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1.
BMC Plant Biol ; 24(1): 392, 2024 May 13.
Article in English | MEDLINE | ID: mdl-38735932

ABSTRACT

BACKGROUND: Long-chain acyl-coenzyme A synthetase (LACS) is a type of acylating enzyme with AMP-binding, playing an important role in the growth, development, and stress response processes of plants. RESULTS: The research team identified different numbers of LACS in four cotton species (Gossypium hirsutum, Gossypium barbadense, Gossypium raimondii, and Gossypium arboreum). By analyzing the structure and evolutionary characteristics of the LACS, the GhLACS were divided into six subgroups, and a chromosome distribution map of the family members was drawn, providing a basis for further research classification and positioning. Promoter cis-acting element analysis showed that most GhLACS contain plant hormones (GA, MeJA) or non-biological stress-related cis-elements. The expression patterns of GhLACS under salt stress treatment were analyzed, and the results showed that GhLACS may significantly participate in salt stress response through different mechanisms. The research team selected 12 GhLACSs responsive to salt stress for tissue expression analysis and found that these genes are expressed in different tissues. CONCLUSIONS: There is a certain diversity of LACS among different cotton species. Analysis of promoter cis-acting elements suggests that GhLACS may be involved in regulating plant growth, development and stress response processes. GhLACS25 was selected for in-depth study, which confirmed its significant role in salt stress response through virus-induced gene silencing (VIGS) and induced expression in yeast cells.


Subject(s)
Gossypium , Plant Proteins , Salt Stress , Gossypium/genetics , Gossypium/physiology , Salt Stress/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Gene Expression Regulation, Plant , Coenzyme A Ligases/genetics , Coenzyme A Ligases/metabolism , Multigene Family , Phylogeny , Promoter Regions, Genetic/genetics , Genome, Plant , Genes, Plant
2.
Chem Commun (Camb) ; 60(10): 1301-1304, 2024 Jan 30.
Article in English | MEDLINE | ID: mdl-38197137

ABSTRACT

We report a general molecular design strategy of spatial proximity, which allows intramolecular [2+2] photocycloaddition reaction to take place in both single molecules and molecular aggregates. Sharply contrasting photoinduced fluorescence changes in solution and in the solid state were found and attributed to the aggregation-induced quenching property of the monomers and the aggregation-induced emission nature of the photodimers.

3.
J Chromatogr A ; 1714: 464550, 2024 Jan 11.
Article in English | MEDLINE | ID: mdl-38043167

ABSTRACT

Molecularly imprinted polymers (MIPs) possess high specific cavities towards the template molecules, thus solid-phase extraction (SPE) based on MIPs using the target as the template has been widely used for selective extraction. However, the performance of SPE depends strongly on the shape and the distribution of the MIP sorbents, and rapid synthesis of MIPs with uniform particles remains a challenge. Our previous studies have shown that reflux precipitation polymerization (RPP) was a simple and rapid method for the synthesis of uniform MIPs. However, synthesis of MIPs by RPP for a group of targets using only one of the targets as the template has rarely been reported. In this work, MIPs with specific recognition capability for a group of quinolone antibiotics were synthesized for the first time via RPP with only ofloxacin as the template. The synthesized MIPs displayed good adsorption performance and selectivity (IF > 3.5) towards five quinolones, and subsequently were used as SPE adsorbents. Based on this MIPs-SPE, after systematic optimization of the SPE operation parameters during loading, washing and elution, an efficient and sensitive enough SPE method for separation and enrichment of the five quinolones in urine was developed and evaluated in combination with LC-MS/MS. The results showed that MIPs-SPE-LC-MS/MS has a good correlation (R2 ≥ 0.9961) in the linear range of 1-500 µg L-1. The limit of detection (LOD) and limit of quantification (LOQ) for the five quinolones were 0.10-0.14 µg L-1 and 0.32-0.48 µg L-1, respectively. In addition, the proposed method demonstrated good reproducibility (≤ 13 %) and high accuracy (92 %-113 %). We are confident that this method holds significant promise for the analysis of quinolones within the contexts of forensic medicine, epidemiology, and environmental chemistry.


