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1.
Schweiz Arch Tierheilkd ; 165(11): 707-715, 2023 Nov.
Article in German | MEDLINE | ID: mdl-37905572

ABSTRACT

INTRODUCTION: SCC (squamous cell carinomas) are among the most common eye neoplasms in horses. In recent studies Haflinger horses with a homozygous genotype for a missense variant in the DDB2 gene (damage specific DNA binding protein 2) had a significant increased risk of developing ocular SCC. The aims of this study were to determine the frequency of the SCC-associated risk allele in the DDB2 gene in Swiss and Austrian Haflinger populations and to validate the previously described phenotypic correlation. For this purpose, Haflingers presented at various horse clinics in Switzerland (n = 21, including 11 SCC cases), privately kept Haflingers (n = 52, including 1 SCC case), and Haflingers from a stud farm in the Austrian Tyrol (n = 53) were recruited. The individual DDB2 genotype of the animals was determined using a polymerase chain ceaction (PCR) test using hair follicle or whole blood samples. Of the 12 horses suffering from SCC, nine had ocular SCC and three had non-ocular SCC. Six of the nine Haflingers with ocular SCC and one of the three Haflingers with non-ocular SCC were homozygous for the DDB2 variant. Of the 113 clinically normal animals, 7/113 were homozygous (6 %) and 42/113 were heterozygous (37 %), which corresponds to an allele frequency of 24,8 % in the control cohort. The risk of ocular SCC occurring in Haflingers is significantly increased with the homozygous DDB2 genotype. However, not all animals with SCC carry this gene variant and not all DDB2 homozygous animals develop SCC, which can be explained by the multifactorial genesis of the disease. Due to the high frequency of the undesirable allele, we recommend taking the individual DDB2 genotype of breeding animals into account in order to avoid homozygous offspring with a greatly increased SCC risk by excluding high-risk matings.


INTRODUCTION: Les carcinomes épidermoïdes (CE) sont parmi les néoplasmes oculaires les plus fréquents chez les chevaux. Des études récentes ont montré que les chevaux Haflinger présentant un génotype homozygote pour un variant faux-sens dans le gène DDB2 (damage specific DNA binding protein 2) avaient un risque significativement plus élevé de développer un CE oculaire. Les objectifs de cette étude étaient de déterminer la fréquence de l'allèle à risque associé au CE dans le gène DDB2 dans les populations suisses et autrichiennes de Haflinger et de valider la corrélation phénotypique décrite précédemment. Pour ce faire, des Haflingers présentés dans différentes cliniques équines en Suisse (n = 21, dont 11 cas de CE), des Haflingers privés (n = 52, dont 1 cas de CE) et des Haflingers d'un haras du Tyrol autrichien (n = 53) ont été recrutés. Le génotype DDB2 individuel des animaux a été déterminé à l'aide d'un test de réaction en chaîne par polymérase (PCR) utilisant des échantillons de follicules pileux ou de sang total. Sur les 12 chevaux souffrant de CE, neuf avaient un CE oculaire et trois un CE non oculaire. Six des neuf Haflingers atteints de CE oculaire et un des trois Haflingers atteints de CE non oculaire étaient homozygotes pour la variante DDB2. Sur les 113 animaux cliniquement normaux, 7/113 étaient homozygotes (6 %) et 42/113 étaient hétérozygotes (37 %), ce qui correspond à une fréquence d'allèle de 24,8 % dans la cohorte de contrôle. Le risque de CE oculaire chez les Haflingers augmente de manière significative avec le génotype DDB2 homozygote. Cependant, tous les animaux atteints de CE ne sont pas porteurs de cette variante génétique et tous les animaux homozygotes DDB2 ne développent pas de CE, ce qui peut s'expliquer par la genèse multifactorielle de la maladie. En raison de la fréquence élevée de l'allèle indésirable, nous recommandons de tenir compte du génotype DDB2 individuel des animaux reproducteurs afin d'éviter une progéniture homozygote présentant un risque fortement accru de CE en excluant les accouplements à haut risque.


