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1.
Biomark Med ; 14(5): 353-369, 2020 04.
Article in English | MEDLINE | ID: mdl-32253914

ABSTRACT

Aim: Prostate cancer (PCa) is the sixth leading cause of cancer-related deaths in men throughout the world. This study aimed to investigate genes associated with the pathogenesis and prognosis of PCa. Materials & methods: Data of PCa cases were obtained from public datasets and were analyzed using an integrated bioinformatics strategy. Results: A total of 969 differential expression genes were identified. Moreover, GSE16560 and The Cancer Genome Atlas (TCGA) data showed a prognostic prompt function of the nine-gene signature, as well as in PCa with Gleason 7. Finally, majority of the nine hub genes were associated with drug sensitivity, mutational landscape, immune infiltrates and clinical characteristics of PCa. Conclusion: The nine-gene signature was correlated with drug sensitivity, mutational landscape, immune infiltrates, clinical characteristics and survival from PCa.


Subject(s)
Gene Expression Profiling , Genomics , Prostatic Neoplasms/genetics , Prostatic Neoplasms/pathology , Humans , Male , Neoplasm Staging , Prognosis , Prostatic Neoplasms/diagnosis
2.
Article in English | MEDLINE | ID: mdl-26773886

ABSTRACT

A sensitive and rapid ultra performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS) method was developed to determine tedizolid and linezolid in rat plasma simultaneously. Chromatographic separation was carried out on an Acquity UPLC BEH C18 column and mass spectrometric analysis was performed using a XEVO TQD triple quadruple mass spectrometer coupled with an electrospray ionization (ESI) source in the positive ion mode. Multiple reaction monitoring (MRM) mode was used for quantification using target fragment ions m/z 371.4→343.2 for tedizolid, and m/z 338.3→56.1 for linezolid. This assay method has been fully validated in terms of selectivity, linearity, recovery and matrix effect, accuracy, precision and stability. The linearity of this method was found to be within the concentration range of 5-5000ng/mL for tedizolid, and 10-10,000ng/mL for linezolid in rat plasma, respectively. Only 3.0min was needed for an analytical run. This assay was used to support a preclinical study where multiple oral doses were administered to rats to investigate the pharmacokinetics of tedizolid and linezolid.


Subject(s)
Chromatography, High Pressure Liquid/methods , Linezolid/blood , Linezolid/pharmacokinetics , Oxazolidinones/blood , Oxazolidinones/pharmacokinetics , Tandem Mass Spectrometry/methods , Tetrazoles/blood , Tetrazoles/pharmacokinetics , Animals , Limit of Detection , Linear Models , Linezolid/chemistry , Male , Oxazolidinones/chemistry , Rats , Rats, Sprague-Dawley , Reproducibility of Results , Tetrazoles/chemistry
3.
Anticancer Drugs ; 19(2): 159-66, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18176112

ABSTRACT

Although cisplatin has been shown to induce both apoptosis and necrosis in cancer cells, the potential interconnections between these modes of cell death induced by the drug remain unknown. We studied this phenomenon in gastric cancer cell lines and identified one cell line (SGC-7901) that underwent apoptosis, and another cell line (BGC-823) that primarily underwent nonapoptotic cell death, in response to cisplatin. Apoptosis in cisplatin-treated SGC-7901 cells seemed to be caspase dependent and was mediated, at least in part, by the BH3-only protein, Noxa. This was evidenced by the rapid upregulation of Noxa and inhibition of apoptosis by small interfering RNA knockdown of Noxa. Nonapoptotic cell death induced by cisplatin in BGC-823 cells was characterized by lack of DNA fragmentation, delayed externalization of phosphatidylserine, caspase independence, plasma membrane disruption, and intracellular vacuole formation, indicative of necrosis. Surprisingly, blockage of apoptosis induction by a general caspase inhibitor or by Noxa small interfering RNA in SGC-7901 failed to protect against cisplatin-induced cell death. Under such conditions, SGC-7901 cells displayed cellular features associated with necrosis. Cisplatin-induced apoptosis, thus, seems to precede necrosis when the apoptotic machinery is operative. When the apoptosis program is defective, necrotic cell death takes place as an alternative pathway leading to cell demise. Induction of different modes of cell death that are interrelated in the same cells by cisplatin has the potential to be exploited in formulating new adjuvant cancer therapies.


Subject(s)
Apoptosis/drug effects , Cisplatin/pharmacology , Adenosine Triphosphate/metabolism , Amino Acid Chloromethyl Ketones/pharmacology , Antineoplastic Agents/pharmacology , Blotting, Western , Butylated Hydroxytoluene/analogs & derivatives , Butylated Hydroxytoluene/metabolism , Caspase 3/genetics , Caspase 3/metabolism , Caspase Inhibitors , Caspases/genetics , Caspases/metabolism , Cell Line, Tumor , Cell Survival/drug effects , Cysteine Proteinase Inhibitors/pharmacology , DNA Fragmentation/drug effects , Dose-Response Relationship, Drug , Flow Cytometry , Humans , Intracellular Fluid/drug effects , Intracellular Fluid/metabolism , Microscopy, Electron, Transmission , Necrosis/chemically induced , Phosphatidylserines/metabolism , Proto-Oncogene Proteins c-bcl-2/metabolism , RNA, Small Interfering/genetics , Stomach Neoplasms/metabolism , Stomach Neoplasms/pathology , Stomach Neoplasms/ultrastructure , Transfection
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