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1.
Sci Rep ; 13(1): 320, 2023 01 06.
Article in English | MEDLINE | ID: mdl-36609500

ABSTRACT

State-of-the-art chemistry-climate models (CCMs) have indicated that a future decrease in ozone-depleting substances (ODSs) combined with an increase in greenhouse gases (GHGs) would increase the column ozone amount in most regions except the tropics and Antarctic. However, large Arctic ozone losses have occurred at a frequency of approximately once per decade since the 1990s (1997, 2011 and 2020), despite the ODS concentration peaking in the mid-1990s. To understand this, CCMs were used to conduct 24 experiments with ODS and GHG concentrations set based on predicted values for future years; each experiment consisted of 500-member ensembles. The 50 ensemble members with the lowest column ozone in the mid- and high latitudes of the Northern Hemisphere showed a clear ODS dependence associated with low temperatures and a strong westerly zonal mean zonal wind. Even with high GHG concentrations, several ensemble members showed extremely low spring column ozone in the Arctic when ODS concentration remained above the 1980-1985 level. Hence, ODS concentrations should be reduced to avoid large ozone losses in the presence of a stable Arctic polar vortex. The average of the lowest 50 members indicates that GHG increase towards the end of the twenty-first century will not cause worse Arctic ozone depletion.


Subject(s)
Greenhouse Gases , Ozone , Ozone/analysis , Cold Temperature , Seasons , Antarctic Regions
2.
Geophys Res Lett ; 45(18): 9919-9933, 2018 Sep 28.
Article in English | MEDLINE | ID: mdl-32742043

ABSTRACT

Simulated stratospheric temperatures over the period 1979-2016 in models from the Chemistry-Climate Model Initiative (CCMI) are compared with recently updated and extended satellite observations. The multi-model mean global temperature trends over 1979- 2005 are -0.88 ± 0.23, -0.70 ± 0.16, and -0.50 ± 0.12 K decade-1 for the Stratospheric Sounding Unit (SSU) channels 3 (~40-50 km), 2 (~35-45 km), and 1 (~25-35 km), respectively. These are within the uncertainty bounds of the observed temperature trends from two reprocessed satellite datasets. In the lower stratosphere, the multi-model mean trend in global temperature for the Microwave Sounding Unit channel 4 (~13-22 km) is -0.25 ± 0.12 K decade-1 over 1979-2005, consistent with estimates from three versions of this satellite record. The simulated stratospheric temperature trends in CCMI models over 1979-2005 agree with the previous generation of chemistry-climate models. The models and an extended satellite dataset of SSU with the Advanced Microwave Sounding Unit-A show weaker global stratospheric cooling over 1998-2016 compared to the period of intensive ozone depletion (1979-1997). This is due to the reduction in ozone-induced cooling from the slow-down of ozone trends and the onset of ozone recovery since the late 1990s. In summary, the results show much better consistency between simulated and satellite observed stratospheric temperature trends than was reported by Thompson et al. (2012) for the previous versions of the SSU record and chemistry-climate models. The improved agreement mainly comes from updates to the satellite records; the range of simulated trends is comparable to the previous generation of models.

3.
Atmos Chem Phys ; 18(21): 16155-16172, 2018 Nov.
Article in English | MEDLINE | ID: mdl-32742283

ABSTRACT

Previous multi-model intercomparisons have shown that chemistry-climate models exhibit significant biases in tropospheric ozone compared with observations. We investigate annual-mean tropospheric column ozone in 15 models participating in the SPARC/IGAC (Stratosphere-troposphere Processes and their Role in Climate/International Global Atmospheric Chemistry) Chemistry-Climate Model Initiative (CCMI). These models exhibit a positive bias, on average, of up to 40-50% in the Northern Hemisphere compared with observations derived from the Ozone Monitoring Instrument and Microwave Limb Sounder (OMI/MLS), and a negative bias of up to ~30% in the Southern Hemisphere. SOCOLv3.0 (version 3 of the Solar-Climate Ozone Links CCM), which participated in CCMI, simulates global-mean tropospheric ozone columns of 40.2 DU - approximately 33% larger than the CCMI multi-model mean. Here we introduce an updated version of SOCOLv3.0, "SOCOLv3.1", which includes an improved treatment of ozone sink processes, and results in a reduction in the tropospheric column ozone bias of up to 8 DU, mostly due to the inclusion of N2O5 hydrolysis on tropospheric aerosols. As a result of these developments, tropospheric column ozone amounts simulated by SOCOLv3.1 are comparable with several other CCMI models. We apply Gaussian process emulation and sensitivity analysis to understand the remaining ozone bias in SOCOLv3.1. This shows that ozone precursors (nitrogen oxides (NOx), carbon monoxide, methane and other volatile organic compounds) are responsible for more than 90% of the variance in tropospheric ozone. However, it may not be the emissions inventories themselves that result in the bias, but how the emissions are handled in SOCOLv3.1, and we discuss this in the wider context of the other CCMI models. Given that the emissions data set to be used for phase 6 of the Coupled Model Intercomparison Project includes approximately 20% more NOx than the data set used for CCMI, further work is urgently needed to address the challenges of simulating sub-grid processes of importance to tropospheric ozone in the current generation of chemistry-climate models.

