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1.
PeerJ ; 5: e3942, 2017.
Article in English | MEDLINE | ID: mdl-29158963

ABSTRACT

Habitat restoration projects are often conducted when prior use or extraction of natural resources results in land degradation. The success of restoration programmes, however, is variable, and studies that provide evidence of long term outcomes are valuable for evaluation purposes. This study focused on the restoration of vegetation within a limestone quarry in Dorset, UK between 1997 and 2014. Using a randomised block design, the effect of seed mix and seed rate on the development of community assemblage was investigated in comparison to a nearby target calcareous grassland site. We hypothesised that seed mix composition and sowing rate would influence both the trajectory of the grassland assemblage and final community composition. We found that species composition (in relation to both richness and community assemblage) was strongly influenced by time and to some extent by seed rate and seed mix. However, no treatments achieved strong resemblance to the calcareous grassland target vegetation; rather they resembled mesotrophic communities. We conclude that (as with previous studies) there is no "quick fix" for the establishment of a grassland community; long-term monitoring provides useful information on the trajectory of community development; sowing gets you something (in our case mesotrophic grassland), but, it may not be the target vegetation (e.g., calcicolous grassland) you want that is difficult to establish and regenerate; it is important to sow a diverse mix as subsequent recruitment opportunities are probably limited; post-establishment management should be explored further and carefully considered as part of a restoration project.

2.
PLoS One ; 12(6): e0180525, 2017.
Article in English | MEDLINE | ID: mdl-28666019

ABSTRACT

Mangrove forests of a single trees species, Avicennia marina subsp. australasica are widespread in the upper North Island of New Zealand, but there is little available information on the diversity of epiphytes such as lichens within them. A survey of 200 trees from 20 mangrove sites recorded a total of 106 lichen species from 45 genera. Two of these species are considered to be 'Threatened', five 'At Risk' and 27 'Data Deficient'. Multiple regression indicated that tree diameter (DBH) and mean annual rain days positively influenced site species richness. Multidimensional scaling showed that sites from the same geographical region generally formed distinct clusters. Redundancy analysis indicated that mean annual wet days, latitude and DBH measurably influenced species composition.


Subject(s)
Avicennia , Lichens/classification , Rhizophoraceae , Ecosystem , New Zealand
3.
PeerJ ; 4: e2236, 2016.
Article in English | MEDLINE | ID: mdl-27547545

ABSTRACT

Background. Many aphid species, including the pea aphid Acyrthosiphon pisum, exhibit a behaviour where they drop or fall from their host plant, a commonly used strategy to avoid predation, parasitism or physical disturbance. We hypothesised that there was a physiological non-consumptive cost due to such dropping behaviour because aphids would expend energy re-establishing themselves on a host plant and also lose feeding time. Methods. We evaluated this non-consumptive cost by determining the development time and reproductive potential of pea aphids that whilst developing as nymphs had regularly dropped to the ground following dislodgment from their host plant. Using a microcosm approach, in a replicated and balanced laboratory experiment, we caused aphid dropping behaviour by tapping the plants on which they were feeding. Results. The results demonstrated that disturbance by dropping behaviour increased nymphal development time and reduced their subsequent reproductive capacity as adults. Discussion. We conclude that dropping behaviour had a strong negative effect on the development of nymphs and their subsequent reproductive capacity. This implies that the physiological cost of such a behaviour choice is substantial, and that such avoidance strategies require a trade-off which reduces the capacity of a population to increase.

4.
Zookeys ; (532): 15-53, 2015.
Article in English | MEDLINE | ID: mdl-26692805

ABSTRACT

A taxonomic review of the genus Ceresium (Coleoptera: Cerambycidae) found within the Fiji Islands is presented. A total of 17 species is treated. Full morphological descriptions and comparative images of each species are included, along with a dichotomous key for their identification.

5.
PLoS One ; 9(9): e106822, 2014.
Article in English | MEDLINE | ID: mdl-25268240

ABSTRACT

An understanding of spatial and temporal processes in agricultural ecosystems provides a basis for rational decision-making with regards to the management and husbandry of crops, supporting the implementation of integrated farming strategies. In this study we investigated the spatial and temporal distribution of aphid pests (Sitobion avenae and Metopolophium dirhodum) within winter wheat fields. Using an intensive sampling programme we investigated distributions at both the small (single shoot) and large (field) scales. Within two fields, a grid with 82 locations was established (area 120 m by 168 m). At each location, 25 shoots were individually marked and aphid counts by observation conducted on 21 and 22 occasions as the crop matured, resulting in 43,050 and 45,100 counts being conducted in the two fields respectively. We quantified field scale spatial distributions, demonstrating that spatial pattern generally emerged, with temporal stability being both species- and field- dependent. We then measured turnover of colonies at the small (individual shoot) and large (field) scales by comparing consecutive pairs of sampling occasions. Four turnover categories were defined: Empty (no aphids recorded on either occasion); Colonised (aphids recorded on the second occasion but not the first); Extinction (aphids recorded on the first occasion but not the second); Stable (aphids recorded on both occasions). At the field scale, population stability soon established, but, at the small scale there was a consistently high proportion of unoccupied shoots with considerable colonisation and extinction and low stability. The redistribution of aphids within the crop at the local scale is a vulnerability which could be used to disrupt population development--by mediating exposure to ground-active natural enemies and by incurring a metabolic cost caused by the physiological demands to re-establish on a nearby host plant.


