Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 9 de 9
Filter
2.
J Proteome Res ; 16(7): 2495-2507, 2017 07 07.
Article in English | MEDLINE | ID: mdl-28569067

ABSTRACT

The wild silkworm Bombyx mandarina was domesticated to produce silk in China approximately 5000 years ago. Silk production is greatly improved in the domesticated silkworm B. mori, but the molecular basis of the functional evolution of silk gland remains elusive. We performed shotgun proteomics with label-free quantification analysis and identified 1012 and 822 proteins from the posterior silk glands (PSGs) of wild silkworms on the third and fifth days of the fifth instar, respectively, with 128 of these differentially expressed. Bioinformatics analysis revealed that, with the development of the PSG, the up-regulated proteins were mainly involved in the ribosome pathway, similar to what we previously reported for B. mori. Additionally, we screened 50 proteins with differential expression between wild and domesticated silkworms that might be involved in domestication at the two stages. Interestingly, the up-regulated proteins in domesticated compared to wild silkworms were enriched in the ribosome pathway, which is closely related to cell size and translation capacity. Together, these results suggest that functional evolution of the PSG during domestication was driven by reinforcing the advantageous pathways to increase the synthesis efficiency of silk proteins in each cell and thereby improve silk yield.


Subject(s)
Bombyx/genetics , Chromosomes, Insect/chemistry , Exocrine Glands/physiology , Insect Proteins/isolation & purification , Proteome/isolation & purification , Animals , Animals, Wild , Bombyx/growth & development , Bombyx/metabolism , Chromosome Mapping , Domestication , Exocrine Glands/metabolism , Gene Expression Regulation, Developmental , Gene Ontology , Insect Proteins/biosynthesis , Insect Proteins/classification , Insect Proteins/genetics , Molecular Sequence Annotation , Proteome/biosynthesis , Proteome/classification , Proteome/genetics , Silk/biosynthesis
3.
Methods Inf Med ; 55(5): 450-454, 2016 Oct 17.
Article in English | MEDLINE | ID: mdl-27626460

ABSTRACT

OBJECTIVES: To find discriminative combination of influential factors of Intracerebral hematoma (ICH) to cluster ICH patients with similar features to explore relationship among influential factors and 30-day mortality of ICH. METHODS: The data of ICH patients are collected. We use a decision tree to find discriminative combination of the influential factors. We cluster ICH patients with similar features using Fuzzy C-means algorithm (FCM) to construct a support vector machine (SVM) for each cluster to build a multi-SVM classifier. Finally, we designate each testing data into its appropriate cluster and apply the corresponding SVM classifier of the cluster to explore the relationship among impact factors and 30-day mortality. RESULTS: The two influential factors chosen to split the decision tree are Glasgow coma scale (GCS) score and Hematoma size. FCM algorithm finds three centroids, one for high danger group, one for middle danger group, and the other for low danger group. The proposed approach outperforms benchmark experiments without FCM algorithm to cluster training data. CONCLUSIONS: It is appropriate to construct a classifier for each cluster with similar features. The combination of factors with significant discrimination as input variables should outperform that with only single discriminative factor as input variable.


Subject(s)
Algorithms , Cerebral Hemorrhage/diagnosis , Hematoma/diagnosis , Decision Trees , Fuzzy Logic , Humans , Models, Theoretical
4.
J Microbiol Immunol Infect ; 48(4): 450-2, 2015 Aug.
Article in English | MEDLINE | ID: mdl-23357607

ABSTRACT

Haemophilus parainfluenzae is a common inhabitant of the human upper respiratory tract of the normal oral microflora. We report three men who had been having unprotected sex with men (MSM) and subsequently acquired H. parainfluenzae urethritis, which was confirmed by 16S rRNA gene sequencing analysis. Two men were treated with ceftriaxone and doxycycline, and the third man was treated with clarithromycin. All three patients responded to treatment. This case series highlights the potential role of H. parainfluenzae as a sexually transmitted genitourinary pathogen.


