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1.
Mar Pollut Bull ; 205: 116589, 2024 Jun 13.
Article in English | MEDLINE | ID: mdl-38875970

ABSTRACT

Airborne bacteria along with chemical composition of aerosols were investigated during five sampling seasons at an offshore island of the East China Sea. Bacterial diversity was the lowest in spring, the highest in winter, and similar between the autumns of 2019 and 2020, suggesting remarkably seasonal variation but little interannual change. Geodermatophilus (Actinobacteria) was the indicator genus of mineral dust (MD) showed higher proportion in spring than in other seasons. Mastigocladopsis_PCC-10914 (Cyanobacteria) as the indicator of sea salt (SS) demonstrated the highest percentages in both autumns, when the air masses mainly passed over the ocean prior to the sampling site. The higher proportions of soil-derived genera Rubellimicrobium and Craurococcus (both Proteobacteria) and extremophile Chroococcidiopsis_SAG_2023 (Cyanobacteria) were found in summer and winter, respectively. Our study explores the linkage between aerosol source and transport path and bacterial composition, which has implication to understanding of land-sea transmission of bacterial taxa.

2.
Environ Sci Technol ; 57(34): 12741-12751, 2023 08 29.
Article in English | MEDLINE | ID: mdl-37578487

ABSTRACT

Marine biological activities make a non-negligible contribution to atmospheric aerosols, leading to potential impacts on the regional atmospheric environment and climate. The eastern China seas are highly productive with significant emissions of biogenic substances, but the spatiotemporal variations of marine biogenic aerosols are not well known. Air mass exposure to chlorophyll a (AEC) can be used to indicate the influence of biogenic sources on the atmosphere to a certain degree. In this study, the 12 year (2009-2020) daily AEC were calculated over the eastern China seas, showing the spatial and seasonal patterns of marine biogenic influence intensity which were co-controlled by surface phytoplankton biomass and boundary layer height. By combining the AEC values, relevant meteorological parameters, and extensive observations of a typical biogenic secondary aerosol component, methanesulfonate (MSA), a parameterization scheme for MSA simulation was successfully constructed. This AEC-based approach with observation constraints provides a new insight into the distribution of marine biogenic aerosols. Meanwhile, the wintertime air mass retention over land exhibited a significant decrease, showing a decadal weakening trend of terrestrial transport, which is probably related to the weakening of the East Asian winter monsoon. Thus, marine biogenic aerosols may play an increasingly important role in the studied region.


Subject(s)
Air Pollutants , Air Pollutants/analysis , Chlorophyll A , Oceans and Seas , China , Atmosphere/analysis , Seasons , Aerosols/analysis , Environmental Monitoring
3.
Sci Total Environ ; 875: 162581, 2023 Jun 01.
Article in English | MEDLINE | ID: mdl-36889406

ABSTRACT

Airborne bacteria may have significant impacts on aerosol properties, public health and ecosystem depending on their taxonomic composition and transport. This study investigated the seasonal and spatial variations of bacterial composition and richness over the east coast of China and the roles of East Asian monsoon played through synchronous sampling and 16S rRNA sequencing analysis of airborne bacteria at Huaniao island of the East China Sea (ECS) and the urban and rural sites of Shanghai. Airborne bacteria showed higher richness over the land sites than Huaniao island with the highest values found in the urban and rural springs associated with the growing plants. For the island, the maximal richness occurred in winter as the result of prevailing terrestrial winds controlled by East Asian winter monsoon. Proteobacteria, Actinobacteria and Cyanobacteria were found to be top three phyla, together accounting for 75 % of total airborne bacteria. Radiation-resistant Deinococcus, Methylobacterium belonging to Rhizobiales (related to vegetation) and Mastigocladopsis_PCC_10914 originating from marine ecosystem were indicator genera for urban, rural and island sites, respectively. The Bray-Curits dissimilarity of taxonomic composition between the island and two land sites was the lowest in winter with the representative genera over island also typically from the soil. Our results reveal that seasonal change of monsoon wind directions evidently affects the richness and taxonomic composition of airborne bacteria in China coastal area. Particularly, prevailing terrestrial winds lead to the dominance of land-derived bacteria over the coastal ECS which may have a potential impact on marine ecosystem.


Subject(s)
Air Microbiology , Bacteria , Ecosystem , Wind , China , Cyanobacteria , RNA, Ribosomal, 16S/genetics , Bacteria/genetics , Bacteria/isolation & purification , Air , Seasons , Environment
4.
Mitochondrial DNA B Resour ; 7(2): 348-349, 2022.
Article in English | MEDLINE | ID: mdl-35174286

ABSTRACT

The complete mitochondrial genome of Sydaphera spengleriana was characterized for the first time. The total length of the mitogenome was 16,336 bp including a standard set of 13 protein-coding (PCGs), 22 transfer RNA (tRNA), and 2 ribosomal RNA (rRNA) genes. The overall nucleotides base composition of the heavy strand is A (26.44%), G (19.89%), C (13.25%), and T (40.41%), with an A + T bias (66.85%). With the exception of eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. The mitogenomic phylogenetic relationships indicated that S. spengleriana was clustered with Bivetiella cancellata within the family Cancellariidae clade with a high bootstrap value.