Subject(s)
Molecular Imprinting , Quinolones , Molecularly Imprinted Polymers , Chromatography, Liquid , Polymerization , Reproducibility of Results , Molecular Imprinting/methods , Polymers/chemistry , Tandem Mass Spectrometry , Solid Phase Extraction/methods , Anti-Bacterial Agents , Adsorption
4.
In Vivo ; 38(1): 341-350, 2024.
Article in English | MEDLINE | ID: mdl-38148081

ABSTRACT

BACKGROUND/AIM: X-linked hypophosphatemia (XLH), the most common form of hereditary rickets, results from loss-of-function mutations in the phosphate-regulating PHEX gene. Elevated fibroblast growth factor 23 (FGF23) contributes to hypophosphatemia in XLH. This study aimed to characterize PHEX variants and serum FGF23 profiles in Taiwanese patients with XLH. PATIENTS AND METHODS: We retrospectively reviewed the records of 102 patients clinically suspected of having hypophosphatemic rickets from 2006 to 2022. Serum intact Fibroblast growth factor-23 (iFGF23) levels were measured on clinic visit days. PHEX mutations were identified using Sanger sequencing, and negative cases were analyzed using whole-exome sequencing. RESULTS: The majority (92.1%) of patients exhibited elevated FGF23 compared with normal individuals. Among 102 patients, 44 distinct PHEX mutations were identified. Several mutations recurred in multiple unrelated Taiwanese families. We discovered a high frequency of novel PHEX mutations and identified variants associated with extreme FGF23 elevation and tumorigenesis. CONCLUSION: Our findings revealed the PHEX genotypic variants and FGF23 levels in Taiwanese patients with XLH. These results are crucial given the recent approval of burosumab, a monoclonal FGF23 antibody, for XLH therapy. This study provides key insights into the clinical management of XLH in Taiwan.


Subject(s)
Familial Hypophosphatemic Rickets , Humans , Antibodies, Monoclonal , Familial Hypophosphatemic Rickets/genetics , Familial Hypophosphatemic Rickets/metabolism , Fibroblast Growth Factors/genetics , Fibroblast Growth Factors/metabolism , Mutation , Neoplasm Recurrence, Local , PHEX Phosphate Regulating Neutral Endopeptidase/genetics , Retrospective Studies
5.
Molecules ; 28(13)2023 Jun 30.
Article in English | MEDLINE | ID: mdl-37446797

ABSTRACT

Phytochemical investigation on the fruits of C. tabularis led to the isolation of five new phragmalin-type limonoids (1-5) and four known ones (6-9). The structures of the new compounds 1-5, named chuktabamalins A-E, were elucidated via spectroscopic techniques (HRESIMS, 1D and 2D NMR) and were comparable with the literature data of known compounds. In addition, new compounds were evaluated for in vitro anti-inflammatory activity. Compounds 1, 2, 3 and 5 showed moderate anti-inflammatory activity with IC50 values of 21.72 ± 2.79, 23.29 ± 1.00, 47.08 ± 3.47 and 66.67 ± 2.89 µM, respectively.


Subject(s)
Limonins , Meliaceae , Molecular Structure , Limonins/pharmacology , Limonins/chemistry , Fruit , Magnetic Resonance Spectroscopy , Meliaceae/chemistry
6.
Chemistry ; 29(53): e202301520, 2023 Sep 21.
Article in English | MEDLINE | ID: mdl-37382237

ABSTRACT

Intermolecular [2+2] photodimerization provides a distinctive approach to construct photoresponsive fluorescent materials in a manner of switching on solid-state fluorescence. Herein, we report efficient photoactivation of bright solid-state fluorescence based on controllable intermolecular [2+2] photodimerization reaction of benzo[b]thiophene 1,1-dioxide (BTO) derivatives, which provides a simple and effective way to construct smart photoresponsive solid-state fluorescent materials. Rational choice of substituents in BTO molecular skeleton enables them to efficiently undergo photodimerization through regulating molecular stacking in crystal, and also leads to photoactivation of solid-state fluorescence due to the generation of brightly fluorescent photodimers. This intermolecular photodimerization reaction also offers an effective method to synthesize photostable AIEgens with purely through-space conjugation.

