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1.
Data Brief ; 42: 108050, 2022 Jun.
Article in English | MEDLINE | ID: mdl-35372651

ABSTRACT

We present data collected for the research article "Advances in Spiral fMRI: A High-resolution Study with Single-shot Acquisition" (Kasper et al. 2022). All data was acquired on a 7T ultra-high field MR system (Philips Achieva), equipped with a concurrent magnetic field monitoring setup based on 16 NMR probes. For task-based fMRI, a visual quarterfield stimulation paradigm was employed, alongside physiological monitoring via peripheral recordings. This data collection contains different datasets pertaining to different purposes: (1) Measured magnetic field dynamics (k0, spiral k-space trajectories, 2nd order spherical harmonics, concomitant fields) during ultra-high field fMRI sessions from six subjects, as well as concurrent temperature curves of the gradient coil, to explore MR system and subject-induced variability of field fluctuations and assess the impact of potential correction methods. (2) MR Raw Data, i.e., coil and concurrent encoding magnetic field (trajectory) data, of a single subject, as well as nominal spiral gradient waveforms, precomputed B0 and coil sensitivity maps, to enable testing of alternative image reconstruction approaches for spiral fMRI data. (3) Reconstructed image time series of the same subject alongside behavioral and physiological logfiles, to reproduce the fMRI preprocessing and analysis, as well as figures presented in the research article related to this article, using the published analysis code repository. All data is provided in standardized formats for the respective research area. In particular, ISMRMRD (HDF5) is used to store raw coil data and spiral trajectories, as well as measured field dynamics. Likewise, the NIfTI format is used for all imaging data (anatomical MRI and spiral fMRI, B0 and coil sensitivity maps).

2.
Magn Reson Med ; 87(1): 272-280, 2022 01.
Article in English | MEDLINE | ID: mdl-34398985

ABSTRACT

PURPOSE: The aim of this work is the reconciliation of high spatial and temporal resolution for MRI. For this purpose, a novel sampling strategy for 3D encoding is proposed, which provides flexible k-space segmentation along with uniform sampling density and benign filtering effects related to signal decay. METHODS: For time-critical MRI applications such as functional MRI (fMRI), 3D k-space is usually sampled by stacking together 2D trajectories such as echo planar imaging (EPI) or spiral readouts, where each shot covers one k-space plane. For very high temporal and medium to low spatial resolution, tilted hexagonal sampling (T-Hex) was recently proposed, which allows the acquisition of a larger k-space volume per excitation than can be covered with a planar readout. Here, T-Hex is described in a modified version where it instead acquires a smaller k-space volume per shot for use with medium temporal and high spatial resolution. RESULTS: Mono-planar T-Hex sampling provides flexibility in the choice of speed, signal-to-noise ratio (SNR), and contrast for rapid MRI acquisitions. For use with a conventional gradient system, it offers the greatest benefit in a regime of high in-plane resolution <1 mm. The sampling scheme is combined with spirals for high sampling speed as well as with more conventional EPI trajectories. CONCLUSION: Mono-planar T-Hex sampling combines fast 3D encoding with SNR efficiency and favorable depiction characteristics regarding noise amplification and filtering effects from T2∗ decay, thereby providing flexibility in the choice of imaging parameters. It is attractive both for high-resolution time series such as fMRI and for applications that require rapid anatomical imaging.


Subject(s)
Brain , Imaging, Three-Dimensional , Brain/diagnostic imaging , Echo-Planar Imaging , Magnetic Resonance Imaging , Signal-To-Noise Ratio
3.
Neuroimage ; 246: 118738, 2022 02 01.
Article in English | MEDLINE | ID: mdl-34800666

