Photoresponsive heparin ionic complexes toward controllable therapeutic efficacy of anticoagulation.

Controllable heparin-release is of great importance and necessity for the precise anticoagulant regulation. Efforts have been made on designing heparin-releasing systems, while, it remains a great challenge for gaining the external-stimuli responsive heparin-release in either intravenous or catheter delivery. In this study, an azobenzene-containing ammonium surfactant is designed and synthesized for the fabrication of photoresponsive heparin ionic complexes through the electrostatic complexation with heparin. Under the assistance of photoinduced trans-cis isomerization of azobenzene, the obtained heparin materials perform reversible athermal phase transition between ordered crystalline and isotropic liquid state at room temperature. Compared to the ordered state, the formation of isotropic state can effectively improve the dissolving of heparin from ionic materials in aqueous condition, which realizes the photo-modulation on the concentration of free heparin molecules. With good biocompatibility, such a heparin-releasing system addresses photoresponsive anticoagulation in both in vitro and in vivo biological studies, confirming its great potential clinical values. This work provides a new designing strategy for gaining anticoagulant regulation by light, also opening new opportunities for the development of photoresponsive drugs and biomedical materials based on biomolecules.

DNA liquid crystals with AIE effect toward humidity-indicating biomaterials.

In this study, by fabricating DNA doped with tetraphenylethene-containing ammonium surfactant, the resulting solvent-free DNA ionic complex could undergo a humidity-induced phase change that could be well tracked by the fluorescence signal of the surfactant. Taking advantage of the humidity-induced change in fluorescence, the reported ionic DNA complex could accurately indicate the humidity in real time.

Fluorescent Noncovalent Organic Framework for Supporting Gold Nanoparticles as Heterogeneous Catalyst with Merits of Easy Detection and Recycle.

A porous noncovalent organic framework with AIE effect is designed and synthesized as the support for gold nanoparticles (AuNPs). The framework is fabricated through the electrostatic complexation between carboxymethyl cellulose and tetraphenylethene-containing ammonium surfactant, which can complex AuNPs via the noncovalent interactions to offer a heterogeneous catalyst. Compared to the covalent modification on cellulose, this noncovalent framework gains superiorities in the catalyst synthesis and the size control of AuNPs. The AIE property and water-insolubility allow such heterogeneous catalysts to be easily detected, separated, and recycled, opening a new pathway for the reduction of nitrobenzene compounds and some dye compounds in aqueous conditions, which present the features of green chemistry. The use of cellulose for developing new heterogeneous metal catalysts, especially in a noncovalent way, would promote the value-added utilization of cellulose. This work provides a design strategy for gaining heterogeneous metal catalysts by taking advantage of natural bioresources.

Azobenzene-containing surfactant directs small features of DNA thermotropic liquid crystals via bottom-up and top-down strategies.

Compared to classical block copolymers, the self-assembly of small molecules shows an advantage in addressing small features. As a new type of solvent-free ionic complexes, azobenzene-containing DNA thermotropic liquid crystals (TLCs) form an assembly as block copolymers when using small DNA. However, the self-assembly behavior of such biomaterials has not been fully investigated. In this study, photoresponsive DNA TLCs are fabricated by employing an azobenzene-containing surfactant with double flexible chains. For these DNA TLCs, the self-assembly behavior of DNA and surfactants could be guided by the factors of the molar ratio of azobenzene-containing surfactant, dsDNA/ssDNA, and presence or absence of water, which addresses the bottom-up control on domain spacing of mesophase. Meanwhile, such DNA TLCs also gain top-down control on morphology via photoinduced phase change. This work would provide a strategy for regulating the small features of solvent-free biomaterials, facilitating the development of patterning templates based on photoresponsive biomaterials. STATEMENT OF SIGNIFICANCE: The relationship between nanostructure and function is attractive in the science of biomaterials. With biocompatibility and degradability, photoresponsive DNA materials in solutions have been widely studied in biological and medical areas, but they are still hard to obtain in a condensed state. The complex created with designed azobenzene-containing surfactants paves the way for obtaining condensed photoresponsive DNA materials. However, fine control of the small features of such biomaterials has not yet been achieved. In this study, we present a bottom-up strategy of controlling the small features of such DNA materials and, simultaneously, the top-down control of morphology via photoinduced phase change. This work provides a bi-directional approach to controlling the small features of condensed biomaterials.

