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1.
Hum Vaccin Immunother ; 16(2): 436-444, 2020.
Article in English | MEDLINE | ID: mdl-31361179

ABSTRACT

Including dental health providers in human papillomavirus (HPV) vaccination could reduce rising rates in HPV-associated oropharyngeal cancer (HPV-OPC). This study assessed Utah dentists' perspectives on providing HPV vaccination education and services in the dental setting. A cross-sectional, 70-item self-administered survey was conducted among a convenience sample of N = 203 practicing Utah dentists. Statistical analyses included Chi Square tests of independence, scaled scores and Cronbach's alpha coefficients. Majority of Utah dentists surveyed perceived that discussing the link between HPV and OPC and recommending the HPV vaccine is within their scope of practice, but not administration of the HPV vaccine. Dentists with >10 minutes of patient education per week were less likely to be concerned about the cultural, social norms or religious ideology of discussing HPV with their patients (p = .024). Rural dentists were more concerned about the safety and liability of the HPV vaccine (p = .011). Good internal consistency was observed survey items regarding barriers and willing to engage in HPV vaccination practices. Dental providers were interested in HPV training and patient education brochures as strategies, but less interested in administering the HPV vaccine. Dental associations support dentists' engagement in HPV education and HPV-OPC prevention. This is the first study in Utah to examine dentists' perspectives on HPV vaccination. Findings have implications for program planning, intervention development, and future research.


Subject(s)
Alphapapillomavirus , Papillomavirus Infections , Papillomavirus Vaccines , Cross-Sectional Studies , Dentists , Health Knowledge, Attitudes, Practice , Humans , Papillomavirus Infections/prevention & control , Surveys and Questionnaires , Utah , Vaccination
2.
Photochem Photobiol Sci ; 17(1): 27-34, 2018 Jan 17.
Article in English | MEDLINE | ID: mdl-29143029

ABSTRACT

The products from the 193 nm irradiation of triphenylsulfonium nonaflate (TPS) embedded in a poly(methyl methacrylate) (PMMA) film have been characterized. The analysis of the photoproduct formation was performed using chromatographic techniques including HPLC, GPC and GC-MS as well as UV-vis and NMR spectroscopic methods. Two previously unreported TPS photoproducts, triphenylene and dibenzothiophene, were detected; additionally, GPC and DOSY-NMR spectroscopic analyses after irradiation suggested that TPS fragments had been incorporated into the polymer film. The irradiation of acetonitrile solutions containing 10% w/v PMMA and 1% w/v TPS in a 1 cm-path-length cuvette showed only a trace amount of triphenylene or dibenzothiophene, indicating that topochemical factors were important for the formation of these molecules. The accumulated evidence indicates that both products were formed by in-cage, secondary photochemical reactions: 2-(phenylthio)biphenyl to triphenylene, and diphenylsulfide to dibenzothiophene.

3.
J Am Chem Soc ; 123(47): 11623-31, 2001 Nov 28.
Article in English | MEDLINE | ID: mdl-11716717

ABSTRACT

Rates of reduction of Os(III), Ru(III), and Re(I) by Cu(I) in His83-modified Pseudomonas aeruginosa azurins (M-Cu distance approximately 17 A) have been measured in single crystals, where protein conformation and surface solvation are precisely defined by high-resolution X-ray structure determinations: 1.7(8) x 10(6) s(-1) (298 K), 1.8(8) x 10(6) s(-1) (140 K), [Ru(bpy)2(im)(3+)-]; 3.0(15) x 10(6) s(-1) (298 K), [Ru(tpy)(bpy)(3+)-]; 3.0(15) x 10(6) s(-1) (298 K), [Ru(tpy)(phen)(3+)-]; 9.0(50) x 10(2) s(-1) (298 K), [Os(bpy)2(im)(3+)-]; 4.4(20) x 10(6) s(-1) (298 K), [Re(CO)3(phen)(+)] (bpy = 2,2'-bipyridine; im = imidazole; tpy = 2,2':6',2' '-terpyridine; phen = 1,10-phenanthroline). The time constants for electron tunneling in crystals are roughly the same as those measured in solution, indicating very similar protein structures in the two states. High-resolution structures of the oxidized (1.5 A) and reduced (1.4 A) states of Ru(II)(tpy)(phen)(His83)Az establish that very small changes in copper coordination accompany reduction but reveal a shorter axial interaction between copper and the Gly45 peptide carbonyl oxygen [2.6 A for Cu(II)] than had been recognized previously. Although Ru(bpy)2(im)(His83)Az is less solvated in the crystal, the reorganization energy for Cu(I) --> Ru(III) electron transfer falls in the range (0.6-0.8 eV) determined experimentally for the reaction in solution. Our work suggests that outer-sphere protein reorganization is the dominant activation component required for electron tunneling.


Subject(s)
Azurin/chemistry , Pseudomonas aeruginosa/metabolism , Azurin/metabolism , Binding Sites , Copper/chemistry , Copper/metabolism , Crystallization , Crystallography, X-Ray , Electron Transport , Models, Molecular , Osmium/chemistry , Osmium/metabolism , Oxidation-Reduction , Protein Conformation , Pseudomonas aeruginosa/chemistry , Rhenium/chemistry , Rhenium/metabolism , Ruthenium/chemistry , Ruthenium/metabolism
4.
Proc Natl Acad Sci U S A ; 98(14): 7760-4, 2001 Jul 03.
Article in English | MEDLINE | ID: mdl-11438728

ABSTRACT

Reduced (Fe(II)) Rhodopseudomonas palustris cytochrome c' (Cyt c') is more stable toward unfolding ([GuHCl](1/2) = 2.9(1) M) than the oxidized (Fe(III)) protein ([GuHCl](1/2) = 1.9(1) M). The difference in folding free energies (Delta Delta G(f) degrees = 70 meV) is less than half of the difference in reduction potentials of the folded protein (100 mV vs. NHE) and a free heme in aqueous solution ( approximately -150 mV). The spectroscopic features of unfolded Fe(II)-Cyt c' indicate a low-spin heme that is axially coordinated to methionine sulfur (Met-15 or Met-25). Time-resolved absorption measurements after CO photodissociation from unfolded Fe(II)(CO)-Cyt c' confirm that methionine can bind to the ferroheme on the microsecond time scale [k(obs) = 5(2) x 10(4) s(-1)]. Protein folding was initiated by photoreduction (two-photon laser excitation of NADH) of unfolded Fe(III)-Cyt c' ([GuHCl] = 2.02--2.54 M). Folding kinetics monitored by heme absorption span a wide time range and are highly heterogeneous; there are fast-folding ( approximately 10(3) s(-1)), intermediate-folding (10(2)-10(1) s(-1)), and slow-folding (10(-1) s(-1)) populations, with the last two likely containing methionine-ligated (Met-15 or Met-25) ferrohemes. Kinetics after photoreduction of unfolded Fe(III)-Cyt c' in the presence of CO are attributable to CO binding [1.4(6) x 10(3) s(-1)] and Fe(II)(CO)-Cyt c' folding [2.8(9) s(-1)] processes; stopped-flow triggered folding of Fe(III)-Cyt c' (which does not contain a protein-derived sixth ligand) is adequately described by a single kinetics phase with an estimated folding time constant of approximately 4 ms [Delta G(f) degrees = -33(3) kJ mol(-1)] at zero denaturant.


Subject(s)
Cytochrome c Group/chemistry , Cytochrome c Group/metabolism , Electron Transport , Protein Folding , Rhodopseudomonas/metabolism , Structure-Activity Relationship
5.
7.
Proc Natl Acad Sci U S A ; 98(9): 5002-6, 2001 Apr 24.
Article in English | MEDLINE | ID: mdl-11296248

ABSTRACT

The current understanding of electron tunneling through proteins has come from work on systems where donors and acceptors are held at fixed distances and orientations. The factors that control electron flow between proteins are less well understood, owing to uncertainties in the relative orientations and structures of the reactants during the very short time that tunneling occurs. As we report here, the way around such structural ambiguity is to examine oxidation-reduction reactions in protein crystals. Accordingly, we have measured and analyzed the kinetics of electron transfer between native and Zn-substituted tuna cytochrome c (cyt c) molecules in crystals of known structure. Electron transfer rates [(320 s(-1) for *Zn-cyt c --> Fe(III)-cyt c; 2000 s(-1) for Fe(II)-cyt c --> Zn-cyt c(+))] over a Zn-Fe distance of 24.1 A closely match those for intraprotein electron tunneling over similar donor-acceptor separations. Our results indicate that van der Waals interactions and water-mediated hydrogen bonds are effective coupling elements for tunneling across a protein-protein interface.


Subject(s)
Cytochrome c Group/chemistry , Cytochrome c Group/metabolism , Electron Transport , Animals , Crystallization , Crystallography, X-Ray , Electrons , Heme/chemistry , Heme/metabolism , Hydrogen Bonding , Iron/metabolism , Kinetics , Models, Molecular , Oxidation-Reduction , Protein Conformation , Solvents , Tuna , Water/metabolism , Zinc/metabolism
8.
J Inorg Biochem ; 81(3): 221-8, 2000 Aug 31.
Article in English | MEDLINE | ID: mdl-11051567

ABSTRACT

Molecules with photosensitizers attached to substrates (Wilker et al., Angew. Chem. Int. Ed. 38 (1999) 90-92) or cofactors (Hamachi et al., J. Am. Chem. Soc. 121 (1999) 5500-5506) can rapidly deliver redox equivalents to buried active sites. The structure of cytochrome P450cam (P450) co-crystallized with a prototypal sensitizer-substrate, [Ru-C9-Ad]Cl2, has been determined (Dmochowski et al., Proc. Natl. Acad. Sci. USA 96 (1999) 12987-12990); and, in separate UV-vis absorption and time-resolved luminescence experiments, the binding of the lambda and delta enantiomers of Ru-C9-Ad to P450 has been measured. The results, KD(delta/lambda) approximately 2, indicate that the bipyridyl ligands of the lambda isomer interact more favorably with hydrophobic residues at the entrance to the substrate channel. We conclude that enantiospecific interactions may be exploited in the design of enzyme-metallosubstrate conjugates.


Subject(s)
Camphor 5-Monooxygenase/chemistry , Camphor 5-Monooxygenase/metabolism , Ruthenium/chemistry , Binding Sites , Circular Dichroism , Crystallography, X-Ray , Escherichia coli/metabolism , Isomerism , Kinetics , Magnetic Resonance Spectroscopy , Models, Chemical , Models, Molecular , Oxidation-Reduction , Plasmids/metabolism , Spectrophotometry , Time Factors , Ultraviolet Rays
9.
Curr Opin Chem Biol ; 4(2): 192-8, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10742192

ABSTRACT

Long-range electronic interactions between electron donors and acceptors in proteins depend on the structure of the intervening polypeptide. Several methods have been developed for calculating these weak couplings. New challenges in protein electron-transfer research include identifying the role of protein dynamics, and characterizing multistep tunneling over very long distances.


Subject(s)
Electron Transport , Proteins/chemistry , Proteins/metabolism , Animals , Electron Transport Complex IV/chemistry , Electron Transport Complex IV/metabolism , Electrons , Models, Molecular , Protein Conformation
10.
Proc Natl Acad Sci U S A ; 96(23): 12987-90, 1999 Nov 09.
Article in English | MEDLINE | ID: mdl-10557259

ABSTRACT

The ability to detect, characterize, and manipulate specific biomolecules in complex media is critical for understanding metabolic processes. Particularly important targets are oxygenases (cytochromes P450) involved in drug metabolism and many disease states, including liver and kidney dysfunction, neurological disorders, and cancer. We have found that Ru photosensitizers linked to P450 substrates specifically recognize submicromolar cytochrome P450(cam) in the presence of other heme proteins. In the P450:Ru-substrate conjugates, energy transfer to the heme dramatically accelerates the Ru-luminescence decay. The crystal structure of a P450(cam):Ru-adamantyl complex reveals access to the active center via a channel whose depth (Ru-Fe distance is 21 A) is virtually the same as that extracted from an analysis of the energy-transfer kinetics. Suitably constructed libraries of sensitizer-linked substrates could be employed to probe the steric and electronic properties of buried active sites.


Subject(s)
Camphor 5-Monooxygenase/metabolism , Camphor 5-Monooxygenase/chemistry , Camphor 5-Monooxygenase/genetics , Energy Transfer , Models, Chemical , Molecular Sequence Data , Mutagenesis , Optics and Photonics , Substrate Specificity
11.
Proc Natl Acad Sci U S A ; 96(12): 6587-90, 1999 Jun 08.
Article in English | MEDLINE | ID: mdl-10359755

ABSTRACT

Ferrocytochrome b562 [Fe(II)cyt b562] folding can be triggered by photoinduced electron transfer to unfolded Fe(III)cyt b562 in 2-3 M guanidine hydrochloride solutions. The folding rates increase with decreasing guanidine hydrochloride; the extrapolated time constant for this folding process in the absence of denaturant (5 micros) is near the predicted value for intrachain diffusion. The relatively smooth energy landscape indicated for Fe(II)cyt b562 folding accords with the helical, highly symmetrical structure of the protein.


Subject(s)
Cytochrome b Group/chemistry , Electron Transport , Escherichia coli Proteins , Protein Folding , Escherichia coli
12.
Biochemistry ; 38(6): 1944-9, 1999 Feb 09.
Article in English | MEDLINE | ID: mdl-10026276

ABSTRACT

The ligand substitutions that occur during the folding of ferrocytochrome c [Fe(II)cyt c] have been monitored by transient absorption spectroscopy. The folding reaction was triggered by photoinduced electron transfer to unfolded Fe(III)cyt c in guanidine hydrochloride (GuHCl) solutions. Assignments of ligation states were made by reference to the spectra of the imidazole and methionine adducts of N-acetylated microperoxidase 8. At pH 7, the heme in unfolded Fe(II)cyt c is ligated by native His18 and HisX (X = 26, 33) residues. The native Met80 ligand displaces HisX only in the last stages of folding. The ferroheme is predominantly five-coordinate in acidic solution; it remains five-coordinate until the native methionine binds the heme to give the folded protein (the rate of the methionine binding step is 16 +/- 5 s-1 at pH 5, 3.2 M GuHCl). The evidence suggests that the substitution of histidine by methionine is strongly coupled to backbone folding.


Subject(s)
Cytochrome c Group/chemistry , Protein Folding , Animals , Histidine/chemistry , Horses , Hydrogen-Ion Concentration , Imidazoles/chemistry , Kinetics , Ligands , Methionine/chemistry , Models, Molecular , Oligopeptides/chemistry , Peroxidases/chemistry , Spectrum Analysis
13.
Biochim Biophys Acta ; 1388(2): 437-43, 1998 Nov 10.
Article in English | MEDLINE | ID: mdl-9858778

ABSTRACT

Electrochemical measurements show that there are high-potential states of two copper proteins, Pseudomonas aeruginosa azurin and Thermus thermophilus CuA domain; these perturbed states are formed in guanidine hydrochloride (GuHCl) solution in which the proteins are still blue (azurin) and purple (CuA). In each case, the high-potential state forms reversibly. Absorption (azurin, CuA), visible circular dichroism (azurin, CuA), resonance-Raman (CuA), and EPR (CuA) spectra indicate that the structure of the oxidized copper site of each high-potential form is very similar to that of the native protein. It is proposed that GuHCl perturbs one or more H-bonds in the blue or purple copper active site, thereby allowing Cu(I) to adopt a more favorable coordination structure than that in the rigid cavity of the native protein.


Subject(s)
Azurin/chemistry , Copper/chemistry , Electron Transport Complex IV/chemistry , Pseudomonas aeruginosa/chemistry , Thermus thermophilus/chemistry , Bacterial Proteins/chemistry , Circular Dichroism , Electrochemistry , Electron Spin Resonance Spectroscopy , Guanidine/pharmacology , Hydrogen Bonding , Metalloproteins/chemistry , Molecular Structure , Oxidation-Reduction , Protein Denaturation , Protein Folding , Spectrophotometry , Spectrum Analysis, Raman
14.
J Bioenerg Biomembr ; 30(1): 35-9, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9623803

ABSTRACT

Warburg showed in 1929 that the photochemical action spectrum for CO dissociation from cytochrome c oxidase is that of a heme protein. Keilin had shown that cytochrome a does not react with oxygen, so he did not accept Warburg's view until 1939, when he discovered cytochrome a3. The dinuclear cytochrome a3-CuB unit was found by EPR in 1967, whereas the dinuclear nature of the CuA site was not universally accepted until oxidase crystal structures were published in 1995. There are negative redox interactions between cytochrome a and the other redox sites in the oxidase, so that the reduction potential of a particular site depends on the redox states of the other sites. Calculated electron-tunneling pathways for internal electron transfer in the oxidase indicate that the coupling-limited rates are 9 x 10(5) (CuA-->a) and 7 x 10(6) s(-1) (a-->a3); these calculations are in reasonable agreement with experimental rates, after corrections are made for driving force and reorganization energy. The best CuA-a pathway starts from the ligand His204 and not from the bridging sulfur of Cys196, and an efficient a-a3 path involves the heme ligands His378 and His376 as well as the intervening Phe377 residue. All direct paths from CuA to a3 are poor, indicating that direct CuA-->a3 electron transfer is much slower than the CuA-->a reaction. The pathways model suggests a means for gating the electron flow in redox-linked proton pumps.


Subject(s)
Electron Transport Complex IV/metabolism , Animals , Electron Transport , Humans , Protons
15.
Biochemistry ; 37(9): 3172-7, 1998 Mar 03.
Article in English | MEDLINE | ID: mdl-9485471

ABSTRACT

The unfolding of the CuA domain of cytochrome oxidase from the thermophilic bacterium Thermus thermophilus, induced by guanidine hydrochloride (GuHCl)1 at different temperatures, has been monitored by CD as well by electronic absorption (with the oxidized protein) and by fluorescence (with the reduced protein). The same unfolding curves were obtained with the different methods, providing evidence for a two-state model for the unfolding equilibrium. This was also supported by the shape of the unfolding equilibrium curves and by the observed refolding of the unfolded, oxidized protein on dilution of the denaturant. The oxidized protein cannot be unfolded by GuHCl at room temperature, and it was found to be thermally very stable as well, since, even in the presence of 7 M GuHCl, it is not fully unfolded until above 80 degrees C. For the reduced protein at room temperature, the unfolding equilibrium curve yielded a folding free energy of -65 kJ/mol. The corresponding value for the oxidized protein (-85 kJ/mol) could be estimated indirectly from a thermodynamic cycle connecting the folded and unfolded forms in both oxidation states and the known reduction potentials of the metal site in the folded and unfolded states; the potential is increased on unfolding, consistent with the higher folding stability of the oxidized form. The difference in folding stability between the oxidized and reduced proteins (20 kJ/mol) is exceptionally high, and this is ascribed to the unique structure of the dinuclear CuA site. The unfolded, reduced protein was found to refold partially on oxidation with ferricyanide.


Subject(s)
Copper , Electron Transport Complex IV/chemistry , Protein Folding , Electron Transport , Ferricyanides , Lasers , Oxidation-Reduction , Thermodynamics , Thermus thermophilus/enzymology
16.
Clin Oral Implants Res ; 8(3): 198-207, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9586464

ABSTRACT

The aim of this study was to evaluate the effect of deproteinized bovine bone graft material on new bone formation in a guided bone regeneration model system. In 20 rabbits, a periosteal skin flap was raised uncovering the calvaria. A form stable hemispherical dome made of poly-lactic acid (PLA) was placed onto the roughened calvaria. Prior to placement, the dome was either filled with peripheral blood alone (control group, 8 rabbits), or with blood and OsteoGraf/N-300 (test group, 12 rabbits). The wound was closed for primary healing. Morphometric assessment of 1- and 2-month undecalcified histologic specimens revealed better tissue fill in the test domes at 1 month (test 99%, control 55%) (P < 0.05) and 2 months (t, 100%; c, 82%). The fraction of the new bone within the regenerated tissue was higher in the test specimens at 1 month (t, 22%; c, 12%) (P < 0.05) and 2 months (t, 34%; c, 24%). The fraction of the entire space underneath the domes occupied by bone was higher in the test at 1 month, but higher in the controls at 2 months. The fraction of the bone substitute material in contact with bone increased from 1 month (34% +/- 14) to 2 months (45% +/- 5). The surface fraction of osteoblast layers was tendentially higher in the test at 1 month but higher in the control specimens at 2 months. In both test and control, initially woven bone was formed which underwent subsequent remodeling. Cellular degradation of the deproteinized bone graft was frequently detected. It is concluded that deproteinized bovine bone mineral has osteoconductive properties and can initially accelerate new bone formation during guided bone regeneration by increased recruitment of osteoblasts.


Subject(s)
Bone Regeneration , Bone Substitutes , Bone Transplantation/methods , Guided Tissue Regeneration/methods , Animals , Bone Demineralization Technique , Cattle , Lactic Acid , Osteogenesis , Polyesters , Polymers , Rabbits , Skull/surgery
17.
Clin Oral Implants Res ; 8(2): 75-81, 1997 Apr.
Article in English | MEDLINE | ID: mdl-9758957

ABSTRACT

The aim of the present study was to evaluate the effect of natural deproteinized bone mineral on the temporal and spatial pattern of bone formation in a guided bone regeneration model system while using a bioresorbable membrane device. A periosteal skin flap was raised uncovering the calvaria of 20 rabbits. A stiff hemispherical dome made of polylactic acid was placed onto the roughened calvaria and anchored by screws. Prior to placement, the dome was either filled with peripheral blood (control group, 8 rabbits) or with blood and OsteoGraf/N-300 (test group, 12 rabbits). At 1 month, histologic sections revealed bone regeneration in both test and control domes to various degrees. In the test domes, bone height reached 78% (67-83) and bone volume was 11% (6-17), while in the control domes, bone height was 45% (14-67) and bone volume 6% (1-11). At 2 months, bone height was unchanged in the test group at 70% (67-83) and bone volume had only slightly increased to 16% (11-21). In the controls, height increased to 86% (60-100) and volume to 20% (9-27). Thus, in this model system, natural bone mineral fill contributed to accelerate initial bone neogenesis, while it did not contribute to increasing bone volume or bone height at later observation stages.


Subject(s)
Bone Regeneration , Bone Substitutes , Guided Tissue Regeneration/methods , Membranes, Artificial , Animals , Biodegradation, Environmental , Blood , Bone Transplantation/methods , Cattle , Lactic Acid , Polyesters , Polymers , Rabbits , Skull , Statistics, Nonparametric
18.
Proc Natl Acad Sci U S A ; 94(9): 4246-9, 1997 Apr 29.
Article in English | MEDLINE | ID: mdl-9113974

ABSTRACT

Experimental data for the unfolding of cytochrome c and azurin by guanidinium chloride (GuHCl) are used to construct free-energy diagrams for the folding of the oxidized and reduced proteins. With cytochrome c, the driving force for folding the reduced protein is larger than that for the oxidized form. Both the oxidized and the reduced folded forms of yeast cytochrome c are less stable than the corresponding states of the horse protein. Due to the covalent attachment of the heme and its fixed tetragonal coordination geometry, cytochrome c folding can be described by a two-state model. A thermodynamic cycle leads to an expression for the difference in self-exchange reorganization energies for the folded and unfolded proteins. The reorganization energy for electron exchange in the folded protein is approximately 0.5 eV smaller than that for a heme in aqueous solution. The finding that reduced azurin unfolds at lower GuHCl concentrations than the oxidized protein suggests that the coordination structure of copper is different in oxidized and reduced unfolded states: it is likely that the geometry of CuI in the unfolded protein is linear or trigonal, whereas CuII prefers to be tetragonal. The evidence indicates that protein folding lowers the azurin reorganization energy by roughly 1.7 eV relative to an aqueous Cu(1, 10-phenanthroline)22+/+ reference system.


Subject(s)
Azurin/chemistry , Cytochrome c Group/chemistry , Metalloproteins/chemistry , Protein Folding , Binding Sites , Models, Chemical , Oxidation-Reduction , Thermodynamics
19.
Science ; 274(5287): 629a, 1996 Oct 25.
Article in English | MEDLINE | ID: mdl-17759699
20.
Chem Biol ; 3(6): 491-7, 1996 Jun.
Article in English | MEDLINE | ID: mdl-8807879

ABSTRACT

BACKGROUND: Experimental and theoretical studies of protein folding suggest that the free-energy change associated with the folding process is a primary factor in determining folding rates. We have recently developed a photochemical electron-transfer-triggering method to study protein-folding kinetics over a wide range of folding free energies. Here, we have used this technique to investigate the relationship between folding rate and free-energy change using cytochromes c from horse (h-cyt c) and yeast (y-cyt c), which have similar backbone folds but different amino-acid sequences and, consequently, distinct folding energies. RESULTS: The folding free energies for oxidized and reduced h-cyt c and y-cyt c are linear functions of the denaturant (guanidine hydrochloride) concentration, but the concentration required to unfold half of the protein is 1.5 M lower for y-cyt c. We measured the folding rates of reduced h-cyt c and y-cyt c over a range of guanidine hydrochloride concentrations at two temperatures. When driving forces are matched at the appropriate denaturant concentrations, the two homologs have comparable folding rates. The activation free energies for folding h-cyt c and y-cyt c are linearly dependent on the folding free energies. The slopes of these lines are similar (approximately 0.4) for the two proteins, suggesting an early transition state along the folding reaction coordinate. CONCLUSIONS: The free-energy relationships found for h-cyt c and y-cyt c folding kinetics imply that the height of the barrier to folding depends upon the relative stabilities of the unfolded and folded states. The striking correspondence in rate/free-energy profiles for h-cyt c and y-cyt c suggests that, despite low sequence homology, they follow similar folding pathways.


Subject(s)
Cytochrome c Group/chemistry , Animals , Electron Transport , Horses , Kinetics , Myocardium/enzymology , Protein Folding
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