ABSTRACT

Spiral fMRI has been put forward as a viable alternative to rectilinear echo-planar imaging, in particular due to its enhanced average k-space speed and thus high acquisition efficiency. This renders spirals attractive for contemporary fMRI applications that require high spatiotemporal resolution, such as laminar or columnar fMRI. However, in practice, spiral fMRI is typically hampered by its reduced robustness and ensuing blurring artifacts, which arise from imperfections in both static and dynamic magnetic fields. Recently, these limitations have been overcome by the concerted application of an expanded signal model that accounts for such field imperfections, and its inversion by iterative image reconstruction. In the challenging ultra-high field environment of 7 Tesla, where field inhomogeneity effects are aggravated, both multi-shot and single-shot 2D spiral imaging at sub-millimeter resolution was demonstrated with high depiction quality and anatomical congruency. In this work, we further these advances towards a time series application of spiral readouts, namely, single-shot spiral BOLD fMRI at 0.8 mm in-plane resolution. We demonstrate that high-resolution spiral fMRI at 7 T is not only feasible, but delivers both excellent image quality, BOLD sensitivity, and spatial specificity of the activation maps, with little artifactual blurring. Furthermore, we show the versatility of the approach with a combined in/out spiral readout at a more typical resolution (1.5 mm), where the high acquisition efficiency allows to acquire two images per shot for improved sensitivity by echo combination.


Subject(s)
Brain/diagnostic imaging , Brain/physiology , Functional Neuroimaging/methods , Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Adult , Feasibility Studies , Female , Humans , Male , Young Adult
4.
Magn Reson Med ; 87(5): 2224-2238, 2022 05.
Article in English | MEDLINE | ID: mdl-34932233

ABSTRACT

PURPOSE: Many aspects and imperfections of gradient dynamics in MRI have been successfully captured by linear time-invariant (LTI) models. Changes in gradient behavior due to heating, however, violate time invariance. The goal of this work is to study such changes at the level of transfer functions and model them by thermal extension of the LTI framework. METHODS: To study the impact of gradient heating on transfer functions, a clinical MR system was heated using a range of high-amplitude DC and AC waveforms, each followed by measuring transfer functions in rapid succession while the system cooled down. Simultaneously, gradient temperature was monitored with an array of temperature sensors positioned according to initial infrared recordings of the gradient tube. The relation between temperatures and transfer functions is cast into local and global linear models. The models are analysed in terms of self-consistency, conditioning, and prediction performance. RESULTS: Pronounced thermal effects are observed in the time resolved transfer functions, largely attributable to in-coil eddy currents and mechanical resonances. Thermal modeling is found to capture these effects well. The keys to good model performance are well-placed temperature sensors and suitable training data. CONCLUSION: Heating changes gradient response, violating time invariance. The utility of LTI modeling can nevertheless be recovered by a linear thermal extension, relying on temperature sensing and adequate one-time training.


Subject(s)
Magnetic Resonance Imaging , Linear Models , Phantoms, Imaging
5.
Neuroimage ; 245: 118674, 2021 12 15.
Article in English | MEDLINE | ID: mdl-34718138

ABSTRACT

Spiral imaging is very well suited for functional MRI, however its use has been limited by the fact that artifacts caused by gradient imperfections and B0 inhomogeneity are more difficult to correct compared to EPI. Effective correction requires accurate knowledge of the traversed k-space trajectory. With the goal of making spiral fMRI more accessible, we have evaluated image reconstruction using trajectories predicted by the gradient impulse response function (GIRF), which can be determined in a one-time calibration step. GIRF-predicted reconstruction was tested for high-resolution (0.8 mm) fMRI at 7T. Image quality and functional results of the reconstructions using GIRF-prediction were compared to reconstructions using the nominal trajectory and concurrent field monitoring. The reconstructions using nominal spiral trajectories contain substantial artifacts and the activation maps contain misplaced activation. Image artifacts are substantially reduced when using the GIRF-predicted reconstruction, and the activation maps for the GIRF-predicted and monitored reconstructions largely overlap. The GIRF reconstruction provides a large increase in the spatial specificity of the activation compared to the nominal reconstruction. The GIRF-reconstruction generates image quality and fMRI results similar to using a concurrently monitored trajectory. The presented approach does not prolong or complicate the fMRI acquisition. Using GIRF-predicted trajectories has the potential to enable high-quality spiral fMRI in situations where concurrent trajectory monitoring is not available.