Subject(s)
Haemophilus Infections/diagnosis , Haemophilus Infections/pathology , Haemophilus parainfluenzae/isolation & purification , Urethritis/diagnosis , Urethritis/pathology , Adult , Anti-Bacterial Agents/therapeutic use , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Haemophilus Infections/drug therapy , Haemophilus Infections/microbiology , Homosexuality, Male , Humans , Male , Molecular Sequence Data , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Treatment Outcome , Urethritis/drug therapy , Urethritis/microbiology
5.
Int J Antimicrob Agents ; 35(5): 457-60, 2010 May.
Article in English | MEDLINE | ID: mdl-20188518

ABSTRACT

Although the use of GC agar for determining Neisseria gonorrhoeae antimicrobial susceptibilities is suggested by Clinical and Laboratory Standard Institute (CLSI) guidelines, chocolate agar is still used in some regions owing to its low cost and availability. To determine the differences in susceptibilities determined using GC and chocolate agars, 163 non-duplicate N. gonorrhoeae isolates were tested. Minimum inhibitory concentrations (MICs) and percent susceptibilities determined using the GC agar dilution method, respectively, were as follows: ceftriaxone, 0.004-0.125 mg/L, 100%; cefixime, 0.002 mg/L to >32 mg/L, 98.2%; and ciprofloxacin, 0.002 mg/L to >32 mg/L, 3.1%. Comparison of ceftriaxone MICs determined by the Etest using GC agar and chocolate agar showed that use of GC agar tended to result in lower MICs than GC agar dilution, whilst use of chocolate agar tended to result in higher MICs (concordance, 55.8% and 82.8%, respectively). Disk inhibition zones obtained using GC agar and chocolate agar (and their correlation coefficients) were, respectively: ceftriaxone, 35-55 mm and 25-50mm (0.46); ciprofloxacin, 6-55 mm and 6-43 mm (0.84); and penicillin, 6-47 mm and 6-50 mm (0.93). Use of chocolate agar with the disk diffusion method for ceftriaxone was associated with a 5.5% false resistance rate. In summary, compared with GC agar, susceptibility testing using chocolate agar tends to yield higher MICs with the Etest and smaller disk inhibition zones with disk diffusion methods. Clinical microbiology laboratories should strictly adhere to CLSI recommendations by using GC agar instead of chocolate agar when performing susceptibility testing for N. gonorrhoeae.


Subject(s)
Culture Media/chemistry , Gonorrhea/microbiology , Neisseria gonorrhoeae/drug effects , Adolescent , Adult , Aged , Aged, 80 and over , Female , Humans , Male , Microbial Sensitivity Tests/methods , Middle Aged , Neisseria gonorrhoeae/isolation & purification , Young Adult
6.
Diabetes Care ; 32(12): 2294-6, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19755627

ABSTRACT

OBJECTIVE: To validate the performance of current diabetes risk scores (DRSs) based on simple clinical information in detecting type 2 diabetes, metabolic syndrome (MetSyn), and chronic kidney disease (CKD). RESEARCH DESIGN AND METHODS: The performance of 10 DRSs was evaluated in a cross-sectional population screening of 2,759 Taiwanese subjects. RESULTS: All DRSs significantly correlated with measures of insulin resistance, estimated glomerular filtration rate, and urine albumin excretion. The prevalence of screening-detected diabetes (SDM), MetSyn, and CKD increased with higher DRSs. For prediction of SDM, the Cambridge DRS by Griffin et al. and the Finnish DRS outperformed other DRSs in terms of discriminative power and model fit. For prediction of MetSyn and CKD, the Atherosclerosis Risk in Community Study score by Schmidt et al. outperformed other DRSs. CONCLUSIONS: Risk scores based on simple clinical information are useful to identify individuals at high risk for diabetes, MetSyn, and CKD in different ethnic populations.


Subject(s)
Diabetes Mellitus/epidemiology , Kidney Diseases/epidemiology , Metabolic Syndrome/epidemiology , Chronic Disease , Cross-Sectional Studies , Ethnicity/statistics & numerical data , Humans , Predictive Value of Tests , ROC Curve , Racial Groups/statistics & numerical data , Risk Factors , Taiwan/epidemiology
7.
Clin Chim Acta ; 404(2): 149-53, 2009 Jun 27.
Article in English | MEDLINE | ID: mdl-19336232

