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1.
Int J Mol Sci ; 23(17)2022 Sep 01.
Article in English | MEDLINE | ID: mdl-36077329

ABSTRACT

Aedes aegypti mosquitoes transmit several human pathogens that cause millions of deaths worldwide, mainly in Latin America. The indiscriminate use of insecticides has resulted in the development of species resistance to some such compounds. Piperidine, a natural alkaloid isolated from Piper nigrum, has been used as a hit compound due to its larvicidal activity against Aedes aegypti. In the present study, piperidine derivatives were studied through in silico methods: pharmacophoric evaluation (PharmaGist), pharmacophoric virtual screening (Pharmit), ADME/Tox prediction (Preadmet/Derek 10.0®), docking calculations (AutoDock 4.2) and molecular dynamics (MD) simulation on GROMACS-5.1.4. MP-416 and MP-073 molecules exhibiting ΔG binding (MMPBSA -265.95 ± 1.32 kJ/mol and -124.412 ± 1.08 kJ/mol, respectively) and comparable to holo (ΔG binding = -216.21 ± 0.97) and pyriproxyfen (a well-known larvicidal, ΔG binding= -435.95 ± 2.06 kJ/mol). Considering future in vivo assays, we elaborated the theoretical synthetic route and made predictions of the synthetic accessibility (SA) (SwissADME), lipophilicity and water solubility (SwissADME) of the promising compounds identified in the present study. Our in silico results show that MP-416 and MP-073 molecules could be potent insecticides against the Aedes aegypti mosquitoes.


Subject(s)
Aedes , Insecticides , Animals , Computational Biology , Humans , Insecticides/pharmacology , Juvenile Hormones , Larva , Piperidines/pharmacology , Plant Extracts/pharmacology
2.
Molecules ; 25(18)2020 Sep 12.
Article in English | MEDLINE | ID: mdl-32932669

ABSTRACT

Non-steroidal anti-inflammatory drugs are inhibitors of cyclooxygenase-2 (COX-2) that were developed in order to avoid the side effects of non-selective inhibitors of COX-1. Thus, the present study aims to identify new selective chemical entities for the COX-2 enzyme via molecular modeling approaches. The best pharmacophore model was used to identify compounds within the ZINC database. The molecular properties were determined and selected with Pearson's correlation for the construction of quantitative structure-activity relationship (QSAR) models to predict the biological activities of the compounds obtained with virtual screening. The pharmacokinetic/toxicological profiles of the compounds were determined, as well as the binding modes through molecular docking compared to commercial compounds (rofecoxib and celecoxib). The QSAR analysis showed a fit with R = 0.9617, R2 = 0.9250, standard error of estimate (SEE) = 0.2238, and F = 46.2739, with the tetra-parametric regression model. After the analysis, only three promising inhibitors were selected, Z-964, Z-627, and Z-814, with their predicted pIC50 (-log IC50) values, Z-814 = 7.9484, Z-627 = 9.3458, and Z-964 = 9.5272. All candidates inhibitors complied with Lipinski's rule of five, which predicts a good oral availability and can be used in in vitro and in vivo tests in the zebrafish model in order to confirm the obtained in silico data.


Subject(s)
Cyclooxygenase 2 Inhibitors/pharmacology , Inflammation/drug therapy , Animals , Binding Sites , Caco-2 Cells , Celecoxib/pharmacology , Dogs , Drug Evaluation, Preclinical , Humans , Inhibitory Concentration 50 , Lactones/pharmacology , Madin Darby Canine Kidney Cells , Molecular Docking Simulation , Molecular Structure , Permeability , Protein Binding , Quantitative Structure-Activity Relationship , Regression Analysis , Software , Sulfones/pharmacology
3.
J Biomol Struct Dyn ; 38(16): 4687-4709, 2020 Oct.
Article in English | MEDLINE | ID: mdl-31674282

ABSTRACT

Models validation in QSAR, pharmacophore, docking and others can ensure the accuracy and reliability of future predictions in design and selection of molecules with biological activity. In this study, pyriproxyfen was used as a pivot/template to search the database of the Maybridge Database for potential inhibitors of the enzymes acetylcholinesterase and juvenile hormone as well. The initial virtual screening based on the 3D shape resulted in 2000 molecules with Tanimoto index ranging from 0.58 to 0.88. A new reclassification was performed on the overlapping of positive and negative charges, which resulted in 100 molecules with Tanimoto's electrostatic score ranging from 0.627 to 0.87. Using parameters related to absorption, distribution, metabolism and excretion and the pivot molecule, the molecules selected in the previous stage were evaluated regarding these criteria, and 21 were then selected. The pharmacokinetic and toxicological properties were considered and for 12 molecules, the DEREK software not fired any alert of toxicity, which were thus considered satisfactory for prediction of biological activity using the Web server PASS. In the molecular docking with insect acetylcholinesterase, the Maybridge3_002654 molecule had binding affinity of -11.1 kcal/mol, whereas in human acetylcholinesterase, the Maybridge4_001571molecule show in silico affinity of -10.2 kcal/mol, and in the juvenile hormone, the molecule MCULE-8839595892 show in silico affinity value of -11.6 kcal/mol. Subsequent long-trajectory molecular dynamics studies indicated considerable stability of the novel molecules compared to the controls.AbbreviationsQSARquantitative structure-activity relationshipsPASSprediction of activity spectra for substancesCommunicated by Ramaswamy H. Sarma.