Photoliquefiable Azobenzene Surfactants toward Solar Thermal Fuels that Upgrade Photon Energy Storage via Molecular Design.

Photoresponsive phase change materials (PPCMs) are capable of storing photon and heat energy simultaneously and releasing the stored energy as heat in a controllable way. While, the azobenzene-based PPCMs exhibit a contradiction between gravimetric energy storage density and photoinduced phase change. Here, a type of azobenzene surfactants with balance between molecular free volume and intermolecular interaction is designed in molecular level, which can address the coharvest of photon energy and low-grade heat energy at room temperature. Such PPCMs gain the total gravimetric energy density up to 131.18 J g-1 by charging solid sample and 160.50 J g-1 by charging solution. Notably, the molar isomerization enthalpy upgrades by a factor of up to 2.4 compared to azobenzene. The working mechanism is explained by the computational studies. All the stored energy can release out as heat under Vis light, causing a fast surface temperature rise. This study demonstrates a new molecular designing strategy for developing azobenzene-based PPCMs with high gravimetric energy density by improving the photon energy storage.

Correction: Photoregulative phase change biomaterials showing thermodynamic and mechanical stabilities.

Correction for 'Photoregulative phase change biomaterials showing thermodynamic and mechanical stabilities' by Lei Zhang et al., Nanoscale, 2022, 14, 976-983, https://doi.org/10.1039/D1NR06000G.

Thermodynamic stability of cis-azobenzene containing DNA materials based on van der Waals forces.

Taking advantage of van der Waals forces, an azobenzene-containing surfactant with a stable cis-state was designed and synthesized to fabricate photoresponsive DNA material. The reported DNA material exhibited reversible liquid crystalline-to-isotropic liquid transition under UV/Vis illuminations via the trans-cis isomerization of azobenzene. It also gained the ability to maintain the isotropic liquid state after UV light had ceased thanks to the thermodynamic stability of the cis-isomer of the azobenzene-containing surfactant. This work provides a design strategy for fabricating photoresponsive phase-change biomaterials.

Disordered Low Molecular Weight Spiropyran Exhibiting Photoregulated Adhesion Ability.

The functions of the materials composed of small molecules are highly dependent on their ordered molecular arrangements in both natural and artificial systems. Without ordered structure, small molecules hardly gain complicated functions, due to the absence of intermolecular covalent bond connection or strong network. Here, a low molecular weight spiropyran that could exhibit attractive photochromism and powerful adhesion property in disordered solid state is demonstrated. With maximum up to ∼8 MPa, the adhesion strength could be photoregulated in multiple levels, which also shows one-to-one correspondence to the specific color state. The working mechanism analysis on the photoregulated adhesion reveals that the isomer ratio of merocyanine form and the molecular packing density of spiropyran are the determining factors for the adhesion ability. The discovery of photoregulated adhesion from pure spiropyran provides a new strategy for developing functional materials by employing low molecular weight compounds.

Photoregulative phase change biomaterials showing thermodynamic and mchanical stabilities.