7.
Support Care Cancer ; 31(2): 120, 2023 Jan 17.
Article in English | MEDLINE | ID: mdl-36648565

ABSTRACT

PURPOSE: This study aimed to explore Chinese breast cancer patients' quality of sexual life (QSL) and factors associated with QSL. METHODS: The questionnaires in this cross-sectional study include the general information questionnaire, cognition and assessment of sexual health questionnaire, Self-acceptance Questionnaire (SAQ), Medical Coping Modes Questionnaire (MCMQ), and Quality of Sexual Life Questionnaire (QSLQ); 201 breast cancer patients were required to complete the questionnaires assessing characteristic information, cognition and assessment of sexual health, QSL, self-acceptance, and coping style. Finally, hierarchical regression was used to analyze the factors associated with QSL in Chinese breast cancer patients. RESULTS: The mean age (at the time of the survey) of the breast cancer patients was 48.31±9.15. The mean score of the QSLQ (range 28-140) was 75.14±16.57. Hierarchical regression analysis showed that the associated factors of breast cancer patients' QSL included age (at the time of the survey), education level, type of surgery, cognition and assessment of sexual health, self-acceptance, and avoidance and acceptance-resignation coping styles, that independent variables explained 60.4% of the variance. CONCLUSION: The QSL among Chinese breast cancer patients needs to be improved. Our findings indicated that breast cancer patients with older age, lower education level, or modified radical mastectomy have poor QSL. Breast cancer patients learn correct information about sexual health, enhance self-acceptance, and reduce acceptance-resignation, and avoidance coping could be intervention strategies to improve their QSL.


Subject(s)
Breast Neoplasms , Female , Humans , Adaptation, Psychological , Cross-Sectional Studies , East Asian People , Mastectomy , Quality of Life , Surveys and Questionnaires , China
8.
Biochem Biophys Res Commun ; 634: 75-82, 2022 12 17.
Article in English | MEDLINE | ID: mdl-36240652

ABSTRACT

This study examined the effects of aerobic exercise on the intestinal mucosal barrier dysfunction in diabetic rats. We established a diabetic rats model consisting of three groups: normal control (NC), diabetes control (DC), and diabetes eight-week aerobic exercise (DE). We measured serum fasting blood glucose (FBG), insulin (INS), diamine oxidase (DAO), D(-)-lactate (D-Lac), lipopolysaccharide (LPS), tumour necrosis factor-α (TNF-α), interleukin-6 (IL-6), and insulin resistance index (HOMA-IR). Intestinal sections of tissue were stained with H&E and examined using transmission electron microscopy. Expressions of occludin, claudin-1, toll-like receptor-4 (TLR4), myeloid differentiation primary response protein 88 (MyD88), and nuclear factor-κB (NF-κB) in small intestinal mucosa were determined by Western Blot. In comparison to NC, FBG, HOMA-IR, DAO, D-Lac, TNF-α, IL-6, and LPS were increased (P < 0.05) in DC, whereas INS, villus height, crypt depth, and mucosal thickness were decreased (P < 0.05). In comparison to DC, FBG, DAO, D-Lac, TNF-α, and LPS were decreased (P < 0.05) in DE, whereas INS, villus height, crypt depth, and mucosal thickness were increased (P < 0.05). In comparison to NC, occludin and claudin-1 were decreased (P < 0.05) in DC, whereas TLR4, MyD88, and NF-κB were increased (P < 0.05). In comparison to DC, occludin and claudin-1 were increased (P < 0.05) in DE, whereas TLR4, MyD88, and NF-κB were decreased (P < 0.05). In conclusion, eight-week aerobic exercise improved intestinal mucosal barrier dysfunction in diabetic rats, by inhibiting LPS release, TLR4/MyD88/NF-κB signaling pathway, and pro-inflammatory cytokines expression.


