10(6) beta-actin molecules) to unmeasurable levels in both smokers and nonsmokers. There was no significant difference in expression of mEH, CYP2B7, or NADPH OR in smokers compared with nonsmokers. The inter-individual variation in absolute and relative expression of PAH metabolism enzymes in BEC reported here supports the hypothesis that inter-individual variation in ability to activate/inactivate inhaled PAH carcinogens accounts for at least some of the inter-individual variation in risk for bronchogenic carcinoma.


Subject(s)
Aryl Hydrocarbon Hydroxylases , Cytochrome P-450 Enzyme System/biosynthesis , Epoxide Hydrolases/biosynthesis , Lung/enzymology , NADPH Oxidases/biosynthesis , Smoking/metabolism , Adult , Bronchoscopy , Cytochrome P-450 CYP1A1/biosynthesis , Cytochrome P-450 CYP1B1 , Cytochrome P450 Family 2 , DNA Primers , Female , Humans , Male , Microsomes/enzymology , Polymerase Chain Reaction/methods , Reference Values
16.
Carcinogenesis ; 18(6): 1251-7, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9214610

ABSTRACT

To establish a cell culture model for lung carcinogenesis, independent populations of the human papillomavirus 18-immortalized human bronchial epithelial cell line BEP2D were treated with high linear energy transfer radon-simulated alpha-particles, expanded and xenotransplanted into Nu/Nu mice. Six independent cell lines were established from tumors that developed from three separate radiation treatments as follows: treatment (Tx) 1 (30 cGy--two doses), H2BT, Tx 2 (30 cGy--single dose), R30T1L, R30T2 and R30T3L, Tx 3 (30 cGy--single dose), H1ATN and H1ATBA1. Cytogenetic analysis revealed common changes in all tumor lines: loss of the Y chromosome (ch), one of three copies of ch8, one of three copies of ch14, and one of two copies of ch4p16-pter and ch11p15-pter. Analysis of polymerase chain reaction-amplified short tandem repeats of informative loci confirmed the loss of chY in all lines and loss of heterozygosity (LOH) at eight loci spanning the length of ch8 in all lines from Tx's 1 and 2. Our data support previous studies indicating the presence of tumor suppressor genes on ch8. LOH also was confirmed on ch14 at locus D14S306 in all cell lines from Tx 2 and in one of two lines from Tx 3. This region, 14q12-q13, may contain changes in one of the five known somatostatin receptor genes (SSTR1). No LOH was detected at any of the informative loci tested for on ch4 or ch11.


Subject(s)
Alpha Particles , Bronchi/physiology , Bronchi/radiation effects , Bronchial Neoplasms/genetics , Carcinoma, Bronchogenic/genetics , Lung Neoplasms/genetics , Neoplasms, Radiation-Induced/genetics , Radon/toxicity , Animals , Bronchial Neoplasms/etiology , Carcinoma, Bronchogenic/etiology , Cell Line , Cell Transformation, Viral , DNA/analysis , DNA/genetics , DNA, Neoplasm/analysis , DNA, Neoplasm/genetics , Epithelial Cells , Epithelium/radiation effects , Gene Deletion , Genes, Tumor Suppressor , Heterozygote , Humans , Karyotyping , Lung Neoplasms/etiology , Mice , Mice, Nude , Neoplasms, Radiation-Induced/etiology , Papillomaviridae , Polymerase Chain Reaction , Repetitive Sequences, Nucleic Acid
18.
Oncogene ; 13(7): 1423-30, 1996 Oct 03.
Article in English | MEDLINE | ID: mdl-8875980

ABSTRACT

Chromosome end-to-end associations seen at metaphase involve telomeres and are commonly observed in cells derived from individuals with ataxia telangiectasia and most types of human tumors. The associations may arise because of short telomeres and/or alterations of chromatin structure. There is a growing consensus that telomere length is stabilized by the activity of telomerase in immortal cells; however, it is not clear why some immortal cells display chromosome end-to-end associations. In the present study we evaluated chromosome end-to-end associations, telomere length and telomerase activity with the tumorigenic status of human bronchial epithelial cells immortalized with human papillomavirus. Oncogenic transformation was initiated using radon simulated alpha-particles and cells evaluated as primary, secondary and metastatic transformants. The fewest chromosome end associations and lowest telomerase activity were observed in the parental immortalized cells. However, increased levels of telomerase activity were detected in alpha-particle survivors while robust telomerase activity was seen in the tumorigenic cell lines. The tumorigenic cells that were telomerase positive and had the highest frequency of cells with chromosome end-to-end associations were also metastatic. No correlation was found between telomere length and the different stages of carcinogenicity.