Subject(s)
Magnetic Resonance Imaging/methods , Algorithms , Artifacts , Brain Mapping , Calibration , Feasibility Studies , Humans , Image Enhancement/methods , Image Interpretation, Computer-Assisted/methods , Image Processing, Computer-Assisted/methods , Phantoms, Imaging
6.
Magn Reson Med ; 85(5): 2507-2523, 2021 05.
Article in English | MEDLINE | ID: mdl-33270941

ABSTRACT

PURPOSE: The purpose of this work is to devise and demonstrate an encoding strategy for 3D MRI that reconciles high speed with flexible segmentation, uniform k-space density, and benign T2∗ effects. METHODS: Fast sampling of a 3D k-space is typically accomplished by 2D readouts per shot using EPI trains or spiral readouts. Tilted hexagonal (T-Hex) sampling is a way of acquiring more k-space volume per excitation while maintaining uniform sampling density and a smooth T2∗ filter. The k-space volume covered per shot is controlled by the tilting angle. Image reconstruction is performed with a 3D extension of the iterative SENSE approach, incorporating actual field dynamics and static off-resonance. T-Hex imaging is compared with established 3D schemes in terms of speed and noise performance. RESULTS: Tilted hexagonal acquisition is found to achieve greater imaging speed than known alternatives, particularly in combination with spiral trajectories. The interplay of the proposed 3D trajectories, array detection, and off-resonance is successfully addressed by iterative inversion of the full signal model. Enhanced coverage per shot is of greatest utility for high speed in an intermediate resolution regime of 1 to 4 mm. T-Hex EPI combines the benefits of extended coverage per shot with increased robustness against off-resonance effects. CONCLUSION: Sampling of tilted hexagonal grids is a feasible means of gaining 3D imaging speed with near-optimal SNR efficiency and benign depiction properties. It is a particularly promising technique for time-resolved applications such as fMRI.


Subject(s)
Image Processing, Computer-Assisted , Imaging, Three-Dimensional , Algorithms , Brain/diagnostic imaging , Computer Systems , Magnetic Resonance Imaging
7.
Magn Reson Med ; 85(4): 1924-1937, 2021 04.
Article in English | MEDLINE | ID: mdl-33280160

ABSTRACT

PURPOSE: Spiral readouts combine several favorable properties that promise superior net sensitivity for diffusion imaging. The purpose of this study is to verify the signal-to-noise ratio (SNR) benefit of spiral acquisition in comparison with current echo-planar imaging (EPI) schemes. METHODS: Diffusion-weighted in vivo brain data from three subjects were acquired with a single-shot spiral sequence and several variants of single-shot EPI, including full-Fourier and partial-Fourier readouts as well as different diffusion-encoding schemes. Image reconstruction was based on an expanded signal model including field dynamics obtained by concurrent field monitoring. The effective resolution of each sequence was matched to that of full-Fourier EPI with 1 mm nominal resolution. SNR maps were generated by determining the noise statistics of the raw data and analyzing the propagation of equivalent synthetic noise through image reconstruction. Using the same approach, maps of noise amplification due to parallel imaging (g-factor) were calculated for different acceleration factors. RESULTS: Relative to full-Fourier EPI at b = 0 s/mm2 , spiral acquisition yielded SNR gains of 42-88% and 40-89% in white and gray matter, respectively, depending on the diffusion-encoding scheme. Relative to partial-Fourier EPI, the gains were 36-44% and 34-42%. Spiral g-factor maps exhibited less spatial variation and lower maxima than their EPI counterparts. CONCLUSION: Spiral readouts achieve significant SNR gains in the order of 40-80% over EPI in diffusion imaging at 3T. Combining systematic effects of shorter echo time, readout efficiency, and favorable g-factor behavior, similar benefits are expected across clinical and neurosciences uses of diffusion imaging.