Subject(s)
Diabetes Mellitus, Experimental , NF-kappa B , Rats , Animals , NF-kappa B/metabolism , Toll-Like Receptor 4/metabolism , Myeloid Differentiation Factor 88/metabolism , Lipopolysaccharides/pharmacology , Tumor Necrosis Factor-alpha/metabolism , Occludin/metabolism , Interleukin-6/metabolism , Claudin-1/metabolism , Diabetes Mellitus, Experimental/therapy , Intestinal Mucosa/metabolism , Signal Transduction
9.
Mar Drugs ; 20(4)2022 Mar 28.
Article in English | MEDLINE | ID: mdl-35447904

ABSTRACT

Emodin, a hydroxyanthraquinone derivative, has been used as medicine for more than 2000 years due to its extensive pharmacological activities. Large-scale production of emodin has been achieved by optimizing the fermentation conditions of marine-derived Aspergillus flavus HN4-13 in a previous study. However, the fermentation broth contained complex unknown components, which adversely affected the study of emodin. Herein, the conditions for the enrichment of emodin from A. flavipes HN4-13 extract using XAD-16 resin were optimized, and a separation method with high efficiency, simple operation, a low cost, and a large preparative scale was established. The adsorption process of emodin on the XAD-16 resin conformed to pseudo-second-order kinetics and Langmuir models. The optimal conditions for the adsorption process were as follows: An emodin concentration, flow rate, and loading volume of 0.112 mg/mL, 2 BV/h, and 10 BV, respectively. For desorption, 50% ethanol was used to elute impurities and 80% ethanol was used to desorb emodin. After enrichment with XAD-16 resin, the emodin content increased from 1.16% to 11.48%, and the recovery rate was 75.53% after one-step treatment. These results demonstrate the efficiency of the simple adsorption-desorption strategy, using the XAD-16 resin for emodin enrichment.


Subject(s)
Emodin , Adsorption , Aspergillus , Ethanol , Plant Extracts
10.
J Pharm Pharmacol ; 74(4): 596-604, 2022 Apr 20.
Article in English | MEDLINE | ID: mdl-34089613

ABSTRACT

OBJECTIVES: The combination of gemcitabine (Gem) and hypericin (HY) enhances the apoptosis of Capan-2 cells, providing a promising option for the treatment of pancreatic cancer. Our study further explored the cytotoxic mechanism of HY combined with chemotherapy drugs on pancreatic cancer. METHODS: The proliferation rate of the cells assayed with the MTT method. The ROS (reactive oxygen species) levels of each treatment were evaluated by DCFH-DA oxidisation methods. The activity of glutathione reductase and the levels of reduced glutathione (GSH) and oxidised glutathione (GSSG) were assessed using assay kits. The expression levels of apoptosis-related proteins were analysed by western blotting. KEY FINDINGS: The activity of glucose-6-phosphate dehydrogenase (G6PDH), a key enzyme of the pentose phosphate pathway, significantly decreased in Gem + HY groups, however, the ROS level enhanced accompanying with GSH depleting, mitochondrial membrane depolarisation and cytochrome C release. Gem + HY inhibits the expression of Bcl-2 but stimulates Bax level, triggering caspase activation and PARP cleavage and thus promoted apoptosis of Capan-2 cells. CONCLUSIONS: We demonstrated that Gem combined HY-PDT could inhibit the proliferation of Capan-2 cells and induce cell apoptosis. HY-PDT combined with Gem had a great potential on pancreatic cancer treatment clinically.


