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1.
Sci Total Environ ; 705: 135877, 2020 Feb 25.
Article in English | MEDLINE | ID: mdl-31818579

ABSTRACT

An important policy consideration for integrated land and water management is to understand the spatial distribution of nitrate attenuation in the groundwater system, for which redox condition is the key indicator. This paper proposes a methodology to accommodate the computational demands of large datasets, and presents national-scale predictions of groundwater redox class for New Zealand. Our approach applies statistical learning methods to relate the redox class determined on groundwater samples to spatially varying attributes. The trained model uses these spatial variables to predict redox status in areas without sample data. We assembled the groundwater sample data from regional authority databases, and assigned each sample a redox class. A key achievement was to overcome the influence of sample selection bias on model training via oversampling. We removed additional bias imposed by imbalances in the predictor variables by applying a conditional inference random forest classifier. The unbiased trained model uses eight predictors, and achieves a high validation performance (accuracy 0.81, kappa 0.71), providing good confidence in model predictions. National maps are provided for redox class and probability at specified depths. Feature importance rankings indicate that reducing conditions are associated with poorly-drained soils, and to a lesser extent, high hydrological variability, low elevation, and low-permeability lithology. These conditions are common in New Zealand's coastal and lowland plains, where artificial drainage is required to make land suitable for production. The spatial extent of reduced groundwater increases with depth, suggesting a shallow influence of soil infiltration or mobile organic carbon, and a deeper influence of lithological electron donors. Our model provides unbiased predictions at a scale relevant for environmental policy development and legislation. Identifying where the ecosystem service provided by denitrification can be utilised will enable spatially targeted interventions that can achieve the desired environmental outcome in a more cost-effective manner than non-targeted interventions.

2.
Ground Water ; 56(4): 647-666, 2018 07.
Article in English | MEDLINE | ID: mdl-29271082

ABSTRACT

New Zealand's gravel-bed rivers have deposited coarse, highly conductive gravel aquifers that are predominantly fed by river water. Managing their groundwater resources is challenging because the recharge mechanisms in these rivers are poorly understood and recharge rates are difficult to predict, particularly under a more variable future climate. To understand the river-groundwater exchange processes in gravel-bed rivers, we investigate the Wairau Plain Aquifer using a three-dimensional groundwater flow model which was calibrated using targeted field observations, "soft" information from experts of the local water authority, parameter regularization techniques, and the model-independent parameter estimation software PEST. The uncertainty of simulated river-aquifer exchange flows, groundwater heads, spring flows, and mean transit times were evaluated using Null-space Monte-Carlo methods. Our analysis suggests that the river is hydraulically perched (losing) above the regional water table in its upper reaches and is gaining downstream where marine sediments overlay unconfined gravels. River recharge rates are on average 7.3 m3 /s, but are highly dynamic in time and variable in space. Although the river discharge regularly hits 1000 m3 /s, the net exchange flow rarely exceeds 12 m3 /s and seems to be limited by the physical constraints of unit-gradient flux under disconnected rivers. An important finding for the management of the aquifer is that changes in aquifer storage are mainly affected by the frequency and duration of low-flow periods in the river. We hypothesize that the new insights into the river-groundwater exchange mechanisms of the presented case study are transferable to other rivers with similar characteristics.


Subject(s)
Groundwater , Rivers , Climate , New Zealand
3.
Organometallics ; 33(4): 858-867, 2014 Feb 24.
Article in English | MEDLINE | ID: mdl-24803716

ABSTRACT

Reported are complexes of the formula Fe(dithiolate)(CO)2(diphos) and their use to prepare homo- and heterobimetallic dithiolato derivatives. The starting iron dithiolates were prepared by a one-pot reaction of FeCl2 and CO with chelating diphosphines and dithiolates, where dithiolate = S2(CH2)22- (edt2-), S2(CH2)32- (pdt2-), S2(CH2)2(C(CH3)2)2- (Me2pdt2-) and diphos = cis-C2H2(PPh2)2 (dppv), C2H4(PPh2)2 (dppe), C6H4(PPh2)2 (dppbz), C2H4[P(C6H11)2]2 (dcpe). The incorporation of 57Fe into such building block complexes commenced with the conversion of 57Fe into 57Fe2I4( i PrOH)4, which then was treated with K2pdt, CO, and dppe to give 57Fe(pdt)(CO)2(dppe). NMR and IR analyses show that these complexes exist as mixtures of all-cis and trans-CO isomers, edt2- favoring the former and pdt2- the latter. Treatment of Fe(dithiolate)(CO)2(diphos) with the Fe(0) reagent (benzylideneacetone)Fe(CO)3 gave Fe2(dithiolate)(CO)4(diphos), thereby defining a route from simple ferrous salts to models for hydrogenase active sites. Extending the building block route to heterobimetallic complexes, treatment of Fe(pdt)(CO)2(dppe) with [(acenaphthene)Mn(CO)3]+ gave [(CO)3Mn(pdt)Fe(CO)2(dppe)]+ ([3d(CO)]+). Reduction of [3d(CO)]+ with BH4- gave the Cs -symmetric µ-hydride (CO)3Mn(pdt)(H)Fe(CO)(dppe) (H3d). Complex H3d is reversibly protonated by strong acids, the proposed site of protonation being sulfur. Treatment of Fe(dithiolate)(CO)2(diphos) with CpCoI2(CO) followed by reduction by Cp2Co affords CpCo(dithiolate)Fe(CO)(diphos) (4), which can also be prepared from Fe(dithiolate)(CO)2(diphos) and CpCo(CO)2. Like the electronically related (CO)3Fe(pdt)Fe(CO)(diphos), these complexes undergo protonation to afford the µ-hydrido complexes [CpCo(dithiolate)HFe(CO)(diphos)]+. Low-temperature NMR studies indicate that Co is the kinetic site of protonation.

