Multi-parametric thrombus profiling microfluidics detects intensified biomechanical thrombogenesis associated with hypertension and aging.

Arterial thrombosis, which represents a critical complication of cardiovascular diseases, is a leading cause of death and disability worldwide with no effective bioassay for clinical prediction. As a symbolic feature of arterial thrombosis, severe stenosis in the blood vessel creates a high-shear, high-gradient flow environment that effectively facilitates platelet aggregation towards vessel occlusion even with platelet amplification loops inhibited. However, no approach is currently available to comprehensively characterize the size, composition and platelet activation status of thrombi forming under this biorheological condition. Here, we present a thrombus profiling assay that monitors the multi-dimensional attributes of thrombi forming in conditions mimicking the physiological scenario of arterial thrombosis. Using this platform, we demonstrate that different receptor-ligand interactions contribute distinctively to the composition and activation status of the thrombus. Our investigation into hypertensive and older individuals reveals intensified biomechanical thrombogenesis and multi-dimensional thrombus profile abnormalities, demonstrating a direct contribution of mechanobiology to arterial thrombosis and endorsing the diagnostic potential of the assay. Furthermore, we identify the hyperactivity of GPIbα-integrin αIIbß3 mechanosensing axis as a molecular mechanism that contributes to hypertension-associated arterial thrombosis. By studying the interactions between anti-thrombotic inhibitors and hypertension, and the inter-individual variability in personal thrombus profiles, our work reveals a critical need for personalized anti-thrombotic drug selection that accommodates each patient's pathological profile.

On the Friction Behavior of SiO2 Tip Sliding on the Au(111) Surface: How Does an Amorphous SiO2 Tip Produce Regular Stick-Slip Friction and Friction Duality?

Friction behaviors of an amorphous SiO2 tip sliding on the Au(111) surface in atomic force microscopy (AFM) are investigated through molecular dynamics (MD) simulations. We observed a regime of extremely low, close-to-zero friction at low normal loads with clear stick-slip friction signals. The friction is almost independent of the applied normal load below a threshold value. However, above this loading threshold, friction can remain low or increase sharply. Such an unexpected friction duality is attributed to the high probability of defect formation at the sliding interface that can induce plowing friction in a high-friction state. The energy difference between the low-friction state and the high-friction state is surprisingly low, which is comparable to kT (∼25 meV) at room temperature. These findings are consistent with previous AFM friction measurements using silicon AFM tips. Further MD simulations show that one can always use an amorphous SiO2 tip to image the crystalline surface with regular stick-slip friction signals. This is largely due to the fact that there is always a small fraction of contacting Si and O atoms at the sliding interface that are sitting on the relatively stable, close-to-hollow sites of the crystalline Au(111) surface during the stick stage; thus, they are capable of sampling local energy minima. We anticipate that regular stick-slip friction can be achieved even in the intermediate loading range, so long as the low-friction state is maintained when friction duality occurs.

Interfacial friction of vdW heterostructures affected by in-plane strain.

Interfacial properties of van der Waals (vdW) heterostructures dominate the durability and function of their booming practical and potential applications such as opoelectronic devices, superconductors and even pandemics research. However, the strain engineering modulates of interlayer friction of vdW heterostructures consisting of two distinct materials are still unclear, which hinders the applications of vdW heterostructures, as well as the design of solid lubricant and robust superlubricity. In the present paper, a molecular model between a hexagonal graphene flake and a rectangular SLMoS2sheet is established, and the influence of biaxial and uniaxial strain on interlayer friction is explored by molecular dynamics. It is found that the interlayer friction is insensitive to applied strains. Strong robustness of superlubricity between distinct layers is owed to the structure's intrinsic incommensurate characteristics and the existence of Moiré pattern. In engineering practice, it is of potential importance to introduce two distinct 2D materials at the sliding contact interface to reduce the interfacial friction of the contact pair and serve as ideal solid lubricants. Our research provides a further basis to explore the nanotribology and strain engineering of 2D materials and vdW heterostructures.

Will Polycrystalline Platinum Tip Sliding on a Gold(111) Surface Produce Regular Stick-Slip Friction?

