Ability of Genomic Prediction to Bi-Parent-Derived Breeding Population Using Public Data for Soybean Oil and Protein Content.

Genomic selection (GS) is a marker-based selection method used to improve the genetic gain of quantitative traits in plant breeding. A large number of breeding datasets are available in the soybean database, and the application of these public datasets in GS will improve breeding efficiency and reduce time and cost. However, the most important problem to be solved is how to improve the ability of across-population prediction. The objectives of this study were to perform genomic prediction (GP) and estimate the prediction ability (PA) for seed oil and protein contents in soybean using available public datasets to predict breeding populations in current, ongoing breeding programs. In this study, six public datasets of USDA GRIN soybean germplasm accessions with available phenotypic data of seed oil and protein contents from different experimental populations and their genotypic data of single-nucleotide polymorphisms (SNPs) were used to perform GP and to predict a bi-parent-derived breeding population in our experiment. The average PA was 0.55 and 0.50 for seed oil and protein contents within the bi-parents population according to the within-population prediction; and 0.45 for oil and 0.39 for protein content when the six USDA populations were combined and employed as training sets to predict the bi-parent-derived population. The results showed that four USDA-cultivated populations can be used as a training set individually or combined to predict oil and protein contents in GS when using 800 or more USDA germplasm accessions as a training set. The smaller the genetic distance between training population and testing population, the higher the PA. The PA increased as the population size increased. In across-population prediction, no significant difference was observed in PA for oil and protein content among different models. The PA increased as the SNP number increased until a marker set consisted of 10,000 SNPs. This study provides reasonable suggestions and methods for breeders to utilize public datasets for GS. It will aid breeders in developing GS-assisted breeding strategies to develop elite soybean cultivars with high oil and protein contents.

Guest-host doped strategy for constructing ultralong-lifetime near-infrared organic phosphorescence materials for bioimaging.

Organic near-infrared room temperature phosphorescence materials have unparalleled advantages in bioimaging due to their excellent penetrability. However, limited by the energy gap law, the near-infrared phosphorescence materials (>650 nm) are very rare, moreover, the phosphorescence lifetimes of these materials are very short. In this work, we have obtained organic room temperature phosphorescence materials with long wavelengths (600/657-681/732 nm) and long lifetimes (102-324 ms) for the first time through the guest-host doped strategy. The guest molecule has sufficient conjugation to reduce the lowest triplet energy level and the host assists the guest in exciton transfer and inhibits the non-radiative transition of guest excitons. These materials exhibit good tissue penetration in bioimaging. Thanks to the characteristic of long lifetime and long wavelength emissive phosphorescence materials, the tumor imaging in living mice with a signal to background ratio value as high as 43 is successfully realized. This work provides a practical solution for the construction of organic phosphorescence materials with both long wavelengths and long lifetimes.

An Unexpected 4,5-Diphenyl-2,7-naphthyridine Derivative with Aggregation-Induced Emission and Mechanofluorochromic Properties Obtained from a 3,5-Diphenyl-4H-pyran Derivative.

For a specific fluorescent molecule, the increase of molecular conformation distortion is beneficial to endow it with aggregation-induced emission (AIE) and mechanofluorochromic (MFC) properties. Herein, 3,5-diphenyl-4H-pyran derivative 5 and 4,5-diphenyl-2,7-naphthidine derivative 7 with highly twisted conformations were synthesized. For compound 5, although the introduction of phenyl rings with large steric hindrance at 3 and 5 positions of the 4H-pyran skeleton realized the transformation from aggregation-induced quenching (ACQ)-active molecule to AIE-active molecule, it only showed a low-contrast MFC activity. Compound 7 was accidentally obtained from compound 5 and n-butylamine via a ring-opening and subsequent intramolecular ring-closing mechanism. Compound 7 was confirmed to have a highly twisted molecular conformation by the crystal structural analysis and exhibited AIE activity originated from the restriction of intramolecular rotation. Furthermore, compound 7 exhibited reversible high-contrast MFC activity. Upon grinding, the change of solid-state fluorescence color from orange to yellow was confirmed to be due to the partial destruction of crystal structure. This work provides new ideas for the design and synthesis of novel AIE-active and MFC-active fluorescent molecules based on ACQ-active parent molecules.

[Transcriptome analysis for leaves of five chemical types in Cinnamomum camphora].

Camphor tree (Cinnamomum camphora) is a representative species in Lauraceae family, and can be subdivided into five types: linalool, camphor, cineol, iso-nerolidol and borneol. In this paper, the leaves transcriptomes of Cinnamomum camphora were sequenced with the platform of Illumina HiSeq™ 2000. Based on the GO (Gene Ontology), COG (Clusters of Orthologous Groups), and KEGG (Kyoto Encyclopedia of Genes and Genomes) database, the function classification, pathway annotation, and the coding sequence prediction of all-Unigenes were carried out. 156 278 Unigenes with an average length of 584 bp and N50 (N50 value is defined as the Unigene length where half the assembly is represented by Unigenes of this size or longer) of 1 023 bp were generated by de novo assembly. A total of 5 5955 Unigenes (35.80%) were annotated through similarity comparison, in which 24 717 and 21 806 Unigenes were assigned into GO and COG, respectively. By searching KEGG database, 3 350 Unigenes were involved in biosynthesis of secondary metabolites, in which 424 Unigenes were involved in monoterpenoids, diterpenoids, sesquiterpenoids, and terpenoid backbone biosynthesis. The analysis of monoterpenoids biosynthesis pathway showed that 9 Unigenes likely encode (+)-linalool synthase, and their expression levels were higher in linalool type but lower in cineole type. This study provides a foundation for further characterizing the functional genes in C. camphora.

[Studies on pharmacological activity of borneol].

Borneol is a major component of many medicinal plant essential oils, as well as a popular traditional Chinese medicine. This essay collects the results of the latest domestic and foreign studies, and summarizes and analyzes its activity and reaction mechanism on analgesia, putridity elimination and flesh regeneration, and repair of damaged cells. Moreover, it proposes problems concerning borneol during medical studies, providing support for the in-depth study and exploration of efficacies of precious traditional Chinese medicines as well as the effective utilization and development of innovative medicines.

[Effects of land use change on soil labile organic carbon in Central Jiangxi of China].

Selecting the 15-year abandoned land (AL) and three forest lands [Phyllostachys edulis plantation (PE), Schima superba secondary forest (SS), and Cunninghamia Lanceolata plantation (CL)] in Anfu County of Jiangxi Province as test objects, this paper studied the effects of land use change on the soil organic carbon (SOC) pool and soil labile organic carbon (SLOC) contents. The soil organic carbon (SOC), microbial biomass carbon (MBC), hot- water extractable carbon (HWC), and readily oxidizable carbon (ROC) contents in the test lands were all in the order of PE>CL>SS>AL. As compared with those in AL, the SOC content, soil carbon stock, and soil labile organic carbon (SLOC) contents in the three forest lands all decreased with increasing soil depth, and had an obvious accumulation in surface soil. The proportions of different kinds of SLOC to soil total organic carbon differed markedly, among which, ROC had the highest proportion, while MBC had the smallest one. There existed significant relationships between SOC, MBC, HWC, and ROC. The MBC, HWC, and ROC contained higher content of active carbon, and were more sensitive to the land use change, being able to be used as the indicators for evaluating the soil quality and fertility in central Jiangxi Province.

[Effect of vanillin and P-hydroxybenzoic acid on physiological characteristics of Chinese fir seedlings].

Effects of vanillin and P-hydroxybenzoic acid at different concentrations on physiological characteristic of Chinese fir seedlings were studied by potted experiment. The results showed that 10 mmol.L-1 and 1 mmol.L-1 of two kinds of phenolics significantly reduced the content of chlorophyll, rate of photosynthesis and root activity, and that the higher the concentration of vanillin and P-hydroxybenzoic acid, the more the physiological activities was inhibited. By treatment with 1 and 10 mmol.L-1 vanillin, Chinese fir seedlings reduced its photosynthesis rate 25.1% and 37.0%, transpiration rate 20.3% and 37.0%, stomata conductance 33.7% and 46.8% and root activity 51.6% and 78.8%, respectively. The results suggested that vanillin and P-hydroxybenzoic acid accumulated in the soil by continuous cropping of Chinese fir may have some allelopathic effect on the seedlings of Chinese fir and the effect is one of the factors leading to the low productivity of continuously cropped Chinese fir forest.