5.
Inorg Chem ; 50(12): 5558-66, 2011 Jun 20.
Article in English | MEDLINE | ID: mdl-21574553

ABSTRACT

The paper surveys the binding of anions to the unsaturated 16e Lewis acid [Cp*Ir(TsDPEN)](+) ([1H](+)), where TsDPEN is racemic H(2)NCHPhCHPhNTs(-). The derivatives Cp*IrX(TsDPEN) were characterized crystallographically for X(-) = CN(-), Me(C═NH)S(-), NO(2)(-), 2-pyridonate, and 0.5 MoS(4)(2-). [(1H)(2)(µ-CN)](+) forms from [1H](+) and 1H(CN). Aside from 2-pyridone, amides generally add reversibly and bind to Ir through N. Thioacetamide binds irreversibly through sulfur. Compounds of the type Cp*IrX(TsDPEN) generally form diastereoselectively, although diastereomeric products were observed for the strong ligands (X = CN(-), H(-) (introduced via BH(4)(-)), or Me(C═NH)S(-)). Related experiments on the reaction (p-cymene)Ru(TsDPEN-H) + BH(4)(-) gave two diastereomers of (p-cymene)RuH(TsDPEN), the known hydrogenation catalyst and a second isomer that hydrogenated acetophenone more slowly. These experiment provide new insights into the enantioselectivity of these catalysts. Diastereomerization in all cases was first order in metal with modest solvent effects. The diphenyl groups are generally diequatorial for the stable diastereomers. For the 2-pyridonate adduct, axial phenyl groups are stabilized in the solid state by puckering of the IrN(2)C(2) ring induced by intramolecular hydrogen-bonding. Crystallographic analysis of [Cp*Ir(TsDPEN)](2)(MoS(4)) revealed a unique example of a κ(1),κ(1)-tetrathiometallate ligand. Cp*Ir(SC(NH)Me)TsDPEN) is the first example of a κ(1)-S-thioamidato complex.

6.
J Am Chem Soc ; 132(50): 17733-40, 2010 Dec 22.
Article in English | MEDLINE | ID: mdl-21114298

ABSTRACT

This paper summarizes studies on the redox behavior of synthetic models for the [FeFe]-hydrogenases, consisting of diiron dithiolato carbonyl complexes bearing the amine cofactor and its N-benzyl derivative. Of specific interest are the causes of the low reactivity of oxidized models toward H(2), which contrasts with the high activity of these enzymes for H(2) oxidation. The redox and acid-base properties of the model complexes [Fe(2)[(SCH(2))(2)NR](CO)(3)(dppv)(PMe(3))](+) ([2](+) for R = H and [2'](+) for R = CH(2)C(6)H(5), dppv = cis-1,2-bis(diphenylphosphino)ethylene)) indicate that addition of H(2) followed by deprotonation are (i) endothermic for the mixed valence (Fe(II)Fe(I)) state and (ii) exothermic for the diferrous (Fe(II)Fe(II)) state. The diferrous state is shown to be unstable with respect to coordination of the amine to Fe, a derivative of which was characterized crystallographically. The redox and acid-base properties for the mixed valence models differ strongly for those containing the amine cofactor versus those derived from propanedithiolate. Protonation of [2'](+) induces disproportionation to a 1:1 mixture of the ammonium [H2'](+) (Fe(I)Fe(I)) and the dication [2'](2+) (Fe(II)Fe(II)). This effect is consistent with substantial enhancement of the basicity of the amine in the Fe(I)Fe(I) state vs the Fe(II)Fe(I) state. The Fe(I)Fe(I) ammonium compounds are rapid and efficient H-atom donors toward the nitroxyl compound TEMPO. The atom transfer is proposed to proceed via the hydride. Collectively, the results suggest that proton-coupled electron-transfer pathways should be considered for H(2) activation by the [FeFe]-hydrogenases.


