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1.
Appl Microbiol Biotechnol ; 107(5-6): 1887-1902, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36795140

ABSTRACT

Vibrio alginolyticus is an important foodborne pathogen that can infect both humans and marine animals and cause massive economic losses in aquaculture. Small noncoding RNAs (sRNAs) are emerging posttranscriptional regulators that affect bacterial physiology and pathological processes. In the present work, a new cell density-dependent sRNA, Qrr4, was characterized in V. alginolyticus based on a previously reported RNA-seq analysis and bioinformatics approach. The effects of Qrr4 actions on the physiology, virulence, and metabolism of V. alginolyticus were comprehensively investigated based on molecular biology and metabolomics approaches. The results showed that qrr4 deletion markedly inhibited growth, motility and extracellular protease activities. Additionally, nontargeted metabolism and lipidomics analyses revealed that qrr4 deletion induced significant disturbance of multiple metabolic pathways. The key metabolic remodelling that occurred in response to qrr4 deletion was found to involve phospholipid, nucleotide, carbohydrate and amino acid metabolic pathways, providing novel clues about a potential mechanism via which mutation of qrr4 could interfere with cellular energy homeostasis, modulate membrane phospholipid composition and inhibit nucleic acid and protein syntheses to regulate the motility, growth and virulence characteristics of V. alginolyticus. Overall, this study provides a comprehensive understanding of the regulatory roles of the new cell density-dependent sRNA Qrr4 in V. alginolyticus. KEY POINTS: • A novel cell density-dependent sRNA, Qrr4, was cloned in V. alginolyticus. •Qrr4 regulated growth and virulence factors of V. alginolyticus. • Phospholipid, nucleotide and energy metabolisms were modulated obviously by Qrr4.


Subject(s)
RNA, Small Untranslated , Vibrio alginolyticus , Animals , Humans , Vibrio alginolyticus/genetics , Virulence/genetics , Virulence Factors/metabolism , Nucleotides/metabolism , RNA, Small Untranslated/genetics , Bacterial Proteins/genetics
2.
Int Immunopharmacol ; 113(Pt A): 109274, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36252472

ABSTRACT

Doxorubicin (DOX), a broad-spectrum anti-tumor drug, has severe cardiotoxic side effects that limit its clinical application. Perillaldehyde (PAE) is the main component of volatile oil extracted from the stems and leaves of Herbaceous plant-perilla, which demonstrates antioxidant, anti-inflammatory, hypolipidemic, and other health functions. The present study aimed to explore the protective effect of perillaldehyde on DOX-induced cardiotoxicity in rats and to confirm its possible mechanism. The results showed that PAE could significantly improve cardiac function, alleviate myocardial fibrosis, and attenuate oxidative stress and inflammatory responses in DOX-induced cardiotoxicity in rats. Mechanistically, PAE could DOX-induced cardiotoxicity, which is related to its regulation of the PI3K/Akt signaling pathway and inhibition of NHE1 phosphorylation. Therefore, the finding demonstrates that perillaldehyde may be a promising cardioprotective agent for the prevention and treatment of cardiotoxicity caused by DOX.


Subject(s)
Cardiotoxicity , Proto-Oncogene Proteins c-akt , Rats , Animals , Cardiotoxicity/drug therapy , Proto-Oncogene Proteins c-akt/metabolism , Phosphatidylinositol 3-Kinases/metabolism , Phosphorylation , Doxorubicin/adverse effects , Oxidative Stress , Apoptosis , Myocytes, Cardiac/metabolism
3.
Front Vet Sci ; 9: 953380, 2022.
Article in English | MEDLINE | ID: mdl-35928116

ABSTRACT

Neosporosis is a worldwide infectious disease caused by intracellular parasite Neospora caninum that is a major pathogen of abortