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1.
Front Plant Sci ; 13: 823865, 2022.
Article in English | MEDLINE | ID: mdl-35360340

ABSTRACT

Different soybean varieties vary greatly in their nutritional value and composition. Screening for superior varieties is also essential for the development of the soybean seed industry. The objective of the paper was to analyze the feasibility of terahertz (THz) frequency-domain spectroscopy and chemometrics for soybean variety identification. Meanwhile, a grey wolf optimizer-support vector machine (GWO-SVM) soybean variety identification model was proposed. Firstly, the THz frequency-domain spectra of experimental samples (6 varieties, 270 in total) were collected. Principal component analysis (PCA) was used to analyze the THz spectra. After that, 203 samples from the calibration set were used to establish a soybean variety identification model. Finally, 67 samples from the test set were used for prediction validation. The experimental results demonstrated that THz frequency-domain spectroscopy combined with GWO-SVM could quickly and accurately identify soybean varieties. Compared with discriminant partial least squares (DPLS) and particles swarm optimization support vector machine, GWO-SVM combined with the second derivative could establish a better soybean variety identification model. The overall correct identification rate of its prediction set was 97.01%.

2.
Spectrochim Acta A Mol Biomol Spectrosc ; 253: 119571, 2021 May 15.
Article in English | MEDLINE | ID: mdl-33621931

ABSTRACT

Protein content in soybean is a key determinant of its nutritional and economic value. The paper investigated the feasibility of terahertz (THz) spectroscopy and dimensionality reduction algorithms for the determination of protein content in soybean. First of all, the THz sample spectrum was data processed by pre-processing or dimensionality reduction algorithms. Secondly, by calibration set, using partial least squares regression (PLSR), genetic algorithms-support vector regression (GA-SVR), grey wolf optimizer-support vector regression (GWO-SVR) and back propagation neural network (BPNN) were respectively used to model protein content determination. Afterwards, the model was validated by the prediction set. Ultimately, the BPNN model combined with linear discriminant analysis (LDA) for related coefficient of prediction set (Rp), root mean square error of prediction set (RMSEP), relative standard deviation (RSD), the time required for the operation was respectively 0.9677, 1.2467%, 3.3664%, and 53.51 s. The experimental results showed that the rapid and accurate quantitative determination of protein in soybean using THz spectroscopy is feasible after a suitable dimensionality reduction algorithm.


Subject(s)
Terahertz Spectroscopy , Algorithms , Least-Squares Analysis , Glycine max , Support Vector Machine
3.
Spectrochim Acta A Mol Biomol Spectrosc ; 238: 118453, 2020 Sep 05.
Article in English | MEDLINE | ID: mdl-32408224

ABSTRACT

Genetically modified soybeans are the world's most important genetically modified agricultural product. At present, the traditional methods for identifying genetically modified and non-transgenic soybeans are time-consuming, costly, and complicated to operate, which cannot meet the needs of practical applications. Therefore, it is necessary to discover a fast and accurate method for identifying transgenic soybeans. Terahertz (THz) time domain spectra were collected in sequence from 225 transgenic and non-transgenic soybean samples. Fourier transform was used to convert the terahertz time domain spectrum into a THz frequency domain spectrum with a frequency range of 0.1-2.5 THz. Firstly, the interval partial least squares (iPLS) method was used to remove interference spectral bands and select appropriate spectral intervals. Secondly, 168 samples were selected as the calibration set. Discriminant partial least squares (DPLS), Grid Search support vector machine (Grid Search-SVM) and principal component analysis back propagation neural network (PCA-BPNN) were used to establish a qualitative identification model. Afterwards, 57 test set samples were predicted. By comparing the experimental results, it was found that iPLS could effectively screen and remove the interference THz band, which was more helpful to improve the efficiency and accuracy of the identification model. After the iPLS and mean center pre-treatment technology, the Grid Search-SVM identification model had the best identification effect, with a total accuracy rate of 98.25% (transgenic identification rate was 96.15%, non-transgenic identification rate was 100%). This study shows that after selecting spectra from iPLS, THz spectroscopy combined with chemometrics can more accurately, quickly, and efficiently identify transgenic and non-transgenic soybeans.


Subject(s)
Glycine max/chemistry , Plants, Genetically Modified/chemistry , Terahertz Spectroscopy/methods , Discriminant Analysis , Least-Squares Analysis , Neural Networks, Computer , Principal Component Analysis , Support Vector Machine
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