Subject(s)
Aza Compounds , Coenzymes , Hydrogenase/chemistry , Iron-Sulfur Proteins/chemistry , Models, Molecular , Aza Compounds/chemistry , Catalysis , Catalytic Domain , Coenzymes/chemistry , Coenzymes/physiology , Molecular Structure , Oxidation-Reduction , Stereoisomerism , Thermodynamics
7.
Dalton Trans ; 39(12): 3011-9, 2010 Mar 28.
Article in English | MEDLINE | ID: mdl-20221534

ABSTRACT

The stepwise formation of bridging (mu-) hydrides of diiron dithiolates is discussed with attention on the pathway for protonation and subsequent isomerizations. Our evidence is consistent with protonations occurring at a single Fe center, followed by isomerization to a series of mu-hydrides. Protonation of Fe(2)(edt)(CO)(4)(dppv) (1) gave a single mu-hydride with dppv spanning apical and basal sites, which isomerized at higher temperatures to place the dppv into a dibasal position. Protonation of Fe(2)(pdt)(CO)(4)(dppv) (2) followed an isomerization pathway similar to that for [1H](+), except that a pair of isomeric terminal hydrides were observed initially, resulting from protonation at the Fe(CO)(3) or Fe(CO)(dppv) site. The first observable product from low temperature protonation of the tris-phosphine Fe(2)(edt)(CO)(3)(PMe(3))(dppv) (3) was a single mu-hydride wherein PMe(3) is apical and the dppv ligand spans apical and basal sites. Upon warming, this isomer converted fully but in a stepwise manner to a mixture of three other isomeric hydrides. Protonation of Fe(2)(pdt)(CO)(3)(PMe(3))(dppv) (4) proceeded similarly to the edt analogue 3, however a terminal hydride was observed, albeit only briefly and at very low temperatures (-90 degrees C). Low-temperature protonation of the bis-chelates Fe(2)(xdt)(CO)(2)(dppv)(2) produced exclusively the terminal hydrides [HFe(2)(xdt)(mu-CO)(CO)(dppv)(2)](+) (xdt = edt and pdt), which subsequently isomerized to a pair of mu-hydrides. At room temperature these (dppv)(2) derivatives convert to an equilibrium of two isomers, one C(2)-symmetric and the other C(s)-symmetric. The stability of the terminal hydrides correlates with the (C(2)-isomer)/(C(s)-isomer) equilibrium ratio, which reflects the size of the dithiolate. The isomerization was found to be unaffected by the presence of excess acid, by solvent polarity, and the presence of D(2)O. This isomerization mechanism is proposed to be intramolecular, involving a 120 degrees rotation of the HFeL(3) subunit to an unobserved terminal basal hydride as the rate-determining step. The observed stability of the hydrides was supported by DFT calculations, which also highlight the instability of the basal terminal hydrides. Isomerization of the mu-hydride isomers occurs on alternating FeL(3) via 120 degree rotations without generating D(2)O-exchangeable intermediates.


Subject(s)
Hydrogen/chemistry , Hydrogenase/chemistry , Iron/chemistry , Hydrogenase/metabolism , Isomerism , Models, Molecular , Molecular Conformation , Protein Structure, Tertiary , Protons , Sulfhydryl Compounds/chemistry
8.
Inorg Chem ; 48(10): 4462-9, 2009 May 18.
Article in English | MEDLINE | ID: mdl-19374433