Subject(s)
Diffusion Magnetic Resonance Imaging , Echo-Planar Imaging , Brain/diagnostic imaging , Humans , Image Processing, Computer-Assisted , Signal-To-Noise Ratio
8.
Magn Reson Med ; 84(6): 3117-3127, 2020 12.
Article in English | MEDLINE | ID: mdl-32573807

ABSTRACT

PURPOSE: Diffusion weighted imaging (DWI) is commonly limited by low signal-to-noise ratio (SNR) as well as motion artifacts. To address this limitation, a method that allows to maximize the achievable signal yield and increase the resolution in motion robust single-shot DWI is presented. METHODS: DWI was performed on a 3T scanner equipped with a recently developed gradient insert (gradient strength: 200 mT/m, slew rate: 600 T/m/s). To further shorten the echo time, Stejskal-Tanner diffusion encoding with a single-shot spiral readout was implemented. To allow non-Cartesian image reconstruction using such strong and fast gradients, the characterization of eddy current and concomitant field effects was performed based on field-camera measurements. RESULTS: An echo time of only 19 ms was achieved for a b-factor of 1000 s/mm2 . An in-plane resolution of 0.68 mm was encoded by a single-shot spiral readout of 40.5 ms using 3-fold undersampling. The resulting images did not suffer from off-resonance artifacts and T 2 ∗ blurring that are common to single-shot images acquired with regular gradient systems. CONCLUSION: Spiral diffusion imaging using a head gradient system, together with an accurate characterization of the encoding process allows for a substantial reduction of the echo time, and improves the achievable resolution in motion-insensitive single-shot DWI.


Subject(s)
Brain , Echo-Planar Imaging , Artifacts , Brain/diagnostic imaging , Diffusion Magnetic Resonance Imaging , Image Processing, Computer-Assisted
9.
Magn Reson Med ; 84(2): 751-761, 2020 08.
Article in English | MEDLINE | ID: mdl-31961966

ABSTRACT

PURPOSE: To demonstrate the utility of a high-performance gradient insert for ultrafast MRI of the human head. METHODS: EPI was used for the first time with a readout gradient amplitude of 100 mT/m, 1200 T/m/s slew rate, and nearly 1 MHz signal bandwidth for human head scanning. To avoid artefacts due to eddy currents, the magnetic field was dynamically monitored with NMR probes at multiple points, modeled by solid harmonics up to fifth order, and included in the image reconstruction. An approximation of a negligible intra-echo effect of the eddy currents was made to accelerate the high-order reconstruction. The field monitoring-based approach was compared with a recently proposed phase error estimation from separate reconstructions of even and odd echoes. RESULTS: Images obtained with the gradient insert have significantly lower distortions than it is the case with the whole body 30 mT/m, 200 T/m/s gradients of the same system. However, eddy currents of high spatial order must be properly characterized and corrected for in order to avoid a persistent 2D Nyquist ghost. Multi-position monitoring proves to be a robust method to measure the eddy currents and allows higher undersampling rates than the image-based approach. The proposed approximation of the eddy currents effect allows a significant acceleration of the high-order reconstruction by a separate processing of each spatial dimension. CONCLUSION: Strong gradients with adequate switching rates are highly beneficial for the quality of EPI provided that robust measures are taken to include the contribution of eddy currents to the image encoding.


Subject(s)
Artifacts , Echo-Planar Imaging , Brain/diagnostic imaging , Humans , Image Processing, Computer-Assisted , Magnetic Fields , Magnetic Resonance Imaging , Phantoms, Imaging
10.
IEEE Trans Med Imaging ; 39(3): 806-815, 2020 03.
Article in English | MEDLINE | ID: mdl-31425067