Friction measurements by an atomic force microscope (AFM) frequently showed regular stick-slip friction signals with atomic-scale resolutions. Typically, for an AFM metal tip sliding on a metal crystal surface, the microstructure of the tip made from the thermally evaporated metal coating on a silicon cantilever was polycrystalline. Our detailed molecular dynamics(MD) simulations of a polycrystalline Pt tip (R = 10 nm in radius) sliding on an Au(111) surface revealed how the geometry of the polycrystalline tip took effect on the friction behavior at the contact interface. We found that the apex of the Pt tip with multiple grains near the edge of contact could induce severe plastic deformations of the gold substrate, leading to irregular stick-slip frictions upon sliding. Simulation results showed that in order to achieve a clear stick-slip friction signal with single atomic slips, the apex of the Pt tip must adopt a single crystalline protrusion without any neighboring grains involved in the metal contact. We showed that such a single crystalline protrusion, which presumably could be achieved during initial run-in or wear-out of high-energy Pt atoms in the neighboring grains, was passivated by a large number of gold atoms due to metal adhesion in the contact periphery. Using such a crystalline protrusion tip, we demonstrated that the stick-slip friction produced was very "tolerant" to the adhesion of a large number of gold atoms on the tip apex. We further showed that AFM tip mass used in MD simulations also played an important role in determining the transition between friction regimes, which could be well explained by the Prandtl-Tomlinson thermal activation model.

Nucleation of Frank Dislocation during the Squeeze-Out Process in Boundary Lubrication: A Molecular Dynamics Study.

Liquid-vapor molecular dynamics (LVMD) simulations are performed to reinvestigate the phase transition and solvation force oscillation behavior of a simple argon liquid film confined between two solid surfaces. Our simulations present a novel scenario in which the n → n - 1 layering transitions are accompanied by the formation, climb, and annihilation of Frank partial dislocations during the squeeze-out process under compression. This is indicated by the splitting of the repulsive peaks in the solvation force profile. The detailed analysis reveals that the formation-climb-annihilation mechanism of Frank dislocation occurs during approach and disappears during receding, which would result in force hysteresis. In combination with our recent works, this study provides new insights into the physical property of nanoconfined lubricant films in boundary lubrication.

Colloidal Shear-Thickening Fluids Using Variable Functional Star-Shaped Particles: A Molecular Dynamics Study.

Complex colloidal fluids, depending on constituent shapes and packing fractions, may have a wide range of shear-thinning and/or shear-thickening behaviors. An interesting way to transition between different types of such behavior is by infusing complex functional particles that can be manufactured using modern techniques such as 3D printing. In this paper, we perform 2D molecular dynamics simulations of such fluids with infused star-shaped functional particles, with a variable leg length and number of legs, as they are infused in a non-interacting fluid. We vary the packing fraction (ϕ) of the system, and for each different system, we apply shear at various strain rates, turning the fluid into a shear-thickened fluid and then, in jammed state, rising the apparent viscosity of the fluid and incipient stresses. We demonstrate the dependence of viscosity on the functional particles' packing fraction and we show the role of shape and design dependence of the functional particles towards the transition to a shear-thickening fluid.

A Molecular Dynamics Simulations Study of the Influence of Prestrain on the Pop-In Behavior and Indentation Size Effect in Cu Single Crystals.

The pop-in effect in nanoindentation of metals represents a major collective dislocation phenomenon that displays sensitivity in the local surface microstructure and residual stresses. To understand the deformation mechanisms behind pop-ins in metals, large scale molecular dynamics simulations are performed to investigate the pop-in behavior and indentation size effect in undeformed and deformed Cu single crystals. Tensile loading, unloading, and reloading simulations are performed to create a series of samples subjected to a broad range of tensile strains with/without pre-existing dislocations. The subsequent nanoindentation simulations are conducted to investigate the coupled effects of prestrain and the presence of resulting dislocations and surface morphology, as well as indenter size effects on the mechanical response in indentation processes. Our work provides detailed insights into the deformation mechanisms and microstructure-property relationships of nanoindentation in the presence of residual stresses and strains.

Molecular Understanding of Ion Effect on Polyzwitterion Conformation in an Aqueous Environment.