Subject(s)
Pancreatic Neoplasms , Photochemotherapy , Anthracenes , Apoptosis , Cell Line, Tumor , Cell Proliferation , Deoxycytidine/analogs & derivatives , Humans , NADP , Pancreatic Neoplasms/drug therapy , Perylene/analogs & derivatives , Photochemotherapy/methods , Reactive Oxygen Species/metabolism , Gemcitabine , Pancreatic Neoplasms
11.
Front Psychol ; 12: 690898, 2021.
Article in English | MEDLINE | ID: mdl-34421742

ABSTRACT

Even though numerous studies have shown that adolescent empathy is positively related to bystander defending in school bullying, others have failed to detect a significant association between these two variables. To address this discrepancy, a three-level meta-analysis of 27 papers (35 independent studies, N = 25,012 adolescents) was conducted. The results showed that empathy was positively correlated with bystander defending. Furthermore, the strength of the relationship between empathy and bystander defending was moderated by the type of empathy and the evaluators of defending. Specifically, the correlation coefficient between affective empathy and bystander defending (r = 0.27, 95% CI [0.22, 0.32]) was significantly stronger than that between cognitive empathy and bystander defending (r = 0.22, 95% CI [0.17, 0.28]). Finally, the strength of the relationship between empathy and bystander defending was moderated by the evaluator of defending behavior. That is, the correlation coefficient of bystander defending measured by self-evaluation was significantly stronger than that measured by peer-evaluation. The results showed that empathy was closely related to bystander defending. Thus, school bullying can be prevented from the perspective of enhancing empathy among adolescents.

12.
ACS Synth Biol ; 10(1): 49-62, 2021 01 15.
Article in English | MEDLINE | ID: mdl-33395268

ABSTRACT

In recent years, many studies have been conducted on the expression of multiple aromatic compounds by Saccharomyces cerevisiae. The concentration of l-tyrosine, as a precursor of such valuable compounds, is crucial for the biosynthesis of aromatic metabolites. In this study, a novel function of HTZ1 was found to be related to tyrosine biosynthesis, which has not yet been reported. Knockout of this gene could significantly improve the ability of yeast cells to synthesize tyrosine, and its p-coumaric acid (p-CA) titer was approximately 3.9-fold higher than that of the wild-type strain BY4742. Subsequently, this strain was selected for random mutagenesis through an emerging mutagenesis technique, namely, atmospheric and room temperature plasma (ARTP). After two rounds of mutagenesis, five tyrosine high-producing mutants were obtained. The highest production of p-CA was 7.6-fold higher than that of the wild-type strain. Finally, transcriptome data of the htz1Δ strain and the five mutants were analyzed. The genome of mutagenic strains was also resequenced to reveal the mechanism underlying the high titer of tyrosine. This system of target engineering combined with random mutagenesis to screen excellent mutants provides a new basis for synthetic biology.


Subject(s)
Histones/genetics , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae/metabolism , Tyrosine/biosynthesis , Batch Cell Culture Techniques , Coumaric Acids/metabolism , Glucose/metabolism , Histones/deficiency , Metabolic Engineering , Mutagenesis , Phenotype , Plasmids/genetics , Plasmids/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Temperature , Transcriptome
13.
Food Chem ; 343: 128391, 2021 May 01.
Article in English | MEDLINE | ID: mdl-33268181

ABSTRACT

Deoxynivalenol (DON) is found widely in foods and feeds that are contaminated with mildew and is one of the most harmful mycotoxins, threating not only human health but also impacting animal husbandry. Various physical, chemical and biological detoxification strategies have been applied in the past to reduce mycotoxin contamination. As a practical and economic method, addition of montmorillonite (Mt) offers the potential to eliminate mycotoxins, especially aflatoxin B1 (AFB1) and zearalenone (ZEA). Our study aimed to control DON, for the first time, using environmentally friendly Mt, modified with aluminum, iron and titanium via a pillaring effect to enlarge interlayer spacing. The materials were characterized using XRD, FTIR, SEM, EDS and BET. Spacing of the pillared Mt layers was shown to exceed that of raw Mt and could be tuned using the pillaring reagents (Al, Fe and Ti, 0.01 to 2.00 eq. relative to the cation exchange capacity of Mt). Adsorption of DON by pillared Mt was investigated using UPLC-MSMS (at pH 2.0 and 6.8). The results demonstrated that the adsorption ratios of 1.00-Al-Mt, 0.50-Fe-Mt and 1.00-Ti-Mt were 23.6%, 14.7% and 23.4%, respectively at pH 2.0 and 27.1%, 21.8%, and 27.4% correspondingly at pH 6.8 when added at 1.0 mg, which is 3-4 times higher than raw Mt (6.3-6.8% at pH 2.0 and 7.3-8.1% at pH 6.8). It was also found that with increased addition of pillared Mt (2.5 mg), the adsorption ratio approached 35%. The time for reaching equilibrium was approximately 120 min. These results demonstrated that Mt after pillaring modifications with Al, Fe and Ti can have potential for the control of DON in foods and feeds.


