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1.
PLoS Negl Trop Dis ; 15(7): e0009530, 2021 07.
Article in English | MEDLINE | ID: mdl-34310607

ABSTRACT

BACKGROUND: Dipeptidyl peptidase III (DPPIII) member of M49 peptidase family is a zinc-dependent metallopeptidase that cleaves dipeptides sequentially from the N-terminus of its substrates. In Leishmania, DPPIII, was reported with other peptidases to play a significant role in parasites' growth and survival. In a previous study, we used a coding sequence annotated as DPPIII to develop and evaluate a PCR assay that is specific to dermotropic Old World (OW) Leishmania species. Thus, our objective was to further assess use of this gene for Leishmania species identification and for phylogeny, and thus for diagnostic and molecular epidemiology studies of Old World Leishmania species. METHODOLOGY: Orthologous DDPIII genes were searched in all Leishmania genomes and aligned to design PCR primers and identify relevant restriction enzymes. A PCR assays was developed and seventy-two Leishmania fragment sequences were analyzed using MEGA X genetics software to infer evolution and phylogenetic relationships of studied species and strains. A PCR-RFLP scheme was also designed and tested on 58 OW Leishmania strains belonging to 8 Leishmania species and evaluated on 75 human clinical skin samples. FINDINGS: Sequence analysis showed 478 variable sites (302 being parsimony informative). Test of natural selection (dN-dS) (-0.164, SE = 0.013) inferred a negative selection, characteristic of essential genes, corroborating the DPPIII importance for parasite survival. Inter- and intra-specific genetic diversity was used to develop universal amplification of a 662bp fragment. Sequence analyses and phylogenies confirmed occurrence of 6 clusters congruent to L. major, L. tropica, L. aethiopica, L. arabica, L. turanica, L. tarentolae species, and one to the L. infantum and L. donovani species complex. A PCR-RFLP algorithm for Leishmania species identification was designed using double digestions with HaeIII and KpnI and with SacI and PvuII endonucleases. Overall, this PCR-RFLP yielded distinct profiles for each of the species L. major, L. tropica, L. aethiopica, L. arabica and L. turanica and the L. (Sauroleishmania) L. tarentolae. The species L. donovani, and L. infantum shared the same profile except for strains of Indian origin. When tested on clinical samples, the DPPIII PCR showed sensitivities of 82.22% when compared to direct examination and was able to identify 84.78% of the positive samples. CONCLUSION: The study demonstrates that DPPIII gene is suitable to detect and identify Leishmania species and to complement other molecular methods for leishmaniases diagnosis and epidemiology. Thus, it can contribute to evidence-based disease control and surveillance.


Subject(s)
Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/genetics , Leishmania/enzymology , Leishmaniasis, Cutaneous/parasitology , Protozoan Proteins/genetics , DNA Primers/genetics , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Genetic Markers , Humans , Leishmania/classification , Leishmania/genetics , Leishmania/isolation & purification , Leishmaniasis, Cutaneous/epidemiology , Phylogeny , Polymerase Chain Reaction , Protozoan Proteins/metabolism
2.
Saudi J Kidney Dis Transpl ; 28(6): 1440-1442, 2017.
Article in English | MEDLINE | ID: mdl-29265063

ABSTRACT

Fungal peritonitis is a serious complication of peritoneal dialysis (PD) leading to loss of ultrafiltration and discontinuation of PD treatment. The most frequently isolated fungi are Candida albicans and, filamentous fungi such Alternaria alternata species are found only rarely. We report the case of a 75-year-old woman who developed peritonitis due to this black fungus.


Subject(s)
Alternariosis/microbiology , Kidney Failure, Chronic/therapy , Peritoneal Dialysis, Continuous Ambulatory/adverse effects , Peritonitis/microbiology , Aged , Alternariosis/diagnosis , Alternariosis/drug therapy , Antifungal Agents/therapeutic use , Female , Humans , Kidney Failure, Chronic/diagnosis , Peritonitis/diagnosis , Peritonitis/drug therapy , Recurrence , Treatment Outcome
3.
Vector Borne Zoonotic Dis ; 17(6): 416-424, 2017 06.
Article in English | MEDLINE | ID: mdl-28301305