Subject(s)
Ataxia Telangiectasia/genetics , Cell Transformation, Neoplastic/genetics , Chromosome Aberrations/genetics , Telomerase/metabolism , Telomere/genetics , Ataxia Telangiectasia/pathology , Cell Line, Transformed/virology , Cell Transformation, Neoplastic/pathology , Chromosome Aberrations/pathology , Chromosome Disorders , Chromosomes/radiation effects , Fibroblasts/pathology , G1 Phase/genetics , G2 Phase/genetics , Humans , Neoplasms, Radiation-Induced/genetics , Radon , Telomere/radiation effects , Tumor Cells, Cultured , Tumor Suppressor Protein p53/metabolism
19.
Am J Respir Cell Mol Biol ; 14(3): 262-71, 1996 Mar.
Article in English | MEDLINE | ID: mdl-8845177

ABSTRACT

Human bronchial epithelial cells (BEC), a primary defense against inhaled materials, are the progenitor cells for bronchogenic carcinomas and have important metabolic capabilities. We used reverse transcriptase-polymerase chain reaction (RT-PCR) to identify xenobiotic metabolism enzymes expressed in primary BEC and alveolar macrophages (AM) of non-smoking volunteers. Cytochromes P450 (CYP) 1A1, 1B1, 2B7, 2E1, and 4B1 and microsomal epoxide hydrolase (mEH) were expressed in BEC but not AM. CYP2F1 was expressed in BEC, but it was expressed at barely detectable levels or not at all in AM. NADPH oxidoreductase (NADPH OR), microsomal glutathione transferase (GST 12), glutathione transferase mu, phenol sulfotransferase (PST), thermolabile phenol sulfotransferase (TL PST), and the clara cell-specific gene, CC10 were expressed in both BEC and AM. CYP3A4 and glucuronosyl transferases-1 and 2 were not expressed in either BEC or AM. In contrast to primary BEC, of the genes evaluated, the immortalized human bronchial epithelial cell line BEP2D constitutively expressed only CYP1A1, CYP2E1, NADPH OR, glucuronosyl transferase 1, GST 12, GST mu, PST, TL PST, and CC10. The loss of xenobiotic metabolism enzyme gene expression in the BEP2D cell line may result from either reduced exposure to inducing agents, or loss of differentiative characteristics in culture. It is clear from the data comparing BEC and AM that there are important intertissue differences in expression of xenobiotic metabolism enzymes.


Subject(s)
Bronchi/enzymology , Gene Expression Regulation, Enzymologic/physiology , Macrophages, Alveolar/enzymology , Uteroglobin , Xenobiotics/metabolism , Base Sequence , Bronchi/cytology , Cell Line, Transformed , Cells, Cultured , Cytochrome P-450 Enzyme System/genetics , Epithelial Cells , Epithelium/metabolism , Epoxide Hydrolases/genetics , Humans , Molecular Sequence Data , NADH, NADPH Oxidoreductases/genetics , Polymerase Chain Reaction/methods , Proteins/genetics , RNA, Messenger/analysis , Transferases/genetics
20.
Am J Physiol ; 270(2 Pt 1): L173-82, 1996 Feb.
Article in English | MEDLINE | ID: mdl-8779985

ABSTRACT

The epithelial cells of the lower respiratory tract are exposed to high levels of inhaled oxygen and other oxidants. We hypothesized that lung cells would secrete the antioxidant enzyme, extracellular glutathione peroxidase (eGPx), into epithelial lining fluid (ELF). To investigate this hypothesis, we used specific immunoprecipitations of GPx enzymes from ELF, specific immunoprecipitations of 75Se metabolically labeled proteins from lung cells in culture, and in situ hybridization, Northern blot, and reverse transcription-polymerase chain reaction (RT-PCR) analyses. Fifty-seven percent of ELF GPx activity was due to eGPx and 40% was due to cellular GPx (cGPx). Primary bronchial epithelial cells (BEC), primary alveolar macrophages (AM), and two human bronchial epithelial cell lines, BEP2D and A549, synthesized both eGPx and cGPx and secreted eGPx into the medium. Freshly isolated human AM and BEC expressed eGPx mRNA, while freshly isolated rabbit type 2 pneumocytes did not. In lung tissue, eGPx mRNA was found mainly in interstitial cells of tissue surrounding airways. It is concluded that more than half of GPx activity in BAL is due to eGPx, and that BEC, AM, and interstitial cells are potential sources of pulmonary eGPx.


Subject(s)
Extracellular Space/enzymology , Glutathione Peroxidase/metabolism , Lung/enzymology , Adolescent , Adult , Animals , Base Sequence , Bronchoalveolar Lavage Fluid/chemistry , Bronchoalveolar Lavage Fluid/cytology , Cell Separation , Cells, Cultured , Epithelial Cells , Epithelium/enzymology , Glutathione Peroxidase/genetics , Humans , In Situ Hybridization , Lung/cytology , Molecular Probes/genetics , Molecular Sequence Data , RNA, Messenger/metabolism , Rabbits
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