Polyzwitterions (PZs) are promising materials for the antifouling in reverse osmosis and nanofiltration membrane technology for water treatment. Fundamental understanding of the structure and molecular interactions involving zwitterions is crucial to the optimal design of antifouling in membrane separation. Here we employ the umbrella sampling and molecular dynamics simulations to investigate molecular interactions between sulfobetaine/carboxybetaine zwitterions and different metal ions (Na+, K+, and Ca2+) in an aqueous solution. The simulation results show that these ions can form stable or metastable contact ionic/solvent-shared-ionic pairs with zwitterions. Simulations at different grafting densities of PZ brush arrays reveal complex competitive association mechanisms, which are attributed to nonbonded electrostatic and van der Waals interactions among zwitterions, water molecules, and different metal ions in an aqueous environment. While the high-grafting density of the PZ brush array leads to a strong branch association between different zwitterions in water, this association is decreased at intermediate- and low-grafting densities due to strong zwitterion-water interactions. More importantly, adding ions into water at intermediate- and low-grafting densities further breaks down the zwitterion branch association, resulting in a randomly oriented and dispersed branch configuration with significant swelling of the polymers. The degree of swelling depends on the type of ions, which further changes the surface electrostatic potential of PZ coatings.

On the shear dilation of polycrystalline lubricant films in boundary lubricated contacts.

Shearing of a solidified polycrystalline lubricant film confined between two solid surfaces has been studied by molecular dynamics simulations. In the case of a perfect commensurate contact, we observe interlayer slips within the film and shear-induced order-to-disorder transition of lubricant molecules around grain boundaries. This process is accompanied by the nucleation, propagation, and annihilation of dislocations in the solidified film, resulting in repeated dilation and collapse of the lubricant film during the stick-slip motion. In the case of an incommensurate contact, only slips at the lubricant-solid interface happen and no dilation of the lubricant film is observed during the stick-slip friction. These observations are consistent with recent surface force balance experimental measurements. In combination with our recent work [R. G. Xu and Y. S. Leng, Proc. Natl. Acad. Sci. U. S. A. 115, 6560 (2018)], this study provides a renewed picture on the physical property of nanoconfined lubricant films in boundary lubrication.

Squeezing and stick-slip friction behaviors of lubricants in boundary lubrication.

The fundamental questions of how lubricant molecules organize into a layered structure under nanometers confinement and what is the interplay between layering and friction are still not well answered in the field of nanotribology. While the phase transition of lubricants during a squeeze-out process under compression is a long-standing controversial debate (i.e., liquid-like to solid-like phase transition versus amorphous glass-like transition), recent different interpretations to the stick-slip friction of lubricants in boundary lubrication present new challenges in this field. We carry out molecular dynamics simulations of a model lubricant film (cyclohexane) confined between molecularly smooth surfaces (mica)--a prototypical model system studied in surface force apparatus or surface force balance experiments. Through fully atomistic simulations, we find that repulsive force between two solid surfaces starts at about seven lubricant layers (n = 7) and the lubricant film undergoes a sudden liquid-like to solid-like phase transition at n < 6 monolayers thickness. Shear of solidified lubricant films at three- or four-monolayer thickness results in stick-slip friction. The sliding friction simulation shows that instead of shear melting of the film during the slip of the surface, boundary slips at solid-lubricant interfaces happen, while the solidified structure of the lubricant film is well maintained during repeated stick-slip friction cycles. Moreover, no dilation of the lubricant film during the slip is observed, which is surprisingly consistent with recent surface force balance experimental measurements.

Molecular Simulations of the Hydration Behavior of a Zwitterion Brush Array and Its Antifouling Property in an Aqueous Environment.

We carried out umbrella sampling and molecular dynamics (MD) simulations to investigate molecular interactions between sulfobetaine zwitterions or between sulfobetaine brushes in different media. Simulation results show that it is more energetically favorable for the two sulfobetaine zwitterions or brushes to be fully hydrated in aqueous solutions than in vacuum where strong ion pairs are formed. Structural properties of the hydrated sulfobetaine brush array and its antifouling behavior against a foulant gel are subsequently studied through steered MD simulations. We find that sulfobetaine brush arrays with different grafting densities have different structures and antifouling mechanisms. At a comparably higher grafting density, the sulfobetaine brush array exhibits a more organized structure which can hold a tightly bound hydration water layer at the interface. Compression of this hydration layer results in a strong repulsive force. However, at a comparably lower grafting density, the brush array exhibits a randomly oriented structure in which the antifouling of the brush array is through the deformation of the sulfobetaine branches.