ABSTRACT

BACKGROUND: In Algeria, visceral leishmaniasis (VL) is due to Leishmania (L.) infantum, while three cutaneous forms (CL) are caused by Leishmania major, Leishmania tropica and Leishmania infantum. In this study, the use of Giemsa-stained slides was evaluated with two PCR techniques, in Eastern Algeria. MATERIALS AND METHODS: A total of 136 samples corresponding to 100 CL smears (skin scrapings) and 36 VL slides (bone marrow aspirates) collected from 2008 to 2014 were tested. Upon DNA extraction, two PCRs were used to amplify the ribosomal Internal Transcribed Spacer 1 (ITS1) and mini-exon genes. Amplified products were digested (PCR-RFLP) and profiles analyzed for Leishmania species identification. A statistical analysis was also performed. RESULTS: ITS1-PCR was found significantly more sensitive than mini-exon-PCR (77.95% positives vs. 67.65%; p = 0.001). Comparison of PCR positivity showed statistically significant differences between old and recently prepared slides suggesting a better use of recent slides in PCR analyses. For species identification, PCR-restriction fragment length polymorphism (RFLP) results of ITS1 and mini-exon were concordant. L. infantum was identified from VL cases and L. infantum, L. major, and L. tropica from CL ones. According to geographical origin, L. infantum was found in North-Eastern provinces, while L. major was distributed from the North to the Center-East of Algeria. Interestingly, two L. tropica samples were identified in Annaba, located far North-East Algeria. CONCLUSION: Distribution of leishmaniasis in Eastern parts of Algeria, besides finding of L. tropica in the far North, is in this study described for the first time using molecular tools, thus confirming the usefulness of slides for PCR identification of Leishmania parasites in retrospective epidemiological investigations.


Subject(s)
Leishmania/isolation & purification , Leishmaniasis, Cutaneous/parasitology , Leishmaniasis, Visceral/parasitology , Algeria/epidemiology , Animals , Azure Stains , Bone Marrow/parasitology , DNA, Ribosomal Spacer/genetics , Humans , Leishmania/classification , Leishmania/genetics , Leishmaniasis, Cutaneous/epidemiology , Leishmaniasis, Visceral/epidemiology , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Skin/parasitology , Zoonoses
4.
Korean J Parasitol ; 51(4): 485-8, 2013 Aug.
Article in English | MEDLINE | ID: mdl-24039295

ABSTRACT

The performance values of available techniques used in serodiagnosis of toxoplasmosis are satisfactory but they raise problems of equivocal and discordant results for very low IgG titers. Recently marketed, LDBio-Toxo II IgG Western blot (IB) showed an excellent correlation with the dye test. We estimated the proportion of equivocal and discordant results between the enzyme immunoassay Platelia Toxo IgG (EIA-IgG) and fluorescent antibody test (FAT) and assessed the usefulness of the IB as a confirmatory test. Out of 2,136 sera collected from pregnant women, 1,644 (77.0%) tested unequivocally positive and 407 (19.0%) were negative in both EIA-IgG and FAT. The remaining 85 (4%) sera showed equivocal or discordant results. Among them, 73 (85.9%) were positive and 12 (14.1%) were negative in IB. Forty-one (89.1%) equivocal sera in EIA-IgG and 46 (86.8%) equivocal sera in FAT were positive in IB. Reducing the cut-off values of both screening techniques improved significantly their sensitivity in detecting very low IgG titers at the expense of their specificity. In conclusion, equivocal results in routine-used techniques and their discordance in determination of the immune status in pregnancy women were not uncommon. IB test appeard to be highly useful in these situations as a confirmatory technique.


Subject(s)
Antibodies, Protozoan/analysis , Blotting, Western/methods , Fluorescent Antibody Technique/methods , Immunoenzyme Techniques/methods , Immunoglobulin M/analysis , Pregnancy Complications, Parasitic/diagnosis , Toxoplasmosis/diagnosis , Adult , Antibodies, Protozoan/blood , Female , Humans , Immunoglobulin M/blood , Pregnancy , Pregnancy Complications, Parasitic/blood , Toxoplasmosis/blood , Young Adult
5.
Tunis Med ; 81(12): 944-8, 2003 Dec.
Article in French | MEDLINE | ID: mdl-14986530

ABSTRACT

The hypothyroidism and coronary disease are tightly related. Our retrospective study, based upon the data from ten patients with hypothyroidism and coronary disease, aimed to assess the diagnosis, the prognosis and the therapeutic measures in these patients. Our population aged in average 60 years and was almost composed with women. Acute Coronary syndrome was a circumstance to discover hypothyroidism three patients. Bi and tritruncular stenosis were found in seven of the patients. The mean number of coronary lesion by patient is 2, 1. Myocardial reperfusion was proposed in seven of the patients. The three remainders were treated medically. Among the six operated patients, three were insufficiently prepared by the opotherapy. One of these patients died in preoperative period. The only patient who underwent angioplasty presented an uneventful period. At short and long term follow-up the evolution of all survivors patients was satisfactory on the both coronary and thyroidal sides. During the course of hypothyroidism coronary lesions are more extended, complex and severe. The management of such patients is difficult because of destabilisation of affection by the treatment of the other one. Preventive measures seams to warrant the best result.


Subject(s)
Heart Diseases/etiology , Hypothyroidism/complications , Aged , Female , Heart Diseases/pathology , Humans , Male , Middle Aged , Myocardial Reperfusion , Prognosis , Retrospective Studies
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