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1.
J STEM Outreach ; 1(2): 48-60, 2018 Apr.
Article in English | MEDLINE | ID: mdl-31667467

ABSTRACT

Teaching the Genome Generation (TtGG) is a teacher professional development program and set of high school biology lessons that support interwoven classroom instruction of molecular genetics, bioinformatics, and bioethics. Participating teachers from across New England implement the modular elements of program at a high rate in a variety of biology classrooms. Evaluation data collected over three academic years (2014/15 to 2016/17) indicate that TtGG has increased teachers' abilities to integrate complex concepts of genomics and bioethics into their high school classes.

2.
Am J Physiol Regul Integr Comp Physiol ; 293(3): R1400-9, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17567710

ABSTRACT

The nuclear receptor FXRalpha (NR1H4) plays a pivotal role in maintaining bile salt and lipid homeostasis by functioning as a bile salt sensor in mammals. In contrast, FXRbeta (NR1H5) from mouse is activated by lanosterol and does not share common ligands with FXRalpha. To further elucidate FXR ligand/receptor and structure/function relationships, we characterized a FXR gene from the marine skate, Leucoraja erinacea, representing a vertebrate lineage that diverged over 400 million years ago. Phylogenetic analysis of sequence data indicated that skate Fxr (sFxr) is a FXRbeta. There is an extra sequence in the middle of the sFxr ligand binding domain (LBD) compared with the LBD of FXRalpha. Luciferase reporter assays demonstrated that sFxr responds weakly to scymnol sulfate, bile salts, and synthetic FXRalpha ligands, in striking difference from human FXRalpha (hFXRalpha). Interestingly, all-trans retinoic acid was capable of transactivating both hFXRalpha and sFxr. When the extra amino acids in the sFxr LBD were deleted and replaced with the corresponding sequence from hFXRalpha, the mutant sFxr gained responsiveness to ursodeoxycholic acid, GW4064, and fexaramine. Surprisingly, chenodeoxycholic acid antagonized this activation. Together, these results indicate that FXR is an ancient nuclear receptor and suggest that FXRalpha may have acquired ligand specificity for bile acids later in evolution by deletion of a sequence from its LBD. Acquisition of this property may be an example of molecular exploitation, where an older molecule is recruited for a new functional role.


Subject(s)
Bile Acids and Salts/pharmacology , Biological Evolution , DNA-Binding Proteins/physiology , Receptors, Cytoplasmic and Nuclear/physiology , Transcription Factors/physiology , Animals , Cloning, Molecular , DNA/genetics , DNA-Binding Proteins/drug effects , Electrophoretic Mobility Shift Assay , Genes, Reporter/genetics , Glutathione Transferase/metabolism , Humans , Lanosterol/pharmacology , Ligands , Luciferases/genetics , Models, Molecular , Phylogeny , Plasmids/genetics , Receptors, Cytoplasmic and Nuclear/drug effects , Reverse Transcriptase Polymerase Chain Reaction , Skates, Fish/physiology , Substrate Specificity , Tissue Distribution , Transcription Factors/drug effects , Tretinoin/pharmacology
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