Azobenzenes are great photochromic molecules for switching the physical properties of various materials via trans-cis isomerization. However, the UV light resulted cis-azobenzene is metastable and thermodynamically gets back to trans-azobenzene after ceasing UV irradiation, which causes an unwanted property change of azobenzene-containing materials. Additionally, thermal and mechanical conditions would accelerate this process dramatically. In this present work, a new type of azobenzene-containing surfactant is designed for the fabrication of photoresponsive phase change biomaterials. With a "locked" cis-azobenzene conformation, the resulting biomaterials could maintain their disordered state after ceasing UV light, which exhibit great resistance to thermal and piezo conditions. Interestingly, the "locked" cis-azobenzene could be unlocked by Vis light in high efficiency, which opens a new way for the design of phase change materials only responding to light. By showing stable cis-azobenzene maintained physical state, the newly fabricated biomaterials provide new potential for the construction of advanced materials, like self-healing materials, with less use of long time UV irradiation for maintaining their disordered states.

Tailoring effects of the chain length and terminal substituent on the photochromism of solid-state spiropyrans.

Recently, by constructing a haloalkyl chain, a new class of solid-state spiropyrans showing advanced photochromic activity has been developed, but the tailoring effect of the haloalkyl chain on photochromism is unclear. Here, the photochromism of solid-state spiropyrans with different chain lengths and end substituents is investigated, which gives a clear correlation between the chain length/end substituent and the thermodynamic stability of zwitterionic merocyanine. This work provides a useful designing strategy for tailoring the photochromism of solid-state spiropyrans.

Photoliquefiable DNA-surfactant ionic crystals: Anhydrous self-healing biomaterials at room temperature.

Development of photoliquefiable solid-state biomaterials at room temperature would address scientific challenges in life science. However, external stimuli-induced phase transitions are difficult for some biomacromolecules based materials, due to the high rigidity of these biomolecules. In this present work, by delicate molecule design on azobenzene-type ammonium surfactants, two new types of DNA-surfactant materials are fabricated. At room temperature, these DNA materials show photoliquefaction of ionic crystals to isotropic liquids under UV light, and fast self-assembly from isotropic liquids back to crystals after ceasing UV light, under the assistance of azobenzene isomerization. To achieve this objective, the designed solid-state DNA materials should have melting points near room temperature and an immediate liquid crystal to isotropic liquid transition process just above the melting points, which highly depends on the stoichiometric charge ratio between DNA and surfactants. As proved by the successful self-healing tests, these DNA ionic crystals are good biomaterials with potential applications in biomedicine and life science. This work would provide a new strategy for designing anhydrous functional biomaterials at room temperature by using rigid biomacromolecules. STATEMENT OF SIGNIFICANCE: At room temperature, solid-state biomaterials with photoregulated crystal⇄isotropic liquid phase transition property are attractive functional materials in life science, considering the body temperature and living environment temperature of human beings. Although several kinds of anhydrous materials achieved isothermal photoresponsive phase transitions, the photoregulated phase transition of anhydrous biomacromolecules based materials has not been achieved at room temperature, due to the high rigidity of these biomolecules. In this work, by delicate molecule design on ammonium surfactants, we synthesized two kinds of anhydrous DNA-surfactants ionic crystals. These DNA materials show fast photoliquefaction under UV light and self-assembly after ceasing light, which affords excellent self-healing biomaterials. This work would provide a new strategy for designing anhydrous photoresponsive biomaterials by using rigid biomacromolecules.

Identifying knot types of polymer conformations by machine learning.

We investigate the use of artificial neural networks (NNs) as an alternative tool to current analytical methods for recognizing knots in a given polymer conformation. The motivation is twofold. First, it is of interest to examine whether NNs are effective at learning the global and sequential properties that uniquely define a knot. Second, knot classification is an important and unsolved problem in mathematical and physical sciences, and NNs may provide insights into this problem. Motivated by these points, we generate millions of polymer conformations for five knot types: 0, 3_{1}, 4_{1}, 5_{1}, and 5_{2}, and we design various NN models for classification. Our best model achieves a five-class classification accuracy of above 99% on a polymer of 100 monomers. We find that the sequential modeling ability of recurrent NNs is crucial for this result, as it outperforms feed-forward NNs and successfully generalizes to differently sized conformations as well. We present our methods and suggest that deep learning may be used in specific applications of knot detection where some error is permissible. Hopefully, with further development, NNs can offer an alternative computational method for knot identification and facilitate knot research in mathematical and physical sciences.