Subject(s)
Carcinoma, Squamous Cell , Eye Neoplasms , Horse Diseases , Humans , Animals , Horses , Genotype , Incidence , Carcinoma, Squamous Cell/epidemiology , Carcinoma, Squamous Cell/genetics , Carcinoma, Squamous Cell/veterinary , DNA-Binding Proteins/genetics , Eye Neoplasms/epidemiology , Eye Neoplasms/genetics , Eye Neoplasms/veterinary , Horse Diseases/epidemiology , Horse Diseases/genetics
2.
Nanotechnology ; 25(41): 415705, 2014 Oct 17.
Article in English | MEDLINE | ID: mdl-25249347

ABSTRACT

Superionic materials are multi-component solids in which one sub-lattice exhibits high ionic conductivity within a fixed crystalline structure. This is typically associated with a structural phase transition occurring significantly above room temperature. Here, through combined temperature-resolved x-ray diffraction and differential scanning calorimetry, we map out the nanoscale size-dependence of the Ag2Se tetragonal to superionic phase transition temperature and determine the threshold size for room-temperature stabilization of superionic Ag2Se. For the first time, clear experimental evidence for such stabilization of the highly ionic conducting phase at room temperature is obtained in ∼2 nm diameter spheres, which corresponds to a >100 °C suppression of the bulk phase transition temperature. This may enable technological applications of Ag2Se in devices where high ionic conductivity at room temperature is required.

3.
Struct Dyn ; 1(3): 034301, 2014 May.
Article in English | MEDLINE | ID: mdl-26798776

ABSTRACT

We report measurements of the transient structural response of weakly photo-excited thin films of BiFeO3, Pb(Zr,Ti)O3, and Bi and time-scales for interfacial thermal transport. Utilizing picosecond x-ray diffraction at a 1.28 MHz repetition rate with time resolution extending down to 15 ps, transient changes in the diffraction angle are recorded. These changes are associated with photo-induced lattice strains within nanolayer thin films, resolved at the part-per-million level, corresponding to a shift in the scattering angle three orders of magnitude smaller than the rocking curve width and changes in the interlayer lattice spacing of fractions of a femtometer. The combination of high brightness, repetition rate, and stability of the synchrotron, in conjunction with high time resolution, represents a novel means to probe atomic-scale, near-equilibrium dynamics.

4.
Nat Commun ; 4: 1369, 2013.
Article in English | MEDLINE | ID: mdl-23340409

ABSTRACT

Superionic materials are multi-component solids with simultaneous characteristics of both a solid and a liquid. Above a critical temperature associated with a structural phase transition, they exhibit liquid-like ionic conductivities and dynamic disorder within a rigid crystalline structure. Broad applications as electrochemical storage materials and resistive switching devices follow from this abrupt change in ionic mobility, but the microscopic pathways and speed limits associated with this switching process are largely unknown. Here we use ultrafast X-ray spectroscopy and scattering techniques to obtain an atomic-level, real-time view of the transition state in copper sulphide nanocrystals. We observe the transformation to occur on a twenty picosecond timescale and show that this is determined by the ionic hopping time.

5.
Ned Tijdschr Geneeskd ; 151(38): 2105-10, 2007 Sep 22.
Article in Dutch | MEDLINE | ID: mdl-17948827

ABSTRACT

OBJECTIVE: To examine the relationship between the number of procedures performed per hospital or per surgeon and health care outcomes. DESIGN: Literature review. METHOD: Relevant literature was identified using recent systematic reviews from Germany, England, France and the United States. The Cochrane Library, Medline and Embase were also searched for recent studies (2000-2005) published in German, English, French, or Dutch using the combined search terms 'surgery' and 'volume'; included studies reported mortality or morbidity as measures of health care quality. RESULTS: 5 systematic reviews were found, which described the results of a total of 41 relevant articles. 8 original articles of sufficient quality published since 2000 were also identified. Most of these articles were also included in the reviews. Relationships between volume per hospital and per surgeon and case fatality (or survival) and morbidity were found for a number of surgical procedures. The strongest associations between volume and case fatality were found for pancreatic and oesophageal resection and, to a lesser degree, elective repair ofabdominal aortic aneurysm. For other procedures the relationship was relatively weak, absent, or not studied. CONCLUSION: Volume appears to be related to quality for some surgical procedures. The magnitude of the relationship differs depending on the procedure. For technically less complex procedures, organisation within the hospital appears to have a greater influence on the differences between hospitals than the performing surgeon.


