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1.
BMC Infect Dis ; 23(1): 863, 2023 Dec 07.
Article in English | MEDLINE | ID: mdl-38062360

ABSTRACT

BACKGROUND: Luteibacter jiangsuensis is a gram-negative aerobic bacillus that was first isolated from soil samples at a pesticide factory in China and reported in 2011. Here, we describe the first case of L. jiangsuensis infection in human. CASE PRESENTATION: A 59-year-old Japanese woman undergoing treatment for Crohn's disease was admitted to our hospital with fever. Clinical examination indicated catheter-related bloodstream infection. The catheter was removed and meropenem was initiated. Morphologically identical glucose non-fermentative gram-negative bacilli were detected from two sets of aerobic blood culture and catheter-tip cultures. MALDI-TOF mass spectrometry failed to identify the bacterium, which was later identified as L. jiangsuensis by 16 S rRNA gene sequencing. Antimicrobial susceptibility test revealed that the isolate was resistant to carbapenem, therefore meropenem was switched to intravenous levofloxacin (500 mg/day). After 14 days of treatment with levofloxacin, the patient was discharged. CONCLUSIONS: This is the first case of L. jiangsuensis infection in human. The strain was identified by 16 S rRNA gene sequence analysis.


Subject(s)
Bacteremia , Sepsis , Female , Humans , Middle Aged , Levofloxacin/therapeutic use , Meropenem/therapeutic use , Sepsis/drug therapy , Carbapenems/therapeutic use , Gram-Negative Bacteria , Bacteremia/diagnosis , Bacteremia/drug therapy , Bacteremia/microbiology , Anti-Bacterial Agents/therapeutic use
2.
J Microbiol Methods ; 155: 42-48, 2018 12.
Article in English | MEDLINE | ID: mdl-30423364

ABSTRACT

Although isolation and identification of bacteria in a clinical specimen constitute essential steps for the diagnosis of bacterial infection, positive results of the bacterial culture are not always attained, despite observing the bacteria by Gram staining. As bacteria phagocytosed by the leukocytes are considered as the causative agents of infectious diseases, this study aims to introduce a new approach for the collection of only bacteria phagocytosed by the neutrophils in an animal model using laser capture microdissection (LCM) followed by the DNA identification using polymerase chain reaction (PCR). We inoculated representative bacteria (Escherichia coli and Staphylococcus aureus) into the abdominal cavities of specific pathogen-free C57BL/6 J mice. After 6 h inoculation, we collected the fluid samples from the peritoneal cavities of mice and demonstrated peritonitis by the increase of neutrophils. Then, we smeared the neutrophils on the membrane slides and collected single-cell phagocytosing bacteria by LCM. The supernatant of the cell lysate was supplied for the PCR reaction to amplify the 16S rRNA gene, and we validated the DNA sequences specific for the inoculated bacteria. In addition, PCR using specific primers for E. coli and S. aureus identified each species of bacteria. Hence, this study suggests that the combination of LCM and PCR could be a novel approach to determine bacteria in infectious diseases. Nevertheless, further investigation is warranted to test various additional bacterial taxa to demonstrate the general applicability of this method to clinical samples.


Subject(s)
Bacterial Infections/diagnosis , Genes, Microbial/genetics , Laser Capture Microdissection/methods , Leukocytes/microbiology , Polymerase Chain Reaction/methods , RNA, Ribosomal, 16S/isolation & purification , Abdominal Cavity/microbiology , Animals , Bacteria/genetics , Bacteria/isolation & purification , Bacterial Infections/microbiology , Base Sequence , DNA Primers/genetics , DNA, Bacterial/isolation & purification , Escherichia coli/genetics , Escherichia coli/pathogenicity , Female , Mice , Mice, Inbred C57BL , Models, Animal , Neutrophils/microbiology , Phagocytosis , RNA, Ribosomal, 16S/genetics , Species Specificity , Staphylococcus aureus/genetics , Staphylococcus aureus/pathogenicity
3.
J Microbiol Methods ; 144: 22-28, 2018 01.
Article in English | MEDLINE | ID: mdl-29111399

ABSTRACT

Vibrio furnissii and V. fluvialis are closely related, the discrimination of which by conventional biochemical assay remains a challenge. Investigation of the sequence of the 16S rRNA genes in a clinical isolate of V. furnissii by visual inspection of a sequencing electropherogram revealed two sites of single-nucleotide polymorphisms (SNPs; positions 460 A/G and 1261 A/G) in these genes. A test of 12 strains each of V. fluvialis and V. furnissii revealed these SNPs to be common in V. furnissii but not in V. fluvialis. Divergence of SNP frequency was observed among the strains of V. furnissii tested. Because the SNPs described in V. furnissii produce a difference in the target sequence of restriction enzymes, a combination of polymerase chain reaction (PCR) of the 16S rRNA genes using conventional primers and restriction fragment length polymorphism analysis using Eco RV and Eae I was shown to discriminate between V. fluvialis and V. furnissii. This method is simple and alleviates the need for expensive equipment or primer sets specific to these bacteria. Therefore, we believe that this method can be useful, alongside specific PCR and mass spectrometry, when there is a need to discriminate between V. fluvialis and V. furnissii.