ABSTRACT

MRI gradient systems are required to generate magnetic field gradient waveforms with very high fidelity. This is commonly implemented by gradient system calibration and pre-emphasis. However, a number of mechanisms, particularly thermal changes, cause variation in the gradient response over time, which cannot be addressed by calibration approaches. To overcome this limitation, we present a novel method termed gradient response harvesting, where the gradient response is continuously characterized during the course of a normal MR sequence. Snippets of field measurements are repeatedly acquired during an MR sequence, and from these multiple field measurements and the known nominal MR sequence gradients, the gradient response and gradient/field offsets are calculated. The calculation is implemented in a model-based and a model-free variant. The method is demonstrated for EPI with high gradient duty-cycle, where the continuous gradient characterization is used to obtain k-space trajectory estimates that are employed in the subsequent image reconstruction. During the course of the MR sequence, changes in both the envelope and the phase of the gradient response functions were observed, including shifts of mechanical resonances. The gradient response changes were also reflected in the calculated uninterrupted gradient waveforms and thus in the k-space trajectories. Using the updated encoding information in the image reconstruction removed ghosting artifacts, that otherwise impaired the image quality. We introduced the concept of gradient response harvesting and demonstrated its feasibility. The obtained gradient response functions may be used for quality assurance/preventive maintenance, real-time adaptation of gradient pre-emphasis or to calculate uninterrupted gradient field evolutions.


Subject(s)
Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Artifacts , Humans , Magnetic Fields
11.
Magn Reson Med ; 83(6): 2173-2184, 2020 06.
Article in English | MEDLINE | ID: mdl-31840300

ABSTRACT

PURPOSE: In diffusion MRI, the actual b-value played out on the scanner may deviate from the nominal value due to magnetic field imperfections. A simple image-based correction method for this problem is presented. METHODS: The apparent diffusion constant (ADC) of a water phantom was measured voxel-wise along 64 diffusion directions at b = 1000 s/mm2 . The true diffusion constant of water was estimated, considering the phantom temperature. A voxel-wise correction factor, providing an effective b-value including any magnetic field deviations, was determined for each diffusion direction by relating the measured ADC to the true diffusion constant. To test the method, the measured b-value map was used to calculate the corrected voxel-wise ADC for additionally acquired diffusion data sets on the same water phantom and data sets acquired on a small water phantom at three different positions. Diffusion tensor was estimated by applying the measured b-value map to phantom and in vivo data sets. RESULTS: The b-value-corrected ADC maps of the phantom showed the expected spatial uniformity as well as a marked improvement in consistency across diffusion directions. The b-value correction for the brain data resulted in a 5.8% and 5.5% decrease in mean diffusivity and angular differences of the primary diffusion direction of 2.71° and 0.73° inside gray and white matter, respectively. CONCLUSION: The actual b-value deviates significantly from its nominal setting, leading to a spatially variable error in the common diffusion outcome measures. The suggested method measures and corrects these artifacts.


Subject(s)
Artifacts , Diffusion Magnetic Resonance Imaging , Diffusion , Phantoms, Imaging , Reproducibility of Results
12.
Magn Reson Med ; 80(5): 1836-1846, 2018 11.
Article in English | MEDLINE | ID: mdl-29575161

ABSTRACT

PURPOSE: The purpose of this work is to explore the feasibility and performance of single-shot spiral MRI at 7 T, using an expanded signal model for reconstruction. METHODS: Gradient-echo brain imaging is performed on a 7 T system using high-resolution single-shot spiral readouts and half-shot spirals that perform dual-image acquisition after a single excitation. Image reconstruction is based on an expanded signal model including the encoding effects of coil sensitivity, static off-resonance, and magnetic field dynamics. The latter are recorded concurrently with image acquisition, using NMR field probes. The resulting image resolution is assessed by point spread function analysis. RESULTS: Single-shot spiral imaging is achieved at a nominal resolution of 0.8 mm, using spiral-out readouts of 53-ms duration. High depiction fidelity is achieved without conspicuous blurring or distortion. Effective resolutions are assessed as 0.8, 0.94, and 0.98 mm in CSF, gray matter and white matter, respectively. High image quality is also achieved with half-shot acquisition yielding image pairs at 1.5-mm resolution. CONCLUSION: Use of an expanded signal model enables single-shot spiral imaging at 7 T with unprecedented image quality. Single-shot and half-shot spiral readouts deploy the sensitivity benefit of high field for rapid high-resolution imaging, particularly for functional MRI and arterial spin labeling.