Selective mercury(ii) detection in aqueous solutions upon the absorption changes corresponding to the transition moments polarized along the short axis of an azobenzene chemosensor.

A completely water soluble azobenzene chemosensor 1 for selective detection of Hg2+ was synthesized. Taking advantage of the absorption changes corresponding to the transition moments polarized along the short axis of an azobenzene, 1 showed characteristic UV-Vis signal changes in the band around 240 nm for Hg2+ in wide pH ranges, which also showed good tolerance to various metal ions and photoirradiation. Upon addition of Hg2+ into the solution of 1, a favored formation of trans-1 was observed, which is attributed to an intramolecular coordination of the PEG chain and Nß to Hg2+ confirmed by a control experiment test.

Photoregulation between small DNAs and reversible photochromic molecules.

Oligonucleotides are widely used biological materials in the fields of biomedicine, nanotechnology, and materials science. Due to the demands for the photoregulation of DNA activities, scientists are placing more and more research interest in the interactions between reversible photochromic molecules and DNAs. Photochromic molecules can work as switches for regulating the DNAs' behavior under light irradiation; meanwhile, DNAs also exert influence over the photochromic molecules. The photochromic molecules can be attached to DNAs either by covalent bonds or by noncovalent forces, which results in different regulative functions. Azobenzenes, spiropyrans, diarylethenes, and stilbene-like compounds are important photochromic molecules working as photoswitches. By summarizing their interactions with oligonucleotides, this review intends to facilitate the relevant research on oligonucleotides/photochromic molecules in the biological and medicinal fields and in materials science.

Evaluation of two blood microsampling approaches for drug discovery PK studies in rats.

BACKGROUND: Serial sampling in discovery rat PK studies could be performed via capillary microsampling (CMS) of blood or by using the Mitra™ device to collect dried blood samples. RESULTS: Blood CMS results were compared with Mitra sampling results for four test compounds dosed in rat PK studies. The PK profiles obtained from CMS sampling were found to be very similar to those obtained from the Mitra sampling. For 15-µl blood CMS samples, freezing before the dilution step was found to be acceptable. CONCLUSION: Blood CMS using 15-µl glass capillary microsamples works well for serial blood sampling in rat PK studies. The Mitra microsampling device provides an alternative method for collecting 10 µl of blood as a dried blood sample.

Utility of capillary microsampling for rat pharmacokinetic studies: Comparison of tail-vein bleed to jugular vein cannula sampling.

INTRODUCTION: Serial sampling methods have been used for rat pharmacokinetic (PK) studies for over 20 years. Currently, it is still common to take 200-250 µL of blood at each timepoint when performing a PK study in rats and using serial sampling. While several techniques have been employed for collecting blood samples from rats, there is only limited published data to compare these methods. Recently, microsampling (≤ 50 µL) techniques have been reported as an alternative process for collecting blood samples from rats. METHODS: In this report, five compounds were dosed orally into rats. For three proprietary compounds, jugular vein cannula (JVC) sampling was used to collect whole blood and plasma samples and capillary microsampling (CMS) was used to collect blood samples from the tail vein of the same animal. For the two other compounds, marketed drugs fluoxetine and glipizide, JVC sampling was used to collect both whole blood and blood CMS samples while tail-vein sampling from the same rats was also used to collect both whole blood and blood CMS samples. RESULTS: For the three proprietary compounds, the blood AUC as well as the blood concentration-time profile that were obtained from the tail vein were different from those obtained via JVC sampling. For fluoxetine, the blood total exposure (AUC) was not statistically different when comparing tail-vein sampling to JVC sampling, however the blood concentration-time profile that was obtained from the tail vein was different than the one obtained from JVC sampling. For glipizide, the blood AUC and concentration-time profile were not statistically different when comparing the tail-vein sampling to the JVC sampling. For both fluoxetine and glipizide, the blood concentration profiles obtained from CMS were equivalent to the blood concentration profiles obtained from the standard whole blood sampling, collected at the same sampling site. DISCUSSION: The data in this report provide strong evidence that blood CMS is a valuable small volume blood sampling approach for rats and that it provides results for test compound concentrations that are equivalent to those obtained from traditional whole blood sampling. The data also suggest that for some compounds, the concentration-time profile that is obtained for a test compound based on sampling from a rat tail vein may be different from that obtained from rat JVC sampling. In some cases, this shift in the concentration-time profile will result in different PK parameters for the test compound. Based on these observations, it is recommended that a consistent blood sampling method should be used for serial microsampling in discovery rat PK studies when testing multiple new chemical entities. If the rat tail vein sampling method is selected for PK screening, then conducting a bridging study on the lead compound is recommended to confirm that the rat PK obtained from JVC sampling is comparable to the tail-vein sampling.