Subject(s)
Insecticides , Molecular Dynamics Simulation , Acetylcholinesterase , Humans , Juvenile Hormones , Molecular Docking Simulation , Quantitative Structure-Activity Relationship , Reproducibility of Results
4.
Molecules ; 24(16)2019 Aug 14.
Article in English | MEDLINE | ID: mdl-31416180

ABSTRACT

Leukemias are neoplasms that affect hematopoietic cells, which are developed by genetic alterations (mutations) that lead to the loss of proliferation control mechanisms (maturation and/or cell death). The α4ß1 integrin receptor is a therapeutic target for inflammation, autoimmune diseases and lymphoid tumors. This study was carried out to search through the antagonists-based virtual screening for α4ß1 receptor. Initially, seventeen (17) structures were selected (based on the inhibitory activity values, IC50) and the structure with the best value was chosen as the pivot. The pharmacophoric pattern was determined from the online PharmaGist server and resulted in a model of score value equal to 97.940 with 15 pharmacophoric characteristics that were statistically evaluated via Pearson correlations, principal component analysis (PCA) and hierarchical clustering analysis (HCA). A refined model generated four pharmacophoric hypotheses totaling 1.478 structures set of Zinc_database. After, the pharmacokinetic, toxicological and biological activity predictions were realized comparing with pivot structure that resulted in five (ZINC72088291, ZINC68842860, ZINC14365931, ZINC09588345 and ZINC91247798) structures with optimal in silico predictions. Therefore, future studies are needed to confirm antitumor potential activity of molecules selected this work with in vitro and in vivo assays.


Subject(s)
Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , Computer Simulation , Drug Screening Assays, Antitumor , Peptides/chemistry , Peptides/pharmacology , Cluster Analysis , Drug Screening Assays, Antitumor/methods , Humans , Models, Molecular , Molecular Conformation , Molecular Structure , Structure-Activity Relationship
5.
Childs Nerv Syst ; 25(5): 627-30, 2009 May.
Article in English | MEDLINE | ID: mdl-19296115

ABSTRACT

INTRODUCTION: We report a patient who suffered from brainstem injury following ventriculoperitoneal (VP) shunt placement in the fourth ventricle. DISCUSSION: A 20-year-old man with complex hydrocephalus and trapped fourth ventricle underwent a suboccipital placement of a VP shunt. Postprocedure patient developed double vision. Magnetic resonance imaging showed that the catheter was penetrating the dorsal brainstem at the level of the pontomedullary junction. Patient was referred to our Neuroendoscopic Clinic. Physical exam demonstrated pure right VI cranial nerve palsy. Patient underwent flexible endoscopic exploration of the ventricular system. Some of the endoscopic findings were severe aqueductal stenosis and brainstem injury from the catheter. Aqueductoplasty, transaqueductal approach into the fourth ventricle, and endoscopic repositioning of the catheter were some of the procedures performed. Patient recovered full neurological function. The combination of endoscopic exploration and shunt is a good alternative for patients with complex hydrocephalus. A transaqueductal approach to the fourth ventricle with flexible scope is an alternative for fourth ventricle pathology.


Subject(s)
Brain Stem/injuries , Cranial Nerve Diseases/etiology , Fourth Ventricle/surgery , Hydrocephalus/surgery , Neuroendoscopy , Ventriculoperitoneal Shunt/adverse effects , Brain Stem/pathology , Brain Stem/surgery , Cranial Nerve Diseases/complications , Diplopia/etiology , Diplopia/pathology , Fourth Ventricle/pathology , Humans , Hydrocephalus/pathology , Magnetic Resonance Imaging , Male , Neuroendoscopy/methods , Neurosurgical Procedures/methods , Treatment Outcome , Ventriculoperitoneal Shunt/methods , Young Adult
6.
Vet Parasitol ; 118(1-2): 165-8, 2003 Dec 01.
Article in English | MEDLINE | ID: mdl-14651886

ABSTRACT

The larvicidal effects of 11 anthelmintics, 7 pesticides and 4 disinfectants were evaluated with infective larvae of Strongyloides papillosus (SPL) and Strongyloides venezuelensis (SVZ). The lethal concentrations against SPL and SVZ were found to be similar. Three chemicals (dichlorvos, levamisole and trichlorfon) showed highest larvicidal effects. The 50% lethal concentration (LC(50)) values for the three compounds against SPL larvae were 0.08, 0.24, and 0.59 ppm, respectively.