Subject(s)
Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Algorithms , Brain/diagnostic imaging , Humans
13.
Magn Reson Med ; 79(4): 2036-2045, 2018 04.
Article in English | MEDLINE | ID: mdl-28856717

ABSTRACT

PURPOSE: MRI of tissues with short coherence lifetimes T2 or T2* can be performed efficiently using zero echo time (ZTE) techniques such as algebraic ZTE, pointwise encoding time reduction with radial acquisition (PETRA), and water- and fat-suppressed proton projection MRI (WASPI). They share the principal challenge of recovering data in central k-space missed due to an initial radiofrequency dead time. The purpose of this study was to compare the three techniques directly, with a particular focus on their behavior in the presence of ultra-short-lived spins. METHODS: The most direct comparison was enabled by aligning acquisition and reconstruction strategies of the three techniques. Image quality and short- T2* performance were investigated using point spread functions, 3D simulations, and imaging of phantom and bone samples with short (<1 ms) and ultra-short (<100 µs) T2*. RESULTS: Algebraic ZTE offers favorable properties but is limited to k-space gaps up to approximately three Nyquist dwells. At larger gaps, PETRA enables robust imaging with little compromise in image quality, whereas WASPI may be prone to artifacts from ultra-short T2* species. CONCLUSION: For small k-space gaps (<4 dwells) and T2* much larger than the dead time, all techniques enable artifact-free short- T2* MRI. However, if these requirements are not fulfilled careful consideration is needed and PETRA will generally achieve better image quality. Magn Reson Med 79:2036-2045, 2018. © 2017 International Society for Magnetic Resonance in Medicine.


Subject(s)
Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging , Algorithms , Animals , Artifacts , Bone and Bones/diagnostic imaging , Cattle , Computer Simulation , Humans , Image Interpretation, Computer-Assisted , Imaging, Three-Dimensional , Models, Theoretical , Phantoms, Imaging , Polymethyl Methacrylate/chemistry , Protons , Radio Waves , Tibia/diagnostic imaging
14.
IEEE Trans Med Imaging ; 37(2): 408-416, 2018 02.
Article in English | MEDLINE | ID: mdl-28910759

ABSTRACT

For magnetic resonance imaging of tissues with very short transverse relaxation times, radio-frequency excitation must be immediately followed by data acquisition with fast spatial encoding. In zero-echo-time (ZTE) imaging, excitation is performed while the readout gradient is already on, causing data loss due to an initial dead time. One major dead time contribution is the settling time of the filters involved in signal down-conversion. In this paper, a multi-rate acquisition scheme is proposed to minimize dead time due to filtering. Short filters and high output bandwidth are used initially to minimize settling time. With increasing time since the signal onset, longer filters with better frequency selectivity enable stronger signal decimation. In this way, significant dead time reduction is accomplished at only a slight increase in the overall amount of output data. Multi-rate acquisition was implemented with a two-stage filter cascade in a digital receiver based on a field-programmable gate array. In ZTE imaging in a phantom and in vivo, dead time reduction by multi-rate acquisition is shown to improve image quality and expand the feasible bandwidth while increasing the amount of data collected by only a few percent.


Subject(s)
Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Humans , Phantoms, Imaging , Radio Waves
15.
Magn Reson Med ; 79(4): 2046-2056, 2018 04.
Article in English | MEDLINE | ID: mdl-28840611

ABSTRACT

PURPOSE: To develop a method of tracking active NMR markers that requires no alterations of common imaging sequences and can be used for prospective motion correction (PMC) in brain MRI. METHODS: Localization of NMR markers is achieved by acquiring short signal snippets in rapid succession and evaluating them jointly. To spatially encode the markers, snippets are timed such that signal phase is accrued during sequence intervals with suitably diverse gradient actuation. For motion tracking and PMC in brain imaging, the markers are mounted on a lightweight headset. PMC is then demonstrated with high-resolution T2 *- and T1 -weighted imaging sequences in the presence of instructed as well as residual unintentional head motion. RESULTS: With both unaltered sequences, motion tracking was achieved with precisions on the order of 10 µm and 0.01° and temporal resolution of 48 and 39 ms, respectively. On this basis, PMC improved image quality significantly throughout. CONCLUSION: The proposed approach permits high-precision motion tracking and PMC with standard imaging sequences. It does so without altering sequence design and thus overcomes a key hindrance to routine motion tracking with NMR markers. Magn Reson Med 79:2046-2057, 2018. © 2017 International Society for Magnetic Resonance in Medicine.