Subject(s)
Bentonite/chemistry , Trichothecenes/chemistry , Adsorption , Aflatoxin B1/chemistry , Hydrogen-Ion Concentration , Kinetics , Zearalenone/chemistry
14.
3 Biotech ; 10(6): 258, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32550099

ABSTRACT

In this study, we applied a series of genetic modifications to wild-type S. cerevisiae strain BY4741 to address the bottlenecks in the l-tyrosine pathway. A tyrosine ammonia-lyase (TAL) gene from Rhodobacter capsulatus, which can catalyze conversion of l-tyrosine into p-coumaric acid, was overexpressed to facilitate the analysis of l-tyrosine and test the strain's capability to synthesize heterologous derivatives. First, we enhanced the supply of precursors by overexpressing transaldolase gene TAL1, enolase II gene ENO2, and pentafunctional enzyme gene ARO1 resulting in a 1.55-fold increase in p-coumaric acid production. Second, feedback inhibition of 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase and chorismate mutase was relieved by overexpressing the mutated feedback-resistant ARO4 K229L and ARO7 G141S , and a 3.61-fold improvement of p-coumaric acid production was obtained. Finally, formation of byproducts was decreased by deleting pyruvate decarboxylase gene PDC5 and phenylpyruvate decarboxylase gene ARO10, and p-coumaric acid production was increased 2.52-fold. The best producer-when TAL1, ENO2, ARO1, ARO4 K229L , ARO7 G141S , and TAL were overexpressed, and PDC5 and ARO10 were deleted-increased p-coumaric acid production by 14.08-fold (from 1.4 to 19.71 mg L-1). Our study provided a valuable insight into the optimization of l-tyrosine metabolic pathway.

15.
Phys Chem Chem Phys ; 22(26): 14781-14786, 2020 Jul 08.
Article in English | MEDLINE | ID: mdl-32578613

ABSTRACT

Two-dimensional (2D) nanomaterials with multiple characteristics are potential candidates as nanodevices for various applications. Herein, a family of 2D ScX2 (X = Cl, Br, or I) monolayers with functional properties are theoretically proposed to investigate their potential applications in spintronics and electronics. We show that these new nanomaterials possess ferromagnetic and semiconducting properties. The ScX2 monolayers hold intrinsic magnetism, which is ascribed to the ionic interaction between the Sc and X atoms. The magnetism is robust under repeated applied strains, which make them promising as flexible spintronic materials. Furthermore, we demonstrate that the ScX2 monolayers present semiconducting features and ultra-mobile carrier mobilities (∼103 cm2 V-1 s-1) benefited from their small deformation potentials. The carrier mobilities of the ScX2 monolayers are comparable with or more mobile than those of most 2D nanomaterials, which make them potential candidates as high-performance electronics. Our results suggest that the ScX2 monolayers may find various applications in flexible spintronics and electronics.

16.
ACS Synth Biol ; 9(4): 756-765, 2020 04 17.
Article in English | MEDLINE | ID: mdl-32155331

ABSTRACT

Caffeic acid is a plant phenolic compound possessing extensive pharmacological activities. Here, we identified that p-coumaric acid 3-hydroxylase from Arabidopsis thaliana was capable of hydroxylating p-coumaric acid to form caffeic acid in Saccharomyces cerevisiae. Then, we introduced a combined caffeic acid biosynthetic pathway into S. cerevisiae and obtained 0.183 mg L-1 caffeic acid from glucose. Next we improved the tyrosine biosynthesis in S. cerevisiae by blocking the pathway flux to aromatic alcohols and eliminating the tyrosine-induced feedback inhibition resulting in caffeic acid production of 2.780 mg L-1. Finally, the medium was optimized, and the highest caffeic acid production obtained was 11.432 mg L-1 in YPD medium containing 4% glucose. This study opens a route to produce caffeic acid from glucose in S. cerevisiae and establishes a platform for the biosynthesis of caffeic acid derived metabolites.