Subject(s)
Hospital Mortality , Outcome Assessment, Health Care , Quality of Health Care , Surgical Procedures, Operative/standards , Evidence-Based Medicine , Health Care Rationing , Hospitals/statistics & numerical data , Humans , Netherlands , Quality Assurance, Health Care , Quality Indicators, Health Care , Survival Analysis
6.
Med Lav ; 97(2): 207-14, 2006.
Article in English | MEDLINE | ID: mdl-17017351

ABSTRACT

BACKGROUND AND OBJECTIVES: In many industrialised countries the number of workers with low health is expected to increase in the nursing profession. This will have implications for occupational health work in health care. The European NEXT-Study (www. next-study. net, funded by EU) investigates working conditions of nurses in ten European countries and provides the opportunity to evaluate the role of health with respect to age and the consideration of leaving nursing. METHODS: 26,263 female registered nurses from Belgium, Germany, Finland, France, England, Italy, Netherlands, Poland and Slovakia were eligible for analysis. RESULTS: In most countries, older nurses considered leaving the profession more frequently than younger nurses. 'Health' was--next to 'professional opportunities' and 'work organisational factors'--strongly associated with the consideration of leaving nursing. However, more than half of all nurses with low health wanted to remain in the profession. This group reported rather positive psychosocial working conditions--but also the highest fear for unemployment. CONCLUSIONS: The findings indicate that 'the nurse with low health' is reality in many health care settings. Both positive supporting working conditions but also lack of occupational alternatives and fear of unemployment may contribute to this. Current economic, political and demographic trends implicate that the number of active nurses with low health will increase. Occupational health surveillance will be challenged by this. But NEXT findings implicate that prevention also will have to regard work organisational factors if the aim is to sustain nurses' health and to enable nurses to remain healthy in their profession until retirement age.


Subject(s)
Health Status , Job Satisfaction , Nurses/statistics & numerical data , Occupational Health , Adolescent , Adult , Age Factors , Cohort Studies , Data Collection , Europe , Fear , Female , Humans , Life Style , Longitudinal Studies , Middle Aged , Nurses/psychology , Nurses/supply & distribution , Personnel Turnover , Retirement/psychology , Unemployment/psychology , Workload/psychology , Workload/statistics & numerical data
7.
Ned Tijdschr Geneeskd ; 148(14): 659-63, 2004 Apr 03.
Article in Dutch | MEDLINE | ID: mdl-15106316

ABSTRACT

Borrelia burgdorferi is the causative bacterial agent of Lyme borreliosis, a tick-transmitted infectious disease. The Dutch Institute for Health Care Improvement (CBO) has now issued a guideline on 'Lyme borreliosis'. Lyme borreliosis is classified as 'early', 'early disseminated', 'late' or as 'post-infectious complaints and symptoms'. Erythema migrans is the most common manifestation of early Lyme borreliosis. Frequent neurological manifestations of 'early disseminated Lyme borreliosis' include meningoradiculitis, meningitis and peripheral facial palsy, but Lyme carditis and arthritis also occur. Late Lyme borreliosis is characterised by skin abnormalities (acrodermatitis chronica atrophicans), chronic neuroborreliosis or chronic arthritis. Confirmation serology with respect to Borrelia is the most commonly used laboratory technique, but in early Lyme borreliosis the immune response may be absent. In addition, the mere presence of antibodies in the serum is no proof of an active infection with Borrelia and serology may yield false-positive reactions. Doxycycline and ceftriaxone are the most commonly used antibiotics in the various stages of Lyme borreliosis. Lyme borreliosis may be prevented by avoiding high-risk areas, keeping the skin covered as much as possible, and inspection of the skin after possible exposure to remove ticks within 24 hours. Laboratory tests after a tick bite are not recommended, nor is prophylactic treatment with antibiotics.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Antibodies, Bacterial/blood , Borrelia/immunology , Lyme Disease/diagnosis , Lyme Disease/drug therapy , Animals , Diagnosis, Differential , Erythema Chronicum Migrans/microbiology , Humans , Lyme Disease/prevention & control , Ticks/microbiology
8.
Br J Radiol ; 76(911): 835-7, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14623787

ABSTRACT

Hepatic portal venous gas has traditionally been associated with a grave prognosis and high mortality. However, with the advent of ultrasound and CT, numerous less serious causes have been associated with this dramatic radiological finding. We present a previously unreported association with colchicine toxicity. The patient ingested a large dose of colchicine and was subsequently found to have portal venous gas on CT. The source of gas was felt to be intestinal gas penetrating through the demonstrated bowel injury. No surgical intervention was deemed necessary and the finding resolved spontaneously.


Subject(s)
Colchicine/adverse effects , Embolism, Air/chemically induced , Gout Suppressants/adverse effects , Embolism, Air/diagnostic imaging , Humans , Intestines/injuries , Male , Middle Aged , Portal Vein , Tomography, X-Ray Computed
9.
Ned Tijdschr Geneeskd ; 147(15): 695-9, 2003 Apr 12.
Article in Dutch | MEDLINE | ID: mdl-12722532

ABSTRACT

The Dutch Institute for Health Care Improvement revised guideline, 'Sexually transmitted diseases and neonatal herpes' summarises the current scientific position on the diagnosis and treatment of a great number of sexually transmitted diseases (STD) and neonatal herpes. Symptomatic treatment of suspected Chlamydia trachomatis infection and gonorrhoea without previous diagnosis is not recommended. Treatment can be started immediately, once samples have been taken. Risk groups eligible for screening or proactive testing on C. trachomatis infection include: partners of C. trachomatis-positive persons, visitors of STD clinics, women who will undergo an abortion, mothers of newborns with conjunctivitis or pneumonitis, young persons of Surinam or Antillean descent, young women with new relationships and individuals whose history indicates risky sexual behaviour. A period of 3 months can be adopted between a risky contact and the HIV test (this used to be 6 months), unless post-exposure prophylaxis was used. For the treatment of early syphilis no distinction is drawn between HIV-infected and non-HIV-infected persons. It is no longer recommended that women in labour with a history of genital herpes are tested for the herpes simplex virus. Virological testing of the neonate is only advised if the mother shows signs of genital herpes during delivery.


Subject(s)
Sexually Transmitted Diseases/drug therapy , Chlamydia Infections/drug therapy , Cytomegalovirus Infections/drug therapy , Female , Gonorrhea/drug therapy , HIV Infections/drug therapy , Hepatitis B/drug therapy , Herpes Genitalis/drug therapy , Herpes Genitalis/prevention & control , Humans , Infant, Newborn , Netherlands , Papillomaviridae , Papillomavirus Infections/drug therapy , Pregnancy , Risk Factors , Sexual Behavior , Syphilis/drug therapy
10.
Clin Radiol ; 58(4): 306-10, 2003 Apr.
Article in English | MEDLINE | ID: mdl-12662952

ABSTRACT

AIM: To evaluate the halo sign for accurately distinguishing benign from malignant colonic wall thickening. MATERIALS AND METHODS: Computed tomography (CT) examinations of 92 patients (70 men; 22 women; mean age 57 years) with pathologically proven colonic wall thickening (51 benign and 41 malignant) were retrospectively reviewed in a blinded fashion. The affected segment was assessed for presence of the halo sign, degree and uniformity of thickness and density of the intramural stratum. RESULTS: The halo sign was present in 74.5% (38/51) patients with benign and 7.3% (3/41) patients with malignant bowel disease. The presence of the halo sign was 75.4% sensitive and 92.5% specific for benign bowel wall thickening. All 38 benign halos showed uniform, continuous stratification; only one of three malignant halos met the strict criteria for benign halo. CONCLUSION: The halo sign is a moderately sensitive and highly specific sign for distinguishing benign from malignant bowel wall thickening. However, it is not pathognomonic for benign disease. Detailed analysis of halo characteristics is necessary to improve the usefulness of this finding.


Subject(s)
Colonic Diseases/diagnostic imaging , Tomography, X-Ray Computed/methods , Colonic Neoplasms/diagnostic imaging , Diagnosis, Differential , Female , Humans , Male , Middle Aged , Predictive Value of Tests , Retrospective Studies , Sensitivity and Specificity
11.
Ned Tijdschr Geneeskd ; 146(29): 1359-63, 2002 Jul 20.
Article in Dutch | MEDLINE | ID: mdl-12162173

ABSTRACT

Risk factors for osteoporotic fractures that can be used for case-finding according to the recent guidelines from the Dutch Institute for Health Care Improvement (CBO) include: a vertebral fracture, a fracture past the age of 50, a positive family history, low body weight, severe immobility and the use of corticosteroids. Measurement of bone mineral density (BMD) is only recommended for case-finding and not for population screening. Measurement of the BMD is advised in women > or = 50 years of age with a fracture, women with a vertebral fracture regardless of age, women > or = 60 years of age with three of the following risk factors, and women > or = 70 years of age with two of the following risk factors: positive family history, low body weight and severe immobility. Persons with less than 1000-1200 mg calcium in their daily food who are using corticosteroids, persons with osteoporotic fractures and persons who are being treated with drugs for osteoporosis are eligible for calcium supplementation. Vitamin D supplementation is recommended for persons who do not come outdoors. For the drug treatment of osteoporosis in the first years after menopause, oestrogens, tibolone and raloxifene may be used. It is recommended that postmenopausal women with one or more osteoporotic vertebral fractures or an increased risk and a T-score below -2.5 be treated with a bisphosphonate. Patients who are expected to be treated with > or = 15 mg prednisolone equivalent per day for more than 3 months and postmenopausal women and older men (> or = 70) who will be treated with > or = 7.5 mg prednisolone equivalent per day should be started on a bisphosphonate as soon as possible. Other patients who will be treated with > or = 7.5 mg prednisolone equivalent per day should take a bisphosphonate if their Z-score is below -1 or their T-score is below -2.5.


Subject(s)
Calcium, Dietary/administration & dosage , Menopause/physiology , Osteoporosis , Practice Guidelines as Topic , Vitamin D/administration & dosage , Adrenal Cortex Hormones/adverse effects , Age Factors , Aged , Bone Density , Dietary Supplements , Female , Fractures, Bone/etiology , Humans , Male , Middle Aged , Netherlands , Osteoporosis/diagnosis , Osteoporosis/epidemiology , Osteoporosis/etiology , Osteoporosis/therapy , Prevalence , Raloxifene Hydrochloride/therapeutic use , Risk Factors , Selective Estrogen Receptor Modulators/therapeutic use , Sex Factors , Societies, Medical
12.
Am J Physiol Regul Integr Comp Physiol ; 280(4): R1123-33, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11247835

ABSTRACT

Myoglobin (Mb) buffers intracellular O2 and facilitates diffusion of O2 through the cell. These functions of Mb will be most effective when intracellular PO2 is near the partial pressure of oxygen at which Mb is half saturated (P50) of the molecule. We test the hypothesis that Mb oxygen affinity has evolved such that it is conserved when adjusted for body temperature among closely related animals. We measure oxygen P50s tonometrically and oxygen dissociation rate constants with stopped flow and generate amino acid sequence from cDNA of Mbs from fish with different body temperatures. P50s for the endothermic bluefin tuna, skipjack tuna, and blue marlin at 20 degrees C were 0.62 +/- 0.02, 0.59 +/- 0.01, 0.58 +/- 0.04 mmHg, respectively, and were significantly lower than those for ectothermic bonito (1.03 +/- 0.07 mmHg) and mackerel (1.39 +/- 0.03 mmHg). Because the oxygen affinity of Mb decreases with increasing temperature, the above differences in oxygen affinity between endothermic and ectothermic fish are reduced when adjusted for the in vivo muscle temperature of the animal. Oxygen dissociation rate constants at 20 degrees C for the endothermic species ranged from 34.1 to 49.3 s(-1), whereas those for mackerel and bonito were 102 and 62 s(-1), respectively. Correlated with the low oxygen affinity and fast dissociation kinetics of mackerel Mb is a substitution of alanine for proline that would likely result in a more flexible mackerel protein.


Subject(s)
Body Temperature/physiology , Fishes/physiology , Muscle Fibers, Slow-Twitch/physiology , Muscle, Skeletal/physiology , Myoglobin/chemistry , Myoglobin/metabolism , Amino Acid Sequence , Animals , Binding Sites , Fishes/genetics , Heme/metabolism , Molecular Sequence Data , Myoglobin/genetics , Phylogeny , Protein Structure, Secondary , Sequence Alignment , Sequence Deletion , Sequence Homology, Amino Acid , Species Specificity , Temperature , Tuna/physiology , Whales/physiology
13.
Biochemistry ; 39(46): 14330-40, 2000 Nov 21.
Article in English | MEDLINE | ID: mdl-11087382

ABSTRACT

The unicellular protozoan Paramecium caudatum contains a monomeric hemoglobin (Hb) that has only 116 amino acid residues. This Hb shares the simultaneous presence of a distal E7 glutamine and a B10 tyrosine with several invertebrate Hbs. In the study presented here, we have used ligand binding kinetics and resonance Raman spectroscopy to characterize the effect of the distal pocket residues of Paramecium Hb in stabilizing the heme-bound ligands. In the ferric state, the high-spin to low-spin (aquo-hydroxy) transition takes place with a pK(a) of approximately 9.0. The oxygen affinity (P(50) = 0.45 Torr) is similar to that of myoglobin. The oxygen on- and off-rates are also similar to those of sperm whale myoglobin. Resonance Raman data suggest hydrogen bonding stabilization of bound oxygen, evidenced by a relatively low frequency of Fe-OO stretching (563 cm(-1)). We propose that the oxy complex is an equilibrium mixture of a hydrogen-bonded closed structure and an open structure. Oxygen will dissociate preferentially from the open structure, and therefore, the fraction of open structure population controls the rate of oxygen dissociation. In the CO complex, the Fe-CO stretching frequency at 493 cm(-1) suggests an open heme pocket, which is consistent with the higher on- and off-rates for CO relative to those in myoglobin. A high rate of ligand binding is also consistent with the observation of an Fe-histidine stretching frequency at 220 cm(-1), indicating the absence of significant proximal strain. We postulate that the function of Paramecium Hb is to supply oxygen for cellular oxidative processes.


Subject(s)
Ferric Compounds/metabolism , Ferrous Compounds/metabolism , Hemoglobins/metabolism , Paramecium/chemistry , Amino Acid Sequence , Animals , Carbon Monoxide/chemistry , Carbon Monoxide/metabolism , Ferric Compounds/chemistry , Ferrous Compounds/chemistry , Hemoglobins/chemistry , Humans , Kinetics , Ligands , Methemoglobin/chemistry , Methemoglobin/metabolism , Molecular Sequence Data , Oxygen/chemistry , Oxygen/metabolism , Oxyhemoglobins/chemistry , Oxyhemoglobins/metabolism , Protein Binding , Spectrum Analysis, Raman
14.
Eur J Biochem ; 267(15): 4770-80, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10903511

ABSTRACT

A putative hemoglobin (Hb) gene, related to those previously characterized in the green alga Chlamydomonas eugametos, the ciliated protozoan Paramecium caudatum, the cyanobacterium Nostoc commune and the bacterium Mycobacterium tuberculosis, was recently discovered in the complete genome sequence of the cyanobacterium Synechocystis PCC 6803. In this paper, we report the purification of Synechocystis Hb and describe some of its salient biochemical and spectroscopic properties. We show that the recombinant protein contains Fe-protoporphyrin IX and forms a very stable complex with oxygen. The oxygen dissociation rate measured, 0.011 s(-1), is among the smallest known and is four orders of magnitude smaller than the rate measured for N. commune Hb, which suggests functional differences between these Hbs. Optical and resonance Raman spectroscopic study of the structure of the heme pocket of Synechocystis Hb reveals that the heme is 6-coordinate and low-spin in both ferric and ferrous forms in the pH range 5.5-10.5. We present evidence that His46, predicted to occupy the helical position E10 based on amino-acid sequence comparison, is involved in the formation of the ferric and ferrous 6-coordinate low-spin structures. The analysis of the His46Ala mutant shows that the ferrous form is 5-coordinate and high-spin and the ferric form contains a 6-coordinate high-spin component in which the sixth ligand is most probably a water molecule. We conclude that the heme pocket of the wild type Synechocystis Hb has a unique structure that requires a histidine residue at the E10 position for the formation of its native structure.


Subject(s)
Cyanobacteria/chemistry , Heme/chemistry , Hemoglobins/chemistry , Amino Acid Sequence , Cloning, Molecular , Hemoglobins/genetics , Hemoglobins/isolation & purification , Histidine/chemistry , Iron/metabolism , Ligands , Molecular Sequence Data , Mutagenesis, Site-Directed , Nitrogen/metabolism , Oxygen/metabolism , Plasmids/metabolism , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Spectrophotometry , Spectrum Analysis, Raman
15.
AJR Am J Roentgenol ; 172(4): 893-6, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10587117

ABSTRACT

OBJECTIVE: Radiologists can now use the Internet as a dissemination medium for radiologic teaching files. This has greatly increased the availability of radiologic information to a larger number of people. However, the creation of the teaching files themselves remains a static and labor-intensive process. As a partial solution to this problem, we set out to create a World Wide Web-based Internet engine for the collaborative entry and peer review of radiologic teaching files. CONCLUSION: We created a system that facilitates, simplifies, and improves the generation of radiologic teaching files. We used the Internet to help promote the creation of teaching files in a more timely, efficient, and effective manner.


Subject(s)
Audiovisual Aids , Internet , Peer Review , Radiology/education
16.
Biochemistry ; 38(46): 15360-8, 1999 Nov 16.
Article in English | MEDLINE | ID: mdl-10563822

ABSTRACT

We have studied the unusual heme ligand structure of the ferric forms of a recombinant Chlamydomonas chloroplast hemoglobin and its several single-amino acid mutants by EPR, optical absorbance, and resonance Raman spectroscopy. The helical positions of glutamine-84, tyrosine-63, and lysine-87 are suggested to correspond to E7, B10, and E10, respectively, in the distal heme pocket on the basis of amino acid sequence comparison of mammalian globins. The protein undergoes a transition with a pK of 6.3 from a six-coordinate high-spin aquomet form at acidic pH to a six-coordinate low-spin form. The EPR signal of the low-spin form for the wild-type protein is absent for the Tyr63Leu mutant, suggesting that the B10 tyrosine in the wild-type protein ligates to the heme as tyrosinate. For the Tyr63Leu mutant, a new low-spin signal resembling that of alkaline cytochrome c (a His-heme-Lys species) is resolved, suggesting that the E10 lysine now coordinates to the heme. In the wild-type protein, the oxygen of the tyrosine-63 side chain is likely to share a proton with the side chain of lysine-87, suggested by the observation of a H/D sensitive resonance Raman line at 502 cm(-)(1) that is tentatively assigned as a vibrational mode of the Fe-O bond between the iron and the tyrosinate. We propose that the transition from the high-spin to the low-spin form of the protein occurs by deprotonation and ligation to the heme of the B10 tyrosine oxygen, facilitated by strong interaction with the E10 lysine side chain.


Subject(s)
Chlamydomonas/metabolism , Chloroplasts/metabolism , Heme/metabolism , Hemoglobins/metabolism , Tyrosine/metabolism , Amino Acid Substitution/genetics , Animals , Chlamydomonas/chemistry , Chlamydomonas/genetics , Chloroplasts/chemistry , Chloroplasts/genetics , Electron Spin Resonance Spectroscopy , Ferric Compounds/chemistry , Ferric Compounds/metabolism , Heme/chemistry , Heme/genetics , Hemoglobins/chemistry , Hemoglobins/genetics , Hydrogen-Ion Concentration , Ligands , Mutagenesis, Site-Directed , Spectrum Analysis, Raman , Tyrosine/genetics
17.
Epidemiology ; 10(6): 761-3, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10535792

ABSTRACT

We evaluated reproductive risk factors for mucinous and non-mucinous tumors in a population-based case-control study of epithelial ovarian cancer among women ages 20-79 years. We observed a reduction in risk of tumors of both types in association with one or more full-term pregnancies and with use of oral contraceptives for 5 or more years. While findings of some previous studies support the hypothesis that certain aspects of a woman's reproductive life have a different impact on the risk of these subtypes of ovarian epithelial cancer, our data suggest that this issue is not yet resolved.


Subject(s)
Neoplasms, Glandular and Epithelial/epidemiology , Ovarian Neoplasms/epidemiology , Adult , Aged , Case-Control Studies , Female , Humans , Hysterectomy , Middle Aged , Parity , Risk Factors , Sterilization, Tubal , Washington/epidemiology
18.
Proc Natl Acad Sci U S A ; 96(20): 11223-8, 1999 Sep 28.
Article in English | MEDLINE | ID: mdl-10500158

ABSTRACT

Two putative hemoglobin genes, glbN and glbO, were recently discovered in the complete genome sequence of Mycobacterium tuberculosis H37Rv. Here, we show that the glbN gene encodes a dimeric hemoglobin (HbN) that binds oxygen cooperatively with very high affinity (P(50) = 0.013 mmHg at 20 degrees C) because of a fast combination (25 microM(-1).s(-1)) and a slow dissociation (0.2 s(-1)) rate. Resonance Raman spectroscopy and ligand association/dissociation kinetic measurements, along with mutagenesis studies, reveal that the stabilization of the bound oxygen is achieved through a tyrosine at the B10 position in the distal pocket of the heme with a conformation that is unique among the globins. Physiological studies performed with Mycobacterium bovis bacillus Calmette-Guérin demonstrate that the expression of HbN is greatly enhanced during the stationary phase in aerobic cultures but not under conditions of limited oxygen availability. The results suggest that, physiologically, the primary role of HbN may be to protect the bacilli against reactive nitrogen species produced by the host macrophage.


Subject(s)
Bacterial Proteins , Hemoglobins/chemistry , Mycobacterium tuberculosis/metabolism , Oxygen/metabolism , Amino Acid Sequence , Hemoglobins/physiology , Kinetics , Molecular Sequence Data , Phylogeny , Recombinant Proteins/chemistry , Spectrum Analysis, Raman , Truncated Hemoglobins
19.
Biophys J ; 77(2): 1093-9, 1999 Aug.
Article in English | MEDLINE | ID: mdl-10423453

ABSTRACT

The x-ray crystal structures of the cyanide derivative of Lucina pectinata monomeric hemoglobin I (L. pectinata HbI) and sperm whale (Physeter catodon) myoglobin (Mb), generally taken as reference models for monomeric hemoproteins carrying hydrogen sulfide and oxygen, respectively, have been determined at 1.9 A (R-factor = 0. 184), and 1.8 A (R-factor = 0.181) resolution, respectively, at room temperature (lambda = 1.542 A). Moreover, the x-ray crystal structure of the L. pectinata HbI:cyanide derivative has been studied at 1.4-A resolution (R-factor = 0.118) and 100 K (on a synchrotron source lambda = 0.998 A). At room temperature, the cyanide ligand is roughly parallel to the heme plane of L. pectinata HbI, being located approximately 2.5 A from the iron atom. On the other hand, the crystal structure of the L. pectinata HbI:cyanide derivative at 100 K shows that the diatomic ligand is coordinated to the iron atom in an orientation almost perpendicular to the heme (the Fe-C distance being 1.95 A), adopting a coordination geometry strictly reminescent of that observed in sperm whale Mb, at room temperature. The unusual cyanide distal site orientation observed in L. pectinata HbI, at room temperature, may reflect reduction of the heme Fe(III) atom induced by free radical species during x-ray data collection using Cu Kalpha radiation.


Subject(s)
Cyanides/metabolism , Hemoglobins, Abnormal/chemistry , Hemoglobins, Abnormal/metabolism , Hemoglobins , Myoglobin/chemistry , Myoglobin/metabolism , Animals , Binding Sites , Biophysical Phenomena , Biophysics , Bivalvia , Crystallography, X-Ray , Cyanides/chemistry , Free Radicals/chemistry , Heme/chemistry , In Vitro Techniques , Models, Molecular , Protein Binding , Protein Conformation , Whales
20.
J Biol Chem ; 274(11): 6898-910, 1999 Mar 12.
Article in English | MEDLINE | ID: mdl-10066743

ABSTRACT

We report the optical and resonance Raman spectral characterization of ferrous recombinant Chlamydomonas LI637 hemoglobin. We show that it is present in three pH-dependent equilibrium forms including a 4-coordinate species at acid pH, a 5-coordinate high spin species at neutral pH, and a 6-coordinate low spin species at alkaline pH. The proximal ligand to the heme is the imidazole group of a histidine. Kinetics of the reactions with ligands were determined by stopped-flow spectroscopy. At alkaline pH, combination with oxygen, nitric oxide, and carbon monoxide displays a kinetic behavior that is interpreted as being rate-limited by conversion of the 6-coordinate form to a reactive 5-coordinate form. At neutral pH, combination rates of the 5-coordinate form with oxygen and carbon monoxide were much faster (>10(7) microM-1 s-1). The dissociation rate constant measured for oxygen is among the slowest known, 0.014 s-1, and is independent of pH. Replacement of the tyrosine 63 (B10) by leucine or of the putative distal glutamine by glycine increases the dissociation rate constant 70- and 30-fold and increases the rate of autoxidation 20- and 90-fold, respectively. These results are consistent with at least two hydrogen bonds stabilizing the bound oxygen molecule, one from tyrosine B10 and the other from the distal glutamine. In addition, the high frequency (232 cm-1) of the iron-histidine bond suggests a structure that lacks any proximal strain thus contributing to high ligand affinity.


Subject(s)
Chlamydomonas/chemistry , Heme/chemistry , Hemoglobins/chemistry , Amino Acid Sequence , Animals , Base Sequence , Carbon Monoxide/metabolism , DNA Primers , Electron Spin Resonance Spectroscopy , Heme/metabolism , Hemoglobins/metabolism , Hydrogen-Ion Concentration , Kinetics , Molecular Sequence Data , Nitric Oxide/metabolism , Oxidation-Reduction , Oxygen/metabolism , Protein Binding , Protein Conformation , Sequence Homology, Amino Acid , Spectrum Analysis, Raman
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