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1.
Front Oncol ; 12: 946965, 2022.
Article in English | MEDLINE | ID: mdl-36578932

ABSTRACT

Objective: The diagnosis of prostate cancer has been a challenging task. Compared with traditional diagnosis methods, the radiofrequency (RF) signal is not only non-invasive but also rich in microscopic lesion information. This paper proposes a novel and accurate method for detecting prostate cancer based on the ultrasound RF signal. Method: Our approach is based on low-dimensional features in the frequency domain and high-throughput features in the spatial domain. The whole process could be divided into two parts: first, we calculate three feature maps from the ultrasound original RF signal, and 1,050 radiomics features are extracted from the three feature maps; second, we extracted 37 spectral features from the normalized frequency spectrum after Fourier transform. Results: We use LASSO regression as the method for feature selection; moreover, we use support vector machine (SVM) for classification 10-fold cross-validation for examining the classification performance of the SVM. An AUC (area under the receiver operating characteristic curve) of 0.84 was obtained on 71 subjects. Conclusions: Our method is feasible to detect prostate cancer based on the ultrasound RF signal with superior classification performance.

2.
Biomed Eng Online ; 21(1): 24, 2022 Apr 12.
Article in English | MEDLINE | ID: mdl-35413926

ABSTRACT

BACKGROUND: This study explored the feasibility of radiofrequency (RF)-based radiomics analysis techniques for the preoperative prediction of programmed cell death protein 1 (PD-1) in patients with hepatocellular carcinoma (HCC). METHODS: The RF-based radiomics analysis method used ultrasound multifeature maps calculated from the RF signals of HCC patients, including direct energy attenuation (DEA) feature map, skewness of spectrum difference (SSD) feature map, and noncentrality parameter S of the Rician distribution (NRD) feature map. From each of the above ultrasound maps, 345 high-throughput radiomics features were extracted. Then, the useful radiomics features were selected by the sparse representation method and input into support vector machine (SVM) classifier for PD-1 prediction. RESULTS AND CONCLUSION: Among all the RF-based prediction models and the ultrasound grayscale comparative model, the RF-based model using all of the three ultrasound feature maps had the highest prediction accuracy (ACC) and area under the curve (AUC), which were 92.5% and 94.23%, respectively. The method proposed in this paper is effective for the meaningful feature extraction of RF signals and can effectively predict PD-1 in patients with HCC.


Subject(s)
Carcinoma, Hepatocellular , Liver Neoplasms , Carcinoma, Hepatocellular/diagnostic imaging , Humans , Liver Neoplasms/diagnostic imaging , Programmed Cell Death 1 Receptor , Retrospective Studies
3.
Comput Methods Programs Biomed ; 199: 105875, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33340924

ABSTRACT

BACKGROUND: Chronic liver disease is an important cause of liver failure and death worldwide, and liver fibrosis is a common pathological process of most chronic liver diseases. There still lacks a useful tool for evaluating liver fibrosis progression precisely and non-invasively. The purpose of this study was to explore the use of ultrasound radio frequency (RF) signals combined with deep learning approach to evaluate the degree of liver fibrosis quantitatively. METHODS: In this study, by extracting the output of deep learning models as a prediction value, a quantitative liver fibrosis prediction method was achieved based on the bidirectional long short-term memory (Bi-LSTM) network to analyze radio frequency (RF) signals. The dataset consisted of 160 sets of ultrasound RF signals of rat livers, including five fibrosis stages 0-4, upon pathological diagnosis. In total, 150 sets of RF signals were used to train four deep learning classification models, the output of which contained quantitative information. In each training stage of the four models, a large number of signal segments were extracted from the 150 sets and divided randomly into training and validation sets in a ratio of 80:20. Ten sets of RF data using the gold standard of quantitative fibrosis parameter (q-FP) of liver tissues were left for independent testing. To validate the proposed method, correlation analysis was carried out between q-FP and the quantitative prediction results based on the independent test data. RESULTS: The accuracy of the four deep learning networks using the training and validation data was above 0.83 and 0.80, and the corresponding areas under the receiver operating characteristic curves were higher than 0.95 and 0.93, respectively. For the quantitative analysis in the independent test set, the determination coefficient, R2, of the linear regression analysis between the quantitative prediction results and q-FP was above 0.93. liver fibrosis is a common pathological process of most chronic liver diseases. CONCLUSIONS: This study indicates that a prediction system based on ultrasound RF signals and a deep learning approach is promising for realizing quantitative and visualized diagnosis of liver fibrosis, which would be of great value in monitoring liver fibrosis non-invasively.


Subject(s)
Liver Cirrhosis , Radio Waves , Animals , Liver/diagnostic imaging , Liver Cirrhosis/diagnostic imaging , ROC Curve , Rats , Ultrasonography
4.
Nat Commun ; 11(1): 4807, 2020 09 23.
Article in English | MEDLINE | ID: mdl-32968067

ABSTRACT

Non-invasive assessment of the risk of lymph node metastasis (LNM) in patients with papillary thyroid carcinoma (PTC) is of great value for the treatment option selection. The purpose of this paper is to develop a transfer learning radiomics (TLR) model for preoperative prediction of LNM in PTC patients in a multicenter, cross-machine, multi-operator scenario. Here we report the TLR model produces a stable LNM prediction. In the experiments of cross-validation and independent testing of the main cohort according to diagnostic time, machine, and operator, the TLR achieves an average area under the curve (AUC) of 0.90. In the other two independent cohorts, TLR also achieves 0.93 AUC, and this performance is statistically better than the other three methods according to Delong test. Decision curve analysis also proves that the TLR model brings more benefit to PTC patients than other methods.


Subject(s)
Lymphatic Metastasis/diagnosis , Machine Learning , Thyroid Cancer, Papillary/complications , Adult , Cohort Studies , Female , Humans , Lymph Nodes/pathology , Lymphatic Metastasis/pathology , Male , Middle Aged , ROC Curve , Thyroid Cancer, Papillary/pathology , Thyroid Neoplasms/pathology
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