Subject(s)
Anthelmintics/pharmacology , Disinfectants/pharmacology , Feces/parasitology , Pesticides/pharmacology , Strongyloides/drug effects , Animals , Cattle , Cattle Diseases/prevention & control , Larva/drug effects , Larva/growth & development , Strongyloides/growth & development , Strongyloidiasis/prevention & control , Strongyloidiasis/veterinary
7.
J Virol ; 74(22): 10623-30, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11044106

ABSTRACT

RNA replicon particles derived from a vaccine strain of Venezuelan equine encephalitis virus (VEE) were used as a vector for expression of the major envelope proteins (G(L) and M) of equine arteritis virus (EAV), both individually and in heterodimer form (G(L)/M). Open reading frame 5 (ORF5) encodes the G(L) protein, which expresses the known neutralizing determinants of EAV (U. B. R. Balasuriya, J. F. Patton, P. V. Rossitto, P. J. Timoney, W. H. McCollum, and N. J. MacLachlan, Virology 232:114-128, 1997). ORF5 and ORF6 (which encodes the M protein) of EAV were cloned into two different VEE replicon vectors that contained either one or two 26S subgenomic mRNA promoters. These replicon RNAs were packaged into VEE replicon particles by VEE capsid protein and glycoproteins supplied in trans in cells that were coelectroporated with replicon and helper RNAs. The immunogenicity of individual replicon particle preparations (pVR21-G(L), pVR21-M, and pVR100-G(L)/M) in BALB/c mice was determined. All mice developed antibodies against the recombinant proteins with which they were immunized, but only the mice inoculated with replicon particles expressing the G(L)/M heterodimer developed antibodies that neutralize EAV. The data further confirmed that authentic posttranslational modification and conformational maturation of the recombinant G(L) protein occur only in the presence of the M protein and that this interaction is necessary for induction of neutralizing antibodies.


Subject(s)
Antibodies, Viral/blood , Encephalitis Virus, Venezuelan Equine/genetics , Equartevirus/metabolism , Genetic Vectors , Replicon , Viral Envelope Proteins/metabolism , Animals , Cell Line , Dimerization , Encephalitis Virus, Venezuelan Equine/immunology , Equartevirus/genetics , Immunization , Mice , Mice, Inbred BALB C , Neutralization Tests , Recombination, Genetic , Viral Envelope Proteins/chemistry , Viral Envelope Proteins/genetics , Viral Envelope Proteins/immunology , Viral Vaccines/administration & dosage , Viral Vaccines/immunology , Virion
8.
Surg Technol Int ; 7: 317-20, 1998.
Article in English | MEDLINE | ID: mdl-12721997

ABSTRACT

The morbidity and mortality associated with transurethral resection of the prostate (TURP), as therapy for benign prostatic hyperplasia (BPH), is the impetus for the urological community's search for alternative medical and surgical treatments for BPH. Interstitial Laser Coagulation of the Prostate (ILC) is a minimally invasive procedure usually performed to relieve symptomatic BPH, that is accomplished by directing laser energy into the gland via an implanted optical fiber using standard cystoscopic techniques. Treatment of adenomatous tissue with ILC reduces the size of the prostate and disrupts alpha-adrenergic nerve fibers.

9.
J Pediatr ; 123(3): 415-8, 1993 Sep.
Article in English | MEDLINE | ID: mdl-8355118

ABSTRACT

To determine how often inborn errors of metabolism may cause unexplained apnea or recurrent apparent life-threatening events in infants, we retrospectively reviewed the records of 166 infants who were referred for apnea evaluation. A metabolic disorder was identified in 7 infants (4.2%), all of whom had recurrent apparent life-threatening events.