ABSTRACT

The photoreaction of Fe(CO)(5) and cyanide salts in MeCN solution affords the dianion [Fe(CN)(2)(CO)(3)](2-), conveniently isolated as [K(18-crown-6)](2)[Fe(CN)(2)(CO)(3)]. Solutions of [Fe(CN)(2)(CO)(3)](2-) oxidize irreversibly at -600 mV (vs Ag/AgCl) to give primarily [Fe(CN)(3)(CO)(3)](-). Protonation of the dianion affords the hydride [K(18-crown-6)][HFe(CN)(2)(CO)(3)] with a pK(a) approximately 17 (MeCN). The ferrous hydride exhibits enhanced electrophilicity vs its dianionic precursor, which resists substitution. Treatment of [K(18-crown-6)][Fe(CN)(2)(CO)(3)] with tertiary phosphines and phosphites gives isomeric mixtures of [HFe(CN)(2)(CO)(2)L](-) (L = P(OPh)(3) and PPh(3)). Carbonyl substitution on [1H(CO)(2)](-) by P(OPh)(3) is first-order in both the phosphite and iron (k = 0.18 M(-1) s(-1) at 22 degrees C) with DeltaH(double dagger) = 51.6 kJ mol(-1) and DeltaS(double dagger) = -83.0 J K(-1) mol(-1). These ligands are displaced under an atmosphere of CO. With cis-Ph(2)PCH=CHPPh(2) (dppv), we obtained the monocarbonyl, [HFe(CN)(2)(CO)(dppv)](-), a highly basic hydride (pK(a) > 23.3) that rearranges in solution to a single isomer. Treatment of [K(18-crown-6)][HFe(CN)(2)(CO)(3)] with Et(4)NCN resulted in rapid deprotonation to give [Fe(CN)(2)(CO)(3)](2-) and HCN. The tricyano hydride [HFe(CN)(3)(CO)(2)](2-) is prepared by the reaction of [HFe(CN)(2)(CO)(2)(PPh(3))](-) and [K(18-crown-6)]CN. Similar to the phosphine and phosphite derivatives, [HFe(CN)(3)(CO)(2)](2-) exists as a mixture of all three possible isomers. Protonation of the hydrides [HFe(CN)(2)(CO)(dppv)](-) and [HFe(CN)(3)(CO)(2)](-) in acetonitrile solutions releases H(2) and gives the corresponding acetonitrile complexes [K(18-crown-6)][Fe(CN)(3)(NCMe)(CO)(2)] and Fe(CN)(2)(NCMe)(CO)(dppv). Alkylation of [K(18-crown-6)](2)[Fe(CN)(2)(CO)(3)] with MeOTf gives the thermally unstable [MeFe(CN)(2)(CO)(3)](-), which was characterized spectroscopically at -40 degrees C. Reaction of dppv with [MeFe(CN)(2)(CO)(3)](-) gives the acetyl complex, [Fe(CN)(2)(COMe)(CO)(dppv)](-). Whereas [Fe(CN)(2)(CO)(3)](2-) undergoes protonation and methylation at Fe, acid chlorides give the iron(0) N-acylisocyanides [Fe(CN)(CO)(3)(CNCOR)](-) (R = Ph, CH(3)). The solid state structures of [K(18-crown-6)][HFe(CN)(2)(CO)(dppv)], Fe(CN)(2)(NCMe)(CO)(dppv), and [K(18-crown-6)](2)[HFe(CN)(3)(CO)(2)] were confirmed crystallographically. In all three cases, the cyanide ligands are cis to the hydride or acetonitrile ligands.


Subject(s)
Biomimetic Materials/chemistry , Hydrogenase/chemistry , Iron/chemistry , Models, Molecular , Binding Sites , Catalysis , Chemical Phenomena , Crystallography, X-Ray , Molecular Structure , Organometallic Compounds/chemistry , Thermodynamics
9.
Inorg Chem ; 48(2): 638-45, 2009 Jan 19.
Article in English | MEDLINE | ID: mdl-19138145

ABSTRACT

The reactivity of metal olefin complexes with non-innocent ligands (NILs) was examined. Treatment of PtCl(2)(diene) with the deprotonated catechol or aminophenol ligands afforded the corresponding Pt(NIL)(diene) complexes. The Pt((t)BA(F)Ph)(COD), Pt((t)BA(F)Ph)(nbd), and Pt(O(2)C(6)H(2)(t)Bu(2))(COD) (H(2)(t)BA(F)Ph = 2-(2-trifluoromethyl)anilino-4,6-di-tert-butylphenol, H(2)O(2)C(6)H(2)(t)Bu(2) = 3,5-di-tert-butylcatechol) complexes were examined by cyclic voltammetry. Treatment of Pt((t)BA(F)Ph)(COD) or Pt((t)BA(F)Ph)(nbd) with AgPF(6) afforded the imino-semiquinones [Pt((t)BA(F)Ph)(COD)]PF(6) or [Pt((t)BA(F)Ph)(nbd)]PF(6), respectively. The [Pt((t)BA(F)Ph)(COD)] complex was unreactive toward nucleophiles, whereas the oxidized derivative, [Pt((t)BA(F)Ph)(COD)]PF(6), rapidly and stereospecifically added alkoxides at the carbon trans to the phenolate. The Pt((t)BA(F)Ph)(COD), [Pt((t)BA(F)Ph)(COD)]PF(6), Pt((t)BA(F)Ph)(C(8)H(12)OMe), and [Cp(2)Co][Pt((t)BA(F)Ph)(C(8)H(12)OMe)] complexes were characterized crystallographically.