Computational simulations of solvation force and squeezing out of dodecane chain molecules in an atomic force microscope.

Understanding the squeeze out behaviors of liquid films at nanometer scale in an atomic force microscope (AFM) has been a significant interest since the 1990s. We carry out all-atom static-mode AFM simulations in a liquid-vapor molecular dynamics ensemble to investigate the solvation force oscillation and squeeze out mechanisms of a confined linear dodecane fluid between a gold AFM tip and a mica substrate. Solvation force oscillations are found to be associated with the layering transition of the liquid film and unstable jumps of the AFM tip. Detailed structural analyses and molecular animations show that the local permeation of chain molecules and the squeeze out of molecules near the edge of contact promote the layering transition under compression. The confinement-induced slow down dynamics is manifested by the decrease in diffusivity and increase in rotational relaxation times. However, the persistent diffusive behavior of dodecane chain molecules even in the single-monolayer film is attributed to the chain sliding motions in the film due to the substantial vacancy space and thermal fluctuations.

Contact stiffness and damping of liquid films in dynamic atomic force microscope.

The mechanical properties and dissipation behaviors of nanometers confined liquid films have been long-standing interests in surface force measurements. The correlation between the contact stiffness and damping of the nanoconfined film is still not well understood. We establish a novel computational framework through molecular dynamics (MD) simulation for the first time to study small-amplitude dynamic atomic force microscopy (dynamic AFM) in a simple nonpolar liquid. Through introducing a tip driven dynamics to mimic the mechanical oscillations of the dynamic AFM tip-cantilever assembly, we find that the contact stiffness and damping of the confined film exhibit distinct oscillations within 6-7 monolayer distances, and they are generally out-of-phase. For the solid-like film with integer monolayer thickness, further compression of the film before layering transition leads to higher stiffness and lower damping, while much lower stiffness and higher damping occur at non-integer monolayer distances. These two alternating mechanisms dominate the mechanical properties and dissipation behaviors of simple liquid films under cyclic elastic compression and inelastic squeeze-out. Our MD simulations provide a direct picture of correlations between the structural property, mechanical stiffness, and dissipation behavior of the nanoconfined film.

Molecular Dynamics Simulations of a Poly(ethylene glycol)-Grafted Polyamide Membrane and Its Interaction with a Calcium Alginate Gel.

Molecular dynamics simulations are carried out to investigate the antifouling property of a polyethylene glycol (PEG)-grafted polyamide (PA) membrane. Our specific interest is the computational study of the interaction between a grafted PEG coating and an alginate gel foulant by a steered molecular dynamics approach. Simulation results show that the PEG coating can hold a tightly bound hydration water layer. When the alginate gel is dragged to approach the PEG coating surface, a strong repulsive hydration force is observed due to the compression of this hydration layer. Detailed calculations of the potential of mean force (PMF) show that the repulsive interaction between the alginate gel and the hydration water layer around the PEG coating has a dominant contribution to the total repulsive PMF. We have also studied the effect of the PEG coverage on the membrane-foulant interactions. We find that the alginate gel has a strong tendency to drift to the uncovered PA membrane surfaces (namely, the PEG hollows). However, direct attachment of the gel to the PA membrane surface can be avoided if the gel size is slightly larger than the PEG hollow site.

Solvation force simulations in atomic force microscopy.

Solvation force oscillation in octamethylcyclotetrasiloxane (OMCTS) versus the distance between an atomic force microscope (AFM) tip and mica substrate has been studied through molecular dynamics simulations. A driving spring model in a liquid-vapor molecular ensemble is used to explore the force oscillation mechanism. It has been found that OMCTS fluid in tip-substrate contact has a strong tendency to form a layered structure, starting from n = 8 layers. The force profile obtained from simulation is qualitatively similar to those in contact mode AFM experiments. However, the bulk-like diffusion and rotation of OMCTS molecules underneath the AFM tip suggest that, under the tip-substrate confinement geometry, the layered OMCTS film cannot form a solidified structure except under n = 2 extreme contact-layer confinement.