Subject(s)
Caffeic Acids , Glucose/metabolism , Metabolic Engineering/methods , Saccharomyces cerevisiae , Arabidopsis/enzymology , Arabidopsis/genetics , Caffeic Acids/chemistry , Caffeic Acids/metabolism , Coumaric Acids/chemistry , Coumaric Acids/metabolism , Metabolic Networks and Pathways , Mixed Function Oxygenases/genetics , Mixed Function Oxygenases/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism
17.
Biotechnol Lett ; 42(3): 453-460, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31863218

ABSTRACT

OBJECTIVE: To determine the effect of large genomic region deletion in a Saccharomyces cerevisiae strain on tyrosine yield and to identify new genetic modification targets through transcriptome analysis. RESULTS: TAL was used to produce p-coumaric acid (p-CA) from tyrosine to quantity tyrosine yield. S. cerevisiae mutant strain NK14 with deletion of a 23.8 kb genomic region was identified to have p-CA production of 10.3 mg L- 1, while the wild-type strain BY4741 had p-CA production of 1.06 mg L- 1. Analysis of growth patterns and stress tolerance showed that the deletion did not affect the growth phenotype of NK14. Transcriptome analysis suggested that, compared to BY4741, genes related to glycolysis (ENO2, TKL1) and the tyrosine pathway (ARO1, ARO2, ARO4, ARO7, TYR1) were upregulated in NK14 at different levels. Besides genes related to the tyrosine biosynthetic pathway, amino acid transporters (AVT6, VBA5, THI72) and transcription factor (ARO80) also showed changes in transcription levels. CONCLUSIONS: We developed a strain with improved tyrosine yield and identified new genetic modification candidates for tyrosine production.


Subject(s)
Gene Expression Profiling , Gene Expression Regulation, Fungal , Saccharomyces cerevisiae Proteins , Saccharomyces cerevisiae , Sequence Deletion , Transcriptome , Tyrosine/biosynthesis , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins/biosynthesis , Saccharomyces cerevisiae Proteins/genetics , Tyrosine/genetics
18.
Chinese Journal of School Health ; (12): 765-768, 2020.
Article in Chinese | WPRIM (Western Pacific) | ID: wpr-821963

ABSTRACT

Objective@#To understand indoor air quality in middle and primary schools of Hangzhou in autumn and winter seasons, and to provide references of promoting indoor air quality of schools.@*Methods@#Totally 33 classrooms of 11 schools in urban area were selected into study during Sept.2018 to Jan.2019. Daily measurements of PM2.5 and CO2 were performed in selected classes during school working time by air quality monitors. Totally, monitoring data of 35 964 hours were analyzed using univariate and multiplicity analysis for PM2.5 and CO2 level, variability and possible influence factors.@*Results@#In autumn and winter, hourly average values of classroom PM2.5 and CO2 concentration level in Hangzhou were between 35.30 to 74.65 μg/m3 and between 949.17 to 2 029.98 mg/m3, respectively. The concentration levels of PM2.5 and CO2 were higher with the temperature(F=1 412.84, 775.66, P<0.01). No statistical significance was be found for the difference of PM2.5 concentration among monitoring times. Wave changes in CO2 were observed with time variation PM2.5 and CO2 concentration level of 68.42% monitoring times was complied with standards. School type and temperature correlated with PM2.5 concentration level. The PM2.5 concentration level in senior high school was higher than that in junior high school, while the value in primary school was the minimum(β=0.44, P<0.01). And the PM2.5 concentration increased with the temperature decreased(β=8.31, P<0.01). School type, temperature and monitoring time correlated with CO2 concentration level. CO2 concentration increased with the increase of grade, decrease in temperature and later time during the day(β=213.64, 162.38, P<0.01). The CO2 concentration level in later monitoring time was lower than that in earlier monitoring time(β=-16.28, P<0.01).@*Conclusion@#Classroom CO2 concentration level in Hangzhou was closed to that in European schools, while PM2.5 concentration level was much higher. Comparing with other cities in China, classroom PM2.5 and CO2 concentration level in Hangzhou is better. The results highlighted that school location, design and routine management should be advanced consideration for good air quality in classroom.