Subject(s)
Bacterial Typing Techniques/methods , Polymorphism, Single Nucleotide/genetics , RNA, Ribosomal, 16S/genetics , Vibrio/classification , Vibrio/genetics , Vibrio/isolation & purification , Base Sequence , Genes, Bacterial/genetics , Mass Spectrometry/methods , Molecular Diagnostic Techniques/methods , Polymerase Chain Reaction/methods , Sequence Analysis, DNA , Species Specificity , Water Microbiology
4.
Hum Cell ; 30(2): 117-123, 2017 Apr.
Article in English | MEDLINE | ID: mdl-28070874

ABSTRACT

In a previous study, we reported that an identical defective provirus had integrated into multiple sites of the genome of a representative human T-lymphotropic virus type 1 (HTLV-1) cell line, MT-2. A possible explanation for this may be the repeated infection of this defective provirus to a cell. Therefore, we attempted to determine whether a defective provirus could transmit during the co-culture of HTLV-1 uninfected human T-cell line, Jurkat, with MT-2 cells treated with mitomycin C. As a result, we established not only a cell line with the integration of one complete provirus, but also a cell line with the integration of one defective provirus. The rearrangement of the T-cell receptor -γ gene of these cell lines showed them to be derived from Jurkat cells. Both HTLV-1 Tax/Rex and HBZ RNA were detected in the cell line, which harbors a complete provirus. On the other hand, HBZ RNA and transcriptional product specific for the defective provirus were detected in the cell line, which harbors a defective HTLV-1 provirus only. These results suggested that a defective HTLV-1 provirus with large depletion of internal sequence could transmit to other cells. Moreover, the defective provirus can be transcriptionally active. This suggested the possibility that the defective HTLV-1 provirus found in the lymphocytes of HTLV-1 carriers and patients with adult T-cell leukemia may transmit to other T-cells in vivo. The results also suggested that defective provirus in HTLV-1 carriers could be functional and may play a role in leukemogenesis.


Subject(s)
Human T-lymphotropic virus 1/genetics , Human T-lymphotropic virus 1/physiology , Jurkat Cells/virology , Virus Integration , Base Sequence , Cell Line , Gene Rearrangement, T-Lymphocyte , Human T-lymphotropic virus 1/pathogenicity , Humans , Polymerase Chain Reaction/methods , Receptors, Antigen, T-Cell, gamma-delta/genetics
5.
Hepatogastroenterology ; 54(76): 1049-52, 2007 Jun.
Article in English | MEDLINE | ID: mdl-17629036

ABSTRACT

BACKGROUND/AIMS: Epidermal growth factor (EGF) is involved in cancer development and proliferation. We measured preoperative serum EGF, and serologically investigated the clinical significance of EGF expression in gastric cancer. We also performed immunohistological staining at the same time, and investigated its relationship with serum EGF. METHODOLOGY: There were 79 patients who underwent surgery for gastric cancer. For the measurement, one-step sandwich EIA was performed. Of 79 cases of gastric cancer in which the serum EGF level was measured, EGF immunostaining was performed in 50 cases. RESULTS: In Serology, the EGF level was 345.6 +/- 260.6 pg/mL in m-sm cases, and 212.2 +/- 170.4 pg/mL in mp-si cases (p < 0.05). The EGF level was 294.4 +/- 236.0 pg/mL in ly0 cases, and 194.2 +/- 142.5 pg/mL in ly1-3 cases (p < 0.05). The EGF level was 323.5 +/- 233.4 pg/mL in cases staged IA-IB, and 202.8 +/- 176.8 pg/mL in cases staged II-IV (p < 0.05). In immunohistology the EGF positivity rate was 36.4% in the differentiated types, and 67.9% in the poorly differentiated types (p < 0.05). The EGF positivity rate was 25.0% in m-sm cases, and 63.1% in mp-si cases (p < 0.05). CONCLUSIONS: The above findings suggest that EGF uptake by cancer cells increases when cancer cells are poorly differentiated, and that invasion in the surrounding tissue is severe.


Subject(s)
Carcinoma/diagnosis , Epidermal Growth Factor/blood , Stomach Neoplasms/diagnosis , Carcinoma/pathology , Carcinoma/surgery , Epidermal Growth Factor/analysis , Female , Humans , Immunohistochemistry , Male , Stomach Neoplasms/pathology , Stomach Neoplasms/surgery
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