5.
Mitochondrial DNA B Resour ; 4(2): 4116-4117, 2019 Nov 20.
Article in English | MEDLINE | ID: mdl-33366344

ABSTRACT

In this study, the complete mitochondrial genome of the Aphrodita australis was sequenced. The complete mitochondrial genome was circular and 15,288 bp in length, consisted of a typical set of 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and 1 non-coding control region. All these genes are in the heavy strand. The non-coding control region is 672 bp in length, and located between tRNA-Ser and tRNA-Leu. The overall nucleotides base composition of the heavy strand is 31.02% for A, 22.76% for C, 12.49% for G, and 33.73% for T, with a slight A + T-rich feature (64.75%). All of the PCGs begin with ATG as their start codon and the cox 3, cytb and nad 3 are terminated with TAA, atp8, nad4, nad 4l, and nad 6 are terminated with TAG, while others are terminated by incomplete codon T. Seen from the phylogenetic tree, A. australis has a more close relationship with Goniada japonica than other species.

6.
Gene ; 673: 225-238, 2018 Oct 05.
Article in English | MEDLINE | ID: mdl-29933020

ABSTRACT

The complete mitochondrial genome is greatly important for studies on genetic structure and phylogenetic relationship at various taxonomic levels. To obtain information about the evolutionary trends of mtDNA in the Ulvophyceae and also to gain insights into the phylogenetic relationships between ulvophytes and other chlorophytes, we determined the mtDNA sequence of Caulerpa lentillifera (sea grape) using de novo mitochondrial genome sequencing. The complete genomic DNA of C. lentillifera was circular and 209,034 bp in length, and it was the largest green-algal mitochondrial genome sequenced to date, with a low gene density of 65.2%, which is reminiscent of the "expanded" pattern of evolution exhibited by embryophyte mtDNAs. The C. lentillifera mtDNA consisted of a typical set of 17 protein-coding genes (PCGs), 20 transfer RNA (tRNA) genes, three ribosomal RNA (rRNA) genes, 42 putative open reading frames (ORFs) and 29 introns, which had homologs in green-algal mtDNAs displaying an "ancestral" or a "reduced-derived" pattern of evolution. The overall base composition of its mitochondrial genome was 24.19% for A, 24.94% for T, 25.80% for G, 25.07% for C and 50.87% for GC. The mitochondrial genome of C. lentillifera was characterized by numerous small intergenic regions and introns, which was clearly different from other green algae. With the exception of the NADH dehydrogenase subunit 6 (ND6), ND1, ATP and three tRNA genes (tRNA-His, tRNA-Thr and tRNA-Ala), all other mitochondrial genes were encoded on the heavy strand. All of the PCGs had ATG as their start codon and employed TAA, TGA or TAG as their termination codon. To gain insights into the evolutionary trends of mtDNA in the Ulvophyceae, we inferred the complete mtDNA sequence of C. lentillifera, an ulvophyte belonging to a distinct, early-diverging lineage. Taken together, our data offered useful information for the studies on phylogenetic hypotheses and phylogenetic relationships of C. lentillifera within the Chlorophyta.


Subject(s)
Caulerpa/genetics , DNA, Mitochondrial/genetics , Genome, Mitochondrial , DNA, Algal/genetics , Evolution, Molecular , Gene Library , Genome , Introns , Nucleic Acid Conformation , Open Reading Frames , Phylogeny , RNA, Ribosomal/genetics , RNA, Transfer/genetics
7.
Di Yi Jun Yi Da Xue Xue Bao ; 23(6): 566-8, 571, 2003 Jun.
Article in Chinese | MEDLINE | ID: mdl-12810377

ABSTRACT

OBJECTIVE: To investigate the relationship between aquaporin-4 (AQP4) water channel expression in astrocytes and brain edema caused by glioma. METHODS: The changes of water transport in in vitro blood-brain barrier models were examined using high-performance liquid chromatography (HPLC), and the expression level of AQP4 was assayed by semiquantitative RT-PCR. RESULTS: The water transport of the in vitro blood-brain barrier model from the luminal side to basolateral side was increased after coculture with glioma cells, which induced significantly decreased expression level of AQP4 in the astrocytes. CONCLUSIONS: Glioma cells can promote water transport in in vitro blood-brain barrier model from the luminal side to abluminal side, and the brain edema induced by the glioma cells may not necessarily be the result of hyperpermeability of the blood-brain barrier to macromolecules in the plasma. The decreased expression level of AQP4 induced by glioma cells may be a molecular mechanism for neoplastic brain edema in patients with glioma.


Subject(s)
Aquaporins/genetics , Astrocytes/metabolism , Brain Edema/etiology , Glioma/metabolism , Animals , Aquaporin 4 , Blood-Brain Barrier , Body Water/metabolism , Rats , Rats, Sprague-Dawley
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