4.
Atmos Chem Phys ; 18(15): 11277-11287, 2018 Aug.
Article in English | MEDLINE | ID: mdl-32742282

ABSTRACT

Major stratospheric sudden warmings (SSWs) are the largest instance of wintertime variability in the Arctic stratosphere. Due to their relevance for the troposphere-stratosphere system, several previous studies have focused on their potential response to anthropogenic forcings. However, a wide range of results have been reported, from a future increase in the frequency of SSWs to a decrease. Several factors might explain these contradictory results, notably the use of different metrics for the identification of SSWs, and the impact of large climatological biases in single-model studies. Here we revisit the question of future SSWs changes, using an identical set of metrics applied consistently across 12 different models participating in the Chemistry Climate Model Initiative. From analyzing future integrations we find no statistically significant change in the frequency of SSWs over the 21st century, irrespective of the metric used for the identification of SSWs. Changes in other SSWs characteristics, such as their duration and the tropospheric forcing, are also assessed: again, we find no evidence of future changes over the 21st century.

5.
Biosci Biotechnol Biochem ; 68(10): 2193-6, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15502369

ABSTRACT

A recombinant chitinase was purified from the cell extract of Escherichia coli JM109 transformed by plasmid pUC19 carrying the gene encoding family 19 chitinase of Streptomyces sp. J-13-3 by column chromatography on DEAE-Sepharose, CM-Sepharose, and Bio-Gel P-100. The final preparation was homogenous in polyacrylamide gel electrophoresis. The molecular weight of the purified enzyme was estimated to be 32,000. The recombinant chitinase hydrolyzed the trimer to hexamer of N-acetylglucosamine and had the identical N-terminal amino acid sequence of the mature protein, indicating removal of the signal sequence by E. coli signal peptidase. The fungal growth in well (200 microl of medium) of microplate by measurement of absorbance at 595 nm indicated that the chitinase (10 microg) completely and half inhibited growth of Trichoderma reesei and Aspergillus niger respectively.


Subject(s)
Aspergillus niger/drug effects , Cell Proliferation/drug effects , Chitinases/isolation & purification , Recombinant Proteins/isolation & purification , Trichoderma/drug effects , Acetylglucosamine/metabolism , Aspergillus niger/growth & development , Chitinases/genetics , Cloning, Molecular , Electrophoresis, Polyacrylamide Gel , Escherichia coli/enzymology , Escherichia coli/genetics , Membrane Proteins/metabolism , Protein Sorting Signals/physiology , Recombinant Proteins/genetics , Serine Endopeptidases/metabolism , Streptomyces/genetics , Trichoderma/growth & development
6.
Biosci Biotechnol Biochem ; 68(2): 341-51, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14981297

ABSTRACT

The gene encoding chitinase from Streptomyces sp. (strain J-13-3) was cloned and its nucleotide structure was analyzed. The chitinase consisted of 298 amino acids containing a signal peptides (29 amino acids) and a mature protein (269 amino acids), and had calculated molecular mass of 31,081 Da. The calculated molecular mass (28,229 Da) of the mature protein was almost same as that of the native chitinase determined by matrix-assisted laser desorption ionization time-of-flight mass spectrometer. Comparison of the encoded amino acid sequences with those of other chitinases showed that J-13-3 chitinase was a member of the glycosyl-hydrolase family 19 chitinases and the mature protein had a chitin binding domain (65 amino acids) containing AKWWTQ motif and a catalytic domain (204 amino acids). The J-13-3 strain had a single chitinase gene. The chitinase (298 amino acids) with C-terminal His tag was overexpressed in Escherichia coli BL21(DE3) cells. The recombinant chitinase purified from the cell extract had identical N-terminal amino acid sequence of the mature protein in spite of confirmation of the nucleotide sequence, suggesting that the signal peptide sequence is successfully cut off at the predicted site by signal peptidase from E. coli and will be a useful genetic tool in protein engineering for production of soluble recombinant protein. The optimum temperature and pH ranges of the purified chitinase were at 35-40 degrees C and 5.5-6.0, respectively. The purified chitinase hydrolyzed colloidal chitin and trimer to hexamer of N-acetylglucosamine and also inhibited the hyphal extension of Tricoderma reesei.


Subject(s)
Chitinases/biosynthesis , Chitinases/genetics , Gene Expression Regulation, Bacterial/genetics , Gene Expression Regulation, Enzymologic/genetics , Streptomyces/enzymology , Streptomyces/genetics , Amino Acid Sequence , Base Sequence , Blotting, Southern , Chitinases/chemistry , Chromatography, Thin Layer , Cloning, Molecular , DNA Primers , DNA, Bacterial/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Library , Hydrolysis , Hyphae/drug effects , Hyphae/growth & development , Molecular Sequence Data , Molecular Weight , Peptides/chemistry , Plasmids/genetics , Promoter Regions, Genetic/genetics , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Reverse Transcriptase Polymerase Chain Reaction , Trichoderma/drug effects
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