Subject(s)
Brain/diagnostic imaging , Head/diagnostic imaging , Magnetic Resonance Imaging , Magnetic Resonance Spectroscopy , Calibration , Equipment Design , Healthy Volunteers , Humans , Image Processing, Computer-Assisted , Motion , Phantoms, Imaging , Signal Processing, Computer-Assisted , Signal-To-Noise Ratio
16.
Neuroimage ; 168: 88-100, 2018 03.
Article in English | MEDLINE | ID: mdl-28774650

ABSTRACT

We report the deployment of spiral acquisition for high-resolution structural imaging at 7T. Long spiral readouts are rendered manageable by an expanded signal model including static off-resonance and B0 dynamics along with k-space trajectories and coil sensitivity maps. Image reconstruction is accomplished by inversion of the signal model using an extension of the iterative non-Cartesian SENSE algorithm. Spiral readouts up to 25 ms are shown to permit whole-brain 2D imaging at 0.5 mm in-plane resolution in less than a minute. A range of options is explored, including proton-density and T2* contrast, acceleration by parallel imaging, different readout orientations, and the extraction of phase images. Results are shown to exhibit competitive image quality along with high geometric consistency.


Subject(s)
Brain/diagnostic imaging , Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Adult , Brain/anatomy & histology , Female , Humans , Male , Young Adult
17.
Magn Reson Med ; 79(6): 3256-3266, 2018 06.
Article in English | MEDLINE | ID: mdl-28983969

ABSTRACT

PURPOSE: The goal of this study was to devise a gradient system for MRI in humans that reconciles cutting-edge gradient strength with rapid switching and brings up the duty cycle to 100% at full continuous amplitude. Aiming to advance neuroimaging and short-T2 techniques, the hardware design focused on the head and the extremities as target anatomies. METHODS: A boundary element method with minimization of power dissipation and stored magnetic energy was used to design anatomy-targeted gradient coils with maximally relaxed geometry constraints. The design relies on hollow conductors for high-performance cooling and split coils to enable dual-mode gradient amplifier operation. With this approach, strength and slew rate specifications of either 100 mT/m with 1200 mT/m/ms or 200 mT/m with 600 mT/m/ms were reached at 100% duty cycle, assuming a standard gradient amplifier and cooling unit. RESULTS: After manufacturing, the specified values for maximum gradient strength, maximum switching rate, and field geometry were verified experimentally. In temperature measurements, maximum local values of 63°C were observed, confirming that the device can be operated continuously at full amplitude. Testing for peripheral nerve stimulation showed nearly unrestricted applicability in humans at full gradient performance. In measurements of acoustic noise, a maximum average sound pressure level of 132 dB(A) was determined. In vivo capability was demonstrated by head and knee imaging. Full gradient performance was employed with echo planar and zero echo time readouts. CONCLUSION: Combining extreme gradient strength and switching speed without duty cycle limitations, the described system offers unprecedented options for rapid and short-T2 imaging. Magn Reson Med 79:3256-3266, 2018. © 2017 International Society for Magnetic Resonance in Medicine.


Subject(s)
Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Brain/diagnostic imaging , Equipment Design , Humans , Knee/diagnostic imaging , Male , Nonlinear Dynamics , Phantoms, Imaging , Temperature
18.
Magn Reson Med ; 79(2): 770-778, 2018 02.
Article in English | MEDLINE | ID: mdl-28556247