19.
J Integr Plant Biol ; 61(8): 929-942, 2019 Aug.
Article in English | MEDLINE | ID: mdl-30253066

ABSTRACT

Commercial varieties of upland cotton (Gossypium hirsutum) have undergone extensive breeding for agronomic traits, such as fiber quality, disease resistance, and yield. Cotton breeding programs have widely used Chinese upland cotton source germplasm (CUCSG) with excellent agronomic traits. A better understanding of the genetic diversity and genomic characteristics of these accessions could accelerate the identification of desirable alleles. Here, we analyzed 10,522 high-quality single-nucleotide polymorphisms (SNP) with the CottonSNP63K microarray in 137 cotton accessions (including 12 hybrids of upland cotton). These data were used to investigate the genetic diversity, population structure, and genomic characteristics of each population and the contribution of these loci to heterosis. Three subgroups were identified, in agreement with their known pedigrees, geographical distributions, and times since introduction. For each group, we identified lineage-specific genomic divergence regions, which potentially harbor key alleles that determine the characteristics of each group, such as early maturity-related loci. Investigation of the distribution of heterozygous loci, among 12 commercial cotton hybrids, revealed a potential role for these regions in heterosis. Our study provides insight into the population structure of upland cotton germplasm. Furthermore, the overlap between lineage-specific regions and heterozygous loci, in the high-yield hybrids, suggests a role for these regions in cotton heterosis.


Subject(s)
Gossypium/physiology , Alleles , Genomics , Genotype , Gossypium/genetics , Hybrid Vigor/genetics , Hybrid Vigor/physiology , Plant Breeding , Quantitative Trait Loci/genetics
20.
Sci Total Environ ; 653: 536-546, 2019 Feb 25.
Article in English | MEDLINE | ID: mdl-30414583

ABSTRACT

This study explored the spatiotemporal variation of vegetation greenness and the mechanisms underlying this variation in the subtropical region of Guangdong in China during 2001-2013 to obtain a better understanding of vegetation response to climate and land use/cover changes in warm-humid regions. Satellite-based vegetation indices, land use/cover data and observed weather records during 2001-2013 were used. Univariate and multivariate linear regressions were conducted to quantify the trends and variations in vegetation greenness and the relationships with climate and land use/cover changes. The results indicated that the annual mean greenness trended upward significantly in eastern and western Guangdong and downward significantly in northern Guangdong. The patterns of significant positive or negative relationships between vegetation greenness and climatic factors were observed at the sub-regional scale. In addition, our results showed that (i) vegetation greenness in Guangdong was more sensitive to changes in temperature than in precipitation, (ii) spring temperature had an important time-lag effect on seasonal mean greenness in the following summer and autumn, and (iii) winter greenness depended largely on vegetation growth in the previous autumn. Furthermore, the conversion of grasslands and croplands to evergreen forests resulting from afforestation increased the vegetation greenness in eastern and western Guangdong. Overall, our results suggest that afforestation plays a dominant role in increasing vegetation cover/greenness in Guangdong whereas the effects of land use/cover change on vegetation growth are subject to climatic conditions. Thus, a better understanding of terrestrial vegetation dynamics requires considering both climate and land use/cover changes.


Subject(s)
Biota , Environmental Monitoring , Plant Physiological Phenomena , Remote Sensing Technology , Spatio-Temporal Analysis , China , Color , Linear Models , Plant Development , Seasons
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