ABSTRACT

BACKGROUND: The relationship between serum vascular adhesion protein-1 (VAP-1) and plasma glucose in normal and drug-naïve type 2 diabetes subjects is unclear. We examined if serum VAP-1 changed acutely to oral glucose loading and analyzed the relationship between serum VAP-1, fasting plasma glucose (FPG), hemoglobin A1c, and type 2 diabetes. METHODS: Adults without history of diabetes were included. Subjects taking anti-diabetic drugs were excluded. Serum VAP-1 was analyzed by time-resolved immunofluorometric assay. RESULTS: We recruited 333 subjects (186 females and 147 males), aged 56.1 +/- 11.6 y. After glucose challenge, serum VAP-1 rose significantly at 30 min (p < 0.0001) and lasted until 2 h (p < 0.0001). The change of serum VAP-1 between fasting and 30-min postload correlated inversely to the change of plasma insulin (r = -0.21, p = 0.049). Fasting serum VAP-1 was associated with FPG in those with FPG > or = 5.55 mmol/l (p = 0.025) but not in those with FPG < 5.55 mmol/l (p = NS). Fasting serum VAP-1 were higher in diabetic subjects (p = 0.04) and correlated positively to hemoglobin A1c (r = 0.18, p = 0.002) after adjusting for age, gender, and waist circumference. CONCLUSIONS: Serum VAP-1 is increased in both acute and chronic hyperglycemia. Whether serum VAP-1 is a good biomarker for hyperglycemia-associated complications merits further investigation.


Subject(s)
Amine Oxidase (Copper-Containing)/blood , Cell Adhesion Molecules/blood , Diabetes Mellitus, Type 2/complications , Hyperglycemia/blood , Acute Disease , Aged , Biomarkers/blood , Blood Glucose/analysis , Chronic Disease , Fasting/blood , Female , Glucose/administration & dosage , Glycated Hemoglobin/analysis , Humans , Hyperglycemia/etiology , Male , Middle Aged
8.
Clin Chim Acta ; 403(1-2): 97-101, 2009 May.
Article in English | MEDLINE | ID: mdl-19361461

ABSTRACT

BACKGROUND: We investigated if serum vascular adhesion protein-1 (SSAO/VAP-1) changed acutely following oral glucose loading and whether such changes are correlated with surrogate markers of atherosclerosis. METHODS: A total of 115 non-diabetics subjects were enrolled for an oral glucose tolerance test (OGTT). Carotid intima-medial thickness (IMT) was measured by ultrasonography. Serum SSAO/VAP-1 was analyzed by time-resolved immunofluorometric assay. Serum thiobarbituric acid reactive substances (TBARS) and advanced glycated end products (AGEs) were measured by fluorometric assays. RESULTS: Serum SSAO/VAP-1 increased significantly at 30 min after oral glucose loading and lasted to 2 h (p=0.0005 and p<0.0001, for 30 min and 2 h respectively). The area under curve of serum SSAO/VAP-1 during OGTT (AUC-VAP-1) correlated significantly with carotid IMT, independent of age, gender, low-density lipoprotein cholesterol, systolic blood pressure, hemoglobin A1c, serum TBARS, AGEs, and high-sensitivity C-reactive protein. Subjects with a positive AUC-VAP-1 had significantly higher serum TBARS and AGEs than subjects with a negative AUC-VAP-1 adjusted for age and gender. CONCLUSIONS: Serum SSAO/VAP-1 changed acutely following oral glucose loading in non-diabetic subjects. Change of serum SSAO/VAP-1 correlated independently to serum TBARS, AGEs, and carotid IMT. Our findings suggest that acute change of serum SSAO/VAP-1 is a novel marker for hyperglycemia-induced atherosclerosis.


Subject(s)
Amine Oxidase (Copper-Containing)/blood , Carotid Arteries/pathology , Cell Adhesion Molecules/blood , Glucose/pharmacology , Tunica Intima/pathology , Amine Oxidase (Copper-Containing)/metabolism , Atherosclerosis/blood , Atherosclerosis/pathology , Cell Adhesion Molecules/metabolism , Diabetes Mellitus , Fasting , Female , Glycation End Products, Advanced , Humans , Male , Middle Aged
9.
Yi Chuan ; 24(5): 519-22, 2002 Sep.
Article in Chinese | MEDLINE | ID: mdl-16135440

ABSTRACT

To elucidate abnormalities of LPL gene in hyperlipidemia in the Chinese population in Guangdong,genomic DNA was extracted from leukocyte of 258 patients with primary hyperlipidemia.A segment of LPL gene including exon 4 and its flanking sequences was analyzed by PCR-SSCP. The PCR products with abnormal SSCP pattern were cloned and sequenced. As a C-->T transition mutation at-6 bp of intron 3 was found in two Chinese with hyperlipidemia and the mutation was not found in 252 normolipidemic controls,the C-->T transition in intron 3 may be related to hyperlipedemia.

SELECTION OF CITATIONS
SEARCH DETAIL
...