ABSTRACT

PURPOSE: To assess the potential of a real-time field-control (FC) system for mitigating effects of spatiotemporal field fluctuations in quantitative susceptibility mapping (QSM) at 7 T. METHODS: Magnitude, phase, and QSM images of phantoms and healthy volunteers were acquired under standard conditions and under induced field perturbation (FP) (phantoms: periodic water-bottle displacement; volunteers: deep breathing and forearm movement) with and without FC, which continuously detects and minimizes magnetic-field variations. RESULTS: Field control successfully eliminated FP-induced impairment of phantom image quality and deviations from a linear susceptibility increase for increasing gadolinium concentration in a Gd dilution series (y = 320x - 0.60, R2 = 0.93 for the scan with FP and FC versus y = 259x - 0.54, R2 = 0.78 for the scan with FP and no FC (slope literature value: 326 ppm L/mol)). Similarly, in volunteers, FC allowed a recovery of a FP-induced loss of identifiable brain structures and reduced the relative change of mean susceptibilities and standard deviations (93 ± 53% to 34 ± 46%) in all regions of interests with respect to the reference scan. CONCLUSIONS: Real-time FC improved the delineation of brain structures and the match of susceptibility values with reference values obtained without FP. Magn Reson Med 79:770-778, 2018. © 2017 International Society for Magnetic Resonance in Medicine.


Subject(s)
Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Algorithms , Brain/diagnostic imaging , Humans , Phantoms, Imaging
19.
NMR Biomed ; 30(10)2017 Oct.
Article in English | MEDLINE | ID: mdl-28678353

ABSTRACT

T2 * mapping offers access to a number of important structural and physiological tissue parameters. It is robust against RF field variations and overall signal scaling. However, T2 * measurement is highly sensitive to magnetic field errors, including perturbations caused by breathing motion at high baseline field. The goal of this work is to assess this issue in T2 * mapping of the brain and to study the benefit of field stabilization by feedback field control. T2 * quantification in the brain was investigated by phantom and in vivo measurements at 7 T. Repeated measurements were made with and without feedback field control using NMR field sensing and dynamic third-order shim actuation. The precision and reliability of T2 * quantification was assessed by studying variation across repeated measurements as well as fitting errors. Breathing effects were found to introduce significant error in T2 * mapping results. Field control mitigates this problem substantially. In a phantom it virtually eliminates the effects of emulated breathing fluctuations in the head. In vivo it enhances the structural fidelity of T2 * maps and reduces fitting residuals along with standard deviation. In conclusion, feedback field control improves the fidelity of T2 * mapping in the presence of field perturbations. It is an effective means of countering bulk susceptibility effects of breathing and hence holds particular promise for efforts to leverage high field for T2 * studies in vivo.


Subject(s)
Feedback , Magnetic Resonance Imaging/methods , Adult , Humans , Male , Phantoms, Imaging
20.
Magn Reson Med ; 77(1): 83-91, 2017 01.
Article in English | MEDLINE | ID: mdl-27770473

ABSTRACT

PURPOSE: The purpose of this work was to improve the quality of single-shot spiral MRI and demonstrate its application for diffusion-weighted imaging. METHODS: Image formation is based on an expanded encoding model that accounts for dynamic magnetic fields up to third order in space, nonuniform static B0 , and coil sensitivity encoding. The encoding model is determined by B0 mapping, sensitivity mapping, and concurrent field monitoring. Reconstruction is performed by iterative inversion of the expanded signal equations. Diffusion-tensor imaging with single-shot spiral readouts is performed in a phantom and in vivo, using a clinical 3T instrument. Image quality is assessed in terms of artefact levels, image congruence, and the influence of the different encoding factors. RESULTS: Using the full encoding model, diffusion-weighted single-shot spiral imaging of high quality is accomplished both in vitro and in vivo. Accounting for actual field dynamics, including higher orders, is found to be critical to suppress blurring, aliasing, and distortion. Enhanced image congruence permitted data fusion and diffusion tensor analysis without coregistration. CONCLUSION: Use of an expanded signal model largely overcomes the traditional vulnerability of spiral imaging with long readouts. It renders single-shot spirals competitive with echo-planar readouts and thus deploys shorter echo times and superior readout efficiency for diffusion imaging and further prospective applications. Magn Reson Med 77:83-91, 2017. © 2016 International Society for Magnetic Resonance in Medicine.


Subject(s)
Diffusion Magnetic Resonance Imaging/methods , Image Processing, Computer-Assisted/methods , Algorithms , Brain/diagnostic imaging , Humans , Male , Phantoms, Imaging
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