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1.
Cell ; 78(3): 461-71, 1994 Aug 12.
Article in English | MEDLINE | ID: mdl-8062388

ABSTRACT

The environment of secretory proteins undergoing translocation across the ER membrane was determined by incorporating fluorescent probes into nascent chains during translation. Dyes were positioned at various locations across the entire bilayer and inside the ribosome, and in each case the probes were in an aqueous milieu, as shown both by their fluorescence lifetimes and by collisional quenching of their fluorescence by iodide ions introduced into the ER lumen. The nascent chain therefore occupies an aqueous pore that spans the entire membrane. Since the pore is sealed off from the cytoplasm, cotranslational translocation is effected topographically. This pore is not open to the lumen after targeting is completed; it opens only after the nascent chain length reaches about 70 residues.


Subject(s)
Endoplasmic Reticulum/metabolism , Ion Channel Gating , Proteins/metabolism , Animals , Biological Transport , Cell Compartmentation , Cytoplasm/metabolism , Fluorescent Dyes , Iodides/metabolism , Motion , Oxadiazoles/metabolism , Peptide Chain Elongation, Translational , Ribosomes/metabolism , Signal Recognition Particle/metabolism , Water/metabolism
2.
J Bacteriol ; 172(6): 3328-34, 1990 Jun.
Article in English | MEDLINE | ID: mdl-2345148

ABSTRACT

The enzymes involved in the purine interconversion pathway of wild-type and purine analog-resistant strains of Methanobacterium thermoautotrophicum Marburg were assayed by radiometric and spectrophotometric methods. Wild-type cells incorporated labeled adenine, guanine, and hypoxanthine, whereas mutant strains varied in their ability to incorporate these bases. Adenine, guanine, hypoxanthine, and xanthine were activated by phosphoribosyltransferase activities present in wild-type cell extracts. Some mutant strains simultaneously lost the ability to convert both guanine and hypoxanthine to the respective nucleotide, suggesting that the same enzyme activates both bases. Adenosine, guanosine, and inosine phosphorylase activities were detected for the conversion of base to nucleoside. Adenine deaminase activity was detected at low levels. Guanine deaminase activity was not detected. Nucleoside kinase activities for the conversion of adenosine, guanosine, and inosine to the respective nucleotides were detected by a new assay. The nucleotide-interconverting enzymes AMP deaminase, succinyl-AMP synthetase, succinyl-AMP lyase, IMP dehydrogenase, and GMP synthetase were present in extracts; GMP reductase was not detected. The results indicate that this autotrophic methanogen has a complex system for the utilization of exogenous purines.


Subject(s)
Euryarchaeota/metabolism , Purines/metabolism , Euryarchaeota/drug effects , Euryarchaeota/genetics , Hypoxanthine Phosphoribosyltransferase/analysis , Mutation , Pentosyltransferases/analysis , Purines/pharmacology
3.
J Bacteriol ; 170(9): 4420-3, 1988 Sep.
Article in English | MEDLINE | ID: mdl-3137217

ABSTRACT

Cell extracts of methanogens and the thermoacidophile Sulfolobus solfataricus contained little or no folic acid (pteroylglutamate) or pteroylpolyglutamate activity (less than 0.1 nmol/g [dry weight]). However, the halophile Halobacterium salinarum contained pteroylmono- or pteroyldiglutamates, and Halobacterium volcanii and Halobacterium halobium contained pteroyltriglutamates at levels equivalent to those in eubacteria (greater than 1 nmol/g [dry weight]).


Subject(s)
Archaea/analysis , Bacteria/analysis , Euryarchaeota/analysis , Folic Acid/analogs & derivatives , Folic Acid/analysis , Halobacterium/analysis , Pteroylpolyglutamic Acids/analysis , Biological Assay
4.
J Bacteriol ; 170(2): 653-6, 1988 Feb.
Article in English | MEDLINE | ID: mdl-3422229

ABSTRACT

A wild-type strain of Methanobacterium thermoautotrophicum Marburg was transformed by DNA from strains resistant to 5-fluorouracil. Recipient cells were grown without selection on gellan gum (GELRITE) plates with DNA. Drug-resistant cells were recovered by replica plating the resulting colonies onto drug plates. Transformation required high-molecular-weight DNA with appropriate markers and was not observed on agar or in liquid media under a variety of conditions.


Subject(s)
Euryarchaeota/genetics , Transformation, Bacterial , Culture Media , DNA, Bacterial/genetics , Drug Resistance, Microbial/genetics , Euryarchaeota/drug effects , Fluorouracil/pharmacology , Genetic Markers , Mutation , Phenotype
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