Subject(s)
Aphids/physiology , Triticum/parasitology , Animal Distribution , Animals , Plant Diseases/parasitology , Plant Shoots/parasitology , Population Dynamics
6.
Brief Bioinform ; 14(5): 575-88, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23677899

ABSTRACT

There is much interest in using high-throughput DNA sequencing methodology to monitor microorganisms, complex plant and animal communities. However, there are experimental and analytical issues to consider before applying a sequencing technology, which was originally developed for genome projects, to ecological projects. Many of these issues have been highlighted by recent microbial studies. Understanding how high-throughput sequencing is best implemented is important for the interpretation of recent results and the success of future applications. Addressing complex biological questions with metagenomics requires the interaction of researchers who bring different skill sets to problem solving. Educators can help by nurturing a collaborative interdisciplinary approach to genome science, which is essential for effective problem solving. Educators are in a position to help students, teachers, the public and policy makers interpret the new knowledge that metagenomics brings. To do this, they need to understand, not only the excitement of the science but also the pitfalls and shortcomings of methodology and research designs. We review these issues and some of the research directions that are helping to move the field forward.


Subject(s)
Environmental Monitoring/statistics & numerical data , High-Throughput Nucleotide Sequencing/statistics & numerical data , Algorithms , Animals , Computational Biology/education , Databases, Genetic/statistics & numerical data , Ecosystem , Metagenomics/statistics & numerical data , Software
7.
PLoS One ; 8(1): e53842, 2013.
Article in English | MEDLINE | ID: mdl-23349751

ABSTRACT

This study investigated the effect of the presence of introduced mongoose, environmental quality and habitat on the distribution of native and endemic birds on 16 small islands within Fiji. In total, 9055 birds representing 45 species were observed within four key habitats (forest, villages, crop land and coastal vegetation) on the 16 islands, half of which had mongoose present. Previous studies attribute bird declines and extirpation anecdotally to the mongoose. The presence of mongoose, environmental quality and habitat type had a measurable influence on observed extant native and endemic bird communities. We conclude that three ground birds; Gallirallus phillipensis, Anas supericiliosa and Porphyrio porhyrio were negatively influenced by the presence of mongoose and that Ptilinopus perousii, Phigys solitarius, Chrysoenas victor, Ducula latrans, Clytorhyrchus vitiensis, Pachycephala pectoralis, Prospeia tabunesis, and Foulehaio carunculata were particularly dependent on good quality forest habitat. Conservation priorities in relation to protecting Fiji's endemic birds from the effect of mongoose are discussed and preventative measures suggested.


Subject(s)
Birds , Herpestidae , Introduced Species/statistics & numerical data , Animals , Fiji
8.
Mol Ecol ; 17(7): 1828-39, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18284569

ABSTRACT

Spatially explicit predator-prey interactions can alter the predatory potential of natural enemies augmented through conservation biological control. To test hypotheses regarding such interactions and predatory efficiency, we used a combination of molecular techniques and mark-release-recapture to study the foraging behaviour of a generalist carabid predator, Poecilus cupreus, in response to spatial patterns of its cereal aphid prey (Metapolophium dirhodum and Sitobion avenae). Beetle and aphid numbers were measured across two grids of sampling locations, within which aphid spatial pattern had been manipulated to generate patchy and more homogenous distributions. Aphid consumption was measured by enzyme-linked immunosorbent assays (ELISA) of beetle gut contents, using an aphid-specific monoclonal antibody. Movement and distribution patterns suggest that P. cupreus does not aggregate at, nor instigate prey-taxis within, aphid patches. However, more than two-thirds of the 2169 P. cupreus tested by ELISA had consumed aphids and the proportion of beetles containing aphid proteins was positively related to aphid density. Against expectation, the proportion of predators feeding on aphids was greatest where prey were homogenously distributed, and this was attributed to the loss of partial refuges for prey in aphid patches. The functional value of this type of uniform foraging strategy is ideally suited to early colonization of the crop habitat, when aphid numbers are low, before populations build up and form strong spatial patterns.


Subject(s)
Aphids/physiology , Coleoptera/physiology , Predatory Behavior , Animals , Antibodies, Monoclonal/immunology , Enzyme-Linked Immunosorbent Assay , Gastrointestinal Contents , Population Density
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