Subject(s)
Apnea/etiology , Metabolism, Inborn Errors/physiopathology , Apnea/mortality , Humans , Infant , Infant, Newborn , Metabolism, Inborn Errors/diagnosis , Metabolism, Inborn Errors/mortality , Recurrence , Retrospective Studies
10.
J Pediatr ; 122(5 Pt 1): 715-8, 1993 May.
Article in English | MEDLINE | ID: mdl-8496748

ABSTRACT

Disorders of fatty acid beta-oxidation have been suggested as playing a significant role in the sudden infant death syndrome (SIDS). To elucidate the role of medium-chain acyl-coenzyme A dehydrogenase (MCAD) deficiency in SIDS, we identified all cases of SIDS occurring in Los Angeles County between January 1986 through December 1991. A total of 1304 SIDS deaths were identified; tissue samples were collected in 1236 cases (94.8%). Extraction of DNA was successful in 1224 tissue samples (93.9%), which were examined for the presence of the G985 mutation, identified as occurring in more than 88% of affected cases of MCAD deficiency. Three heterozygotes and no homozygotes were identified; this incidence does not differ from that reported in the general population. Review of the pathologic specimens from the identified heterozygotes and from 18 ethnic-, age-, and sex-matched control subjects revealed significant fatty infiltration of all organs examined in one of the three heterozygotes and in none of the control subjects. We conclude that MCAD deficiency does not play a significant role in the causation of SIDS.


Subject(s)
Fatty Acid Desaturases/deficiency , Sudden Infant Death/etiology , Acyl-CoA Dehydrogenase , DNA/analysis , Fatty Acid Desaturases/genetics , Female , Humans , Infant , Male , Mutation , Polymerase Chain Reaction , Sudden Infant Death/blood , Sudden Infant Death/genetics
11.
Vet Parasitol ; 46(1-4): 313-24, 1993 Feb.
Article in English | MEDLINE | ID: mdl-8484223

ABSTRACT

Epidemiologic events in the life cycle of Ostertagia ostertagi are best known in the weaner-yearling phase of cattle development throughout the concentrated cattle-rising areas of the world. Animal and pasture management demands placed on this age class are greater than for suckling calves and adult stock in either beef or dairy breeds. This fact alone would likely account for a higher prevalence of clinical and subclinical disease in weaner-yearlings. Additionally, the developing immune response provides relatively early protection against intestinal genera such as Cooperia and Oesophagostomum, but is delayed against Ostertagia ostertagi and Trichostrongylus axei. Both Type I and Type II disease may occur within the weaner-yearling stage. Factors affecting population changes of Ostertagia ostertagi have been described as extrinsic, i.e. weather-climate and grazing management, and intrinsic or host factors, i.e. age, sex, immune status, heredity and reproductive state. Immune status, particularly in weaner-yearlings, may be of primary importance, as affected by host and extrinsic factors. With slow development of protective immunity against Ostertagia ostertagi in calves, the possible role of immunity in both induction of inhibition and larval maturation, the potential immunopathologic involvement in pathogenesis of Type II disease, hypersensitivity to larval intake in resistant adult cows, and the reported delay of a protective response following anthelmintic prophylaxis in younger cattle, the immune response may have profound influence on epidemiologic variation through age classes. Although continual epidemiological observations from birth to early adulthood in the same cattle have not been undertaken, some notable studies in the UK, the Netherlands, and Denmark have closely examined epidemiological events through first and second grazing seasons.


Subject(s)
Cattle Diseases/epidemiology , Cattle/growth & development , Cattle/parasitology , Ostertagiasis/veterinary , Animals , Australia/epidemiology , Canada/epidemiology , Climate , Europe/epidemiology , New Zealand/epidemiology , Ostertagiasis/epidemiology , South America/epidemiology , United States/epidemiology
16.
J Pediatr ; 95(4): 523-9, 1979 Oct.
Article in English | MEDLINE | ID: mdl-480026

ABSTRACT

Two patients with systemic lupus erythematosus, including one with neuropathologic findings, had recurrent multifocal neurologic dysfunction and hyperlipoproteinemia. The lipoprotein disturbances were complex and variable over time. Deficient lipoprotein lipase was found in both patients and appeared to be related temporally to neurologic deterioration. One of these patients had neurologic disease and lipoprotein abnormalities 2 1/2 years before SLE could be documented serologically. These studies suggest that lipoprotein lipase deficiency may be a marker for the endothelial disorder causing cerebral vasculopathy in SLE.


Subject(s)
Central Nervous System Diseases/etiology , Hyperlipoproteinemias/etiology , Lupus Erythematosus, Systemic/complications , Adolescent , Cerebral Arteries/pathology , Cerebral Infarction/etiology , Cerebral Infarction/pathology , Child , Child, Preschool , Cholesterol/blood , Female , Heparin/pharmacology , Humans , Infarction/etiology , Infarction/pathology , Lipolysis/drug effects , Lupus Erythematosus, Systemic/pathology , Spinal Cord Diseases/etiology , Spinal Cord Diseases/pathology , Triglycerides/blood
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