10.
Inorg Chem ; 47(24): 11816-24, 2008 Dec 15.
Article in English | MEDLINE | ID: mdl-19007207

ABSTRACT

Nitrosyl derivatives of diiron dithiolato carbonyls have been prepared starting from the precursor Fe(2)(S(2)C(n)H(2n))(dppv)(CO)(4) (dppv = cis-1,2-bis(diphenylphosphinoethylene). These studies expand the range of substituted diiron(I) dithiolato carbonyl complexes. From [Fe(2)(S(2)C(2)H(4))(CO)(3)(dppv)(NO)]BF(4) ([1(CO)(3)]BF(4)), the following compounds were prepared: [1(CO)(2)(PMe(3))]BF(4), [1(CO)(dppv)]BF(4), NEt(4)[1(CO)(CN)(2)], and 1(CO)(CN)(PMe(3)). Some of these substitution reactions occur via the addition of 2 equiv of the nucleophile followed by the dissociation of one nucleophile and decarbonylation. Such a double adduct was characterized crystallographically in the case of [Fe(2)(S(2)C(2)H(4))(CO)(3)(dppv)(NO)(PMe(3))(2)]BF(4). This result shows that the addition of two ligands causes scission of the Fe-Fe bond and one Fe-S bond. When cyanide is the nucleophile, nitrosyl migrates away from the Fe(dppv) site, yielding a Fe(CN)(2)(NO) derivative. Compounds [1(CO)(3)]BF(4), [1(CO)(2)(PMe(3))]BF(4), and [1(CO)(dppv)]BF(4) were also prepared by the addition of NO(+) to the di-, tri-, and tetrasubstituted precursors. In these cases, the NO(+) appears to form an initial 36e(-) adduct containing terminal Fe-NO, followed by decarbonylation. Several complexes were prepared by the addition of NO to the mixed-valence Fe(I)Fe(II) derivatives. The diiron nitrosyl complexes reduce at mild potentials and in certain cases form weak adducts with CO. IR and EPR spectra of 1(CO)(dppv), generated by low-temperature reduction of [1(CO)(dppv)]BF(4) with Co(C(5)Me(5))(2), indicates that the SOMO is located on the FeNO subunit.


Subject(s)
Hydrogenase/chemistry , Iron-Sulfur Proteins/chemistry , Nitrogen Oxides/chemistry , Sulfhydryl Compounds/chemistry , Catalysis , Catalytic Domain , Crystallography, X-Ray , Cyanides , Electrochemistry , Kinetics , Ligands , Magnetic Resonance Spectroscopy , Models, Molecular , Spectrophotometry, Infrared , Thermodynamics
11.
Chem Commun (Camb) ; (43): 5493-5, 2008 Nov 21.
Article in English | MEDLINE | ID: mdl-18997929

ABSTRACT

A Zn-cornered, mixed-ligand, metal-organic framework (MOF) bearing TMS-protected acetylenes has been constructed and its surface decorated with organic molecules via'click chemistry', in a demonstration of selective post-synthesis functionalization.


Subject(s)
Copper/chemistry , Organometallic Compounds/chemistry , Organometallic Compounds/chemical synthesis , Zinc/chemistry , Alkynes/chemistry , Crystallography, X-Ray , Cyclization , Ligands , Models, Molecular , Molecular Structure , Particle Size , Surface Properties
12.
J Am Chem Soc ; 130(36): 12021-30, 2008 Sep 10.
Article in English | MEDLINE | ID: mdl-18700771

ABSTRACT

This study probes the impact of electronic asymmetry of diiron(I) dithiolato carbonyls. Treatment of Fe2(S2C(n)H(2n))(CO)(6-x)(PMe3)x compounds (n = 2, 3; x = 1, 2, 3) with NOBF4 gave the derivatives [Fe2(S2C(n)H(2n))(CO)(5-x)(PMe3)x(NO)]BF4, which are electronically unsymmetrical because of the presence of a single NO(+) ligand. Whereas the monophosphine derivative is largely undistorted, the bis(PMe3) derivatives are distorted such that the CO ligand on the Fe(CO)(PMe3)(NO)(+) subunit is semibridging. Two isomers of [Fe2(S2C3H6)(CO)3(PMe3)2(NO)]BF4 were characterized spectroscopically and crystallographically. Each isomer features electron-rich Fe(CO)2PMe3 and electrophilic Fe(CO)(PMe3)(NO)(+) subunits. These species are in equilibrium with an unobserved isomer that reversibly binds CO (DeltaH = -35 kJ/mol, DeltaS = -139 J mol(-1) K(-1)) to give the symmetrical adduct [Fe2(S2C3H6)(mu-NO)(CO)4(PMe3)2]BF4. In contrast to Fe2(S2C3H6)(CO)4(PMe3)2, the bis(PMe3) nitrosyl complexes readily undergo CO substitution to give the (PMe3)3 derivatives. The nitrosyl complexes reduce at potentials that are approximately 1 V milder than their carbonyl counterparts. Results of density functional theory calculations, specifically natural bond orbital analysis, reinforce the electronic resemblance of the nitrosyl complexes to the corresponding mixed-valence diiron complexes. Unlike other diiron dithiolato carbonyls, these species undergo reversible reductions at mild potentials. The results show that the novel structural and chemical features associated with mixed-valence diiron dithiolates (the so-called H(ox) models) can be replicated in the absence of mixed-valency by the introduction of electronic asymmetry.


Subject(s)
Ferric Compounds/chemistry , Hydrogenase/chemistry , Iron-Sulfur Proteins/chemistry , Nitrogen Oxides/chemistry , Sulfhydryl Compounds/chemistry , Binding Sites , Biomimetic Materials/chemistry , Biomimetic Materials/metabolism , Crystallography, X-Ray , Electrochemistry , Ferric Compounds/metabolism , Hydrogenase/metabolism , Iron-Sulfur Proteins/metabolism , Models, Molecular , Nuclear Magnetic Resonance, Biomolecular , Sulfhydryl Compounds/metabolism
13.
Inorg Chem ; 47(15): 7002-8, 2008 Aug 04.
Article in English | MEDLINE | ID: mdl-18610969

ABSTRACT

This report describes routes to iron dithiolato carbonyls that do not require preformed iron carbonyls. The reaction of FeCl 2, Zn, and Q 2S 2C n H 2 n (Q (+) = Na (+), Et 3NH (+)) under an atmosphere of CO affords Fe 2(S 2C n H 2 n )(CO) 6 ( n = 2, 3) in yields >70%. The method was employed to prepare Fe 2(S 2C 2H 4)( (13)CO) 6. Treatment of these carbonylated mixtures with tertiary phosphines, instead of Zn, gave the ferrous species Fe 3(S 2C 3H 6) 3(CO) 4(PR 3) 2, for R = Et, Bu, and Ph. Like the related complex Fe 3(SPh) 6(CO) 6, these compounds consist of a linear arrangement of three conjoined face-shared octahedral centers. Omitting the phosphine but with an excess of dithiolate, we obtained the related mixed-valence triiron species [Fe 3(S 2C n H 2 n ) 4(CO) 4] (-). The highly reducing all-ferrous species [Fe 3(S 2C n H 2 n ) 4(CO) 4] (2-) is implicated as an intermediate in this transformation. Reactive forms of iron, prepared by the method of Rieke, also combined with dithiols under a CO atmosphere to give Fe 2(S 2C n H 2 n )(CO) 6 in modest yields under mild conditions. Studies on the order of addition indicate that ferrous thiolates are formed prior to the onset of carbonylation. Crystallographic characterization demonstrated that the complexes Fe 3(S 2C 3H 6) 3(CO) 4(PEt 3) 2 and PBnPh 3[Fe 3(S 2C 3H 6) 4(CO) 4] feature high-spin ferrous and low-spin ferric as the central metal, respectively.


Subject(s)
Carbon/chemistry , Ferric Compounds/chemistry , Hydrogenase/metabolism , Iron-Sulfur Proteins/metabolism , Iron/chemistry , Oxygen/chemistry , Binding Sites , Crystallography, X-Ray , Ferrous Compounds/chemistry , Hydrogenase/chemistry , Iron-Sulfur Proteins/chemistry
14.
Inorg Chem ; 47(16): 7405-14, 2008 Aug 18.
Article in English | MEDLINE | ID: mdl-18620387

ABSTRACT

The one-electron oxidations of a series of diiron(I) dithiolato carbonyls were examined to evaluate the factors that affect the oxidation state assignments, structures, and reactivity of these low-molecular weight models for the H ox state of the [FeFe]-hydrogenases. The propanedithiolates Fe 2(S 2C 3H 6)(CO) 3(L)(dppv) (L = CO, PMe 3, P i-Pr 3) oxidize at potentials approximately 180 mV milder than the related ethanedithiolates ( Angew. Chem., Int. Ed. 2007, 46, 6152). The steric clash between the central methylene of the propanedithiolate and the phosphine favors the rotated structure, which forms upon oxidation. Electron Paramagnetic Resonance (EPR) spectra for the mixed-valence cations indicate that the unpaired electron is localized on the Fe(CO)(dppv) center in both [Fe 2(S 2C 3H 6)(CO) 4(dppv)]BF 4 and [Fe 2(S 2C 3H 6)(CO) 3(PMe 3)(dppv)]BF 4, as seen previously for the ethanedithiolate [Fe 2(S 2C 2H 4)(CO) 3(PMe 3)(dppv)]BF 4. For [Fe 2(S 2C n H 2 n )(CO) 3(P i-Pr 3)(dppv)]BF 4; however, the spin is localized on the Fe(CO) 2(P i-Pr 3) center, although the Fe(CO)(dppv) site is rotated in the crystalline state. IR and EPR spectra, as well as redox potentials and density-functional theory (DFT) calculations, suggest that the Fe(CO) 2(P i-Pr 3) site is rotated in solution, driven by steric factors. Analysis of the DFT-computed partial atomic charges for the mixed-valence species shows that the Fe atom featuring a vacant apical coordination position is an electrophilic Fe(I) center. One-electron oxidation of [Fe 2(S 2C 2H 4)(CN)(CO) 3(dppv)] (-) resulted in 2e oxidation of 0.5 equiv to give the mu-cyano derivative [Fe (I) 2(S 2C 2H 4)(CO) 3(dppv)](mu-CN)[Fe (II) 2(S 2C 2H 4)(mu-CO)(CO) 2(CN)(dppv)], which was characterized spectroscopically.


Subject(s)
Hydrogenase/chemistry , Hydrogenase/metabolism , Iron-Sulfur Proteins/chemistry , Iron-Sulfur Proteins/metabolism , Models, Molecular , Binding Sites , Crystallography, X-Ray , Cyanides/chemistry , Electron Spin Resonance Spectroscopy , Electrons , Ligands , Oxidation-Reduction , Propane/analogs & derivatives , Propane/chemistry , Propane/metabolism , Quantum Theory , Sulfhydryl Compounds/chemistry , Sulfhydryl Compounds/metabolism
15.
Organometallics ; 27(1): 119-125, 2008 Jan.
Article in English | MEDLINE | ID: mdl-18552987

ABSTRACT

Condensation of Fe(2)(SH)(2)(CO)(6), acetaldehyde, and (NH(4))(2)CO(3) affords the methyl-substituted azadithiolate Fe(2)[(SCHMe)(2)NH](CO)(6) (1). The complex exists mainly (~95%) as the meso diastereomer, but the d,l diastereoisomers could be detected. DFT calculations predict that the meso isomer would be 2.5 kcal/mol more stable than the d,l isomer due to conventional nonbonding interactions between the methyl groups and the ring hydrogen atoms. Crystallographic analysis of meso-1 confirms that the two methyl groups are equatorial, constraining the diferraazadithiolate bicycle to a conformation that desymmetrizes the diiron center. The lowered symmetry is confirmed by the observation of two (13)C NMR signals in the FeCO region under conditions of fast turnstile rotation at the Fe(CO)(3) groups. The pK(a) value of the amine in 1 is 7.89 (all pK(a)'s determined in MeCN solution), which is similar to a redetermined value for Fe(2)[(SCH(2))(2)NH](CO)(6) (2, pK(a) = 7.98) and only slightly less basic than the tertiary amine Fe(2)[(SCH(2))(2)NMe](CO)(6) (pK(a) = 8.14). Substitution of 1 with PMe(3) proceeded via the intermediacy of two isomers of Fe(2)[(SCHMe)(2)NH](CO)(5)(PMe(3)), affording Fe(2)[(SCHMe)(2)NH](CO)(4)(PMe(3))(2) (3). (31)P NMR spectra confirm that the two PMe(3) ligands in 3 are nonequivalent, consistent with the desymmetrizing effect of the dithiolate. The pK(a) value of the amine in 3 was found to be 11.3. Using triphenylphosphine, we prepared Fe(2)[(SCHMe)(2)NH](CO)(5)(PPh(3)) as a single regioisomer.

16.
J Am Chem Soc ; 130(15): 5293-301, 2008 Apr 16.
Article in English | MEDLINE | ID: mdl-18341276

ABSTRACT

Oxidation of the electron-rich (E(1/2) = -175 vs Ag/AgCl) ethanedithiolato complex Fe2(S2C2H4)(CO)2(dppv)2 (1) under a CO atmosphere yielded [Fe2(S2C2H4)(mu-CO)(CO)2(dppv)2](+) ([1(CO)](+)), a model for the H(ox)(CO) state of the [FeFe]-hydrogenases. This complex exists as two isomers: a kinetically favored unsymmetrical derivative, unsym-[1(CO)](+), and a thermodynamically favored isomer, sym-[1(CO)](+), wherein both diphosphines span apical and basal sites. Crystallographic characterization of sym-[1(CO)](+) confirmed a C2-symmetric structure with a bridging CO ligand and an elongated Fe-Fe bond of 2.7012(14) A, as predicted previously. Oxidation of sym-[1(CO)](+) and unsym-[1(CO)](+) again by 1e(-) oxidation afforded the respective diamagnetic diferrous derivatives where the relative stabilities of the sym and unsym isomers are reversed. DFT calculations indicate that the stabilities of sym and unsym isomers are affected differently by the oxidation state of the diiron unit: the mutually trans CO ligands in the sym isomer are more destabilizing in the mixed-valence state than in the diferrous state. EPR analysis of mixed-valence complexes revealed that, for [1](+), the unpaired spin is localized on a single iron center, whereas for unsym/sym-[1(CO)](+), the unpaired spin was delocalized over both iron centers, as indicated by the magnitude of the hyperfine coupling to the phosphine ligands trans to the Fe-Fe vector. Oxidation of 1 by 2 equiv of acetylferrocenium afforded the dication [1](2+), which, on the basis of low-temperature IR spectrum, is structurally similar to [1](+). Treatment of [1](2+) with CO gives unsym-[1(CO)](2+).


Subject(s)
Carbon Monoxide/chemistry , Carbon Monoxide/metabolism , Ferric Compounds/chemistry , Ferric Compounds/metabolism , Hydrogen/chemistry , Hydrogen/metabolism , Hydrogenase/metabolism , Iron-Sulfur Proteins/metabolism , Sulfhydryl Compounds/chemistry , Sulfhydryl Compounds/metabolism , Crystallography, X-Ray , Electrochemistry , Electron Spin Resonance Spectroscopy , Isomerism , Models, Molecular , Molecular Structure , Oxidation-Reduction , Spectrophotometry, Infrared
17.
J Am Chem Soc ; 130(4): 1134-5, 2008 Jan 30.
Article in English | MEDLINE | ID: mdl-18171069
18.
Inorg Chem ; 47(2): 395-7, 2008 Jan 21.
Article in English | MEDLINE | ID: mdl-18081276

ABSTRACT

Cp(*)M(2+) complexes (M = Rh, Ir; Cp(*) = C(5)Me(5)) are described for 6-(carboxymethyl)-4-methyl-2-hydroxypyridine (cmhpH(2)), an analogue of the guanylylpyridone cofactor in the hydrogenase Hmd. Three findings indicate that Cp(*)M(Hcmhp)(+) stabilizes the binding of hydrogen-bond acceptors to the sixth coordination site: (i) water binds in preference to Cl-, (ii) the adduct Cp(*)Rh(cmhp)(2-hydroxypyridine) exhibits a very short intramolecular hydrogen bond (r(o-o) = 2.38 A; (1)H NMR delta(H) 17.2), and (iii) Cp(*)Ir(cmhpH)Cl efficiently catalyzes the dehydrogenation of PhCH(OH)Me to PhC(O)Me.


Subject(s)
Hydrogenase/chemistry , Models, Molecular , Catalysis , Hydrogen Bonding
19.
J Phys Chem B ; 111(51): 14362-9, 2007 Dec 27.
Article in English | MEDLINE | ID: mdl-18052145

ABSTRACT

The study of micro- or nanocrystalline proteins by magic-angle spinning (MAS) solid-state NMR (SSNMR) gives atomic-resolution insight into structure in cases when single crystals cannot be obtained for diffraction studies. Subtle differences in the local chemical environment around the protein, including the characteristics of the cosolvent and the buffer, determine whether a protein will form single crystals. The impact of these small changes in formulation is also evident in the SSNMR spectra; however, the changes lead only to correspondingly subtle changes in the spectra. Here, we demonstrate that several formulations of GB1 microcrystals yield very high quality SSNMR spectra, although only a subset of conditions enable growth of single crystals. We have characterized these polymorphs by X-ray powder diffraction and assigned the SSNMR spectra. Assignments of the 13C and 15N SSNMR chemical shifts confirm that the backbone structure is conserved, indicative of a common protein fold, but side chain chemical shifts are changed on the surface of the protein, in a manner dependent upon crystal packing and electrostatic interactions with salt in the mother liquor. Our results demonstrate the ability of SSNMR to reveal minor structural differences among crystal polymorphs. This ability has potential practical utility for studying the formulation chemistry of industrial and therapeutic proteins, as well as for deriving fundamental insights into the phenomenon of single-crystal growth.


Subject(s)
Bacterial Proteins/chemistry , Crystallization , Magnetic Resonance Spectroscopy/methods , Protein Conformation , X-Ray Diffraction/methods
20.
J Neurosurg ; 107(3): 568-77, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17886557

ABSTRACT

OBJECT: A hollow fiber catheter was developed to improve the distribution of drugs administered via direct infusion into the central nervous system (CNS). It is a porous catheter that significantly increases the surface area of brain tissue into which a drug is infused. METHODS: Dye was infused into the mouse brain through convection-enhanced delivery (CED) using a 28-gauge needle compared with a 3-mm-long hollow fiber catheter. To determine whether a hollow fiber catheter could increase the distribution of gene therapy vectors, a recombinant adenovirus expressing the firefly luciferase reporter was injected into the mouse striatum. Gene expression was monitored using in vivo bioluminescent imaging. To assess the distribution of gene transfer, an adenovirus expressing green fluorescent protein was injected into the striatum using a hollow fiber catheter or a needle. RESULTS: Hollow fiber catheter-mediated infusion increased the volume of brain tissue labeled with dye by 2.7 times relative to needle-mediated infusion. In vivo imaging revealed that catheter-mediated infusion of adenovirus resulted in gene expression that was 10-times greater than that mediated by a needle. The catheter appreciably increased the area of brain transduced with adenovirus relative to a needle, affecting a significant portion of the injected hemisphere. CONCLUSIONS: The miniature hollow fiber catheter used in this study significantly increased the distribution of dye and adenoviral-mediated gene transfer in the mouse brain compared with the levels reached using a 28-gauge needle. Compared with standard single-port clinical catheters, the hollow fiber catheter has the advantage of millions of nanoscale pores to increase surface area and bulk flow in the CNS. Extending the scale of the hollow fiber catheter for the large mammalian brain shows promise in increasing the distribution and efficacy of gene therapy and drug therapy using CED.


Subject(s)
Adenoviridae , Brain/metabolism , Catheterization , Gene Transfer Techniques/instrumentation , Genetic Vectors/pharmacokinetics , Adenoviridae/enzymology , Adenoviridae/genetics , Animals , Biocompatible Materials , Coloring Agents/administration & dosage , Coloring Agents/pharmacokinetics , Convection , Equipment Design , Evans Blue/administration & dosage , Evans Blue/pharmacokinetics , Genetic Vectors/administration & dosage , Infusions, Parenteral/instrumentation , Luminescent Proteins/metabolism , Mice , Mice, Inbred CBA , Polymers , Sulfones
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