In vivo biosynthesis of terpene nucleosides provides unique chemical markers of Mycobacterium tuberculosis infection.

Although small molecules shed from pathogens are widely used to diagnose infection, such tests have not been widely implemented for tuberculosis. Here we show that the recently identified compound, 1-tuberculosinyladenosine (1-TbAd), accumulates to comprise >1% of all Mycobacterium tuberculosis lipid. In vitro and in vivo, two isomers of TbAd were detected that might serve as infection markers. Using mass spectrometry and nuclear magnetic resonance, we established the structure of the previously unknown molecule, N(6)-tuberculosinyladenosine (N(6)-TbAd). Its biosynthesis involves enzymatic production of 1-TbAd by Rv3378c followed by conversion to N(6)-TbAd via the Dimroth rearrangement. Intact biosynthetic genes are observed only within M. tuberculosis complex bacteria, and TbAd was not detected among other medically important pathogens, environmental bacteria, and vaccine strains. With no substantially similar known molecules in nature, the discovery and in vivo detection of two abundant terpene nucleosides support their development as specific diagnostic markers of tuberculosis.

Capillary microsampling of whole blood for mouse PK studies: an easy route to serial blood sampling.

BACKGROUND: Capillary microsampling (CMS) of 8 µl of blood provides a methodology that can be utilized for serial sampling in drug discovery mouse PK studies. RESULTS: Blood CMS sample results were compared to plasma sample results for three compounds (with expected Cb/Cp of 1 to 2) and found to be similar. In addition, for three compounds, blood CMS results were found to be equivalent to results generated with standard whole blood sampling. In a 5-day repeated dose PK study, four mice were dosed (IV) daily and sampled on both day one and day five using blood CMS procedure. CONCLUSION: Blood CMS using 8 µl glass capillary microsamples provides a straightforward and effective approach for mouse serial blood sampling.

Total synthesis of (R,R,R)-γ-tocopherol through Cu-catalyzed asymmetric 1,2-addition.

Based on the asymmetric copper-catalyzed 1,2-addition of Grignard reagents to ketones, (R,R,R)-γ-tocopherol has been synthesized in 36 % yield over 12 steps (longest linear sequence). The chiral center in the chroman ring was constructed with 73 % ee by the 1,2-addition of a phytol-derived Grignard reagent to an α-bromo enone prepared from 2,3-dimethylquinone.

A protecting group-free synthesis of the Colorado potato beetle pheromone.

A novel synthesis of the aggregation pheromone of the Colorado potato beetle, Leptinotarsa decemlineata, has been developed based on a Sharpless asymmetric epoxidation in combination with a chemoselective alcohol oxidation using catalytic [(neocuproine)PdOAc]2OTf2. Employing this approach, the pheromone was synthesized in 3 steps, 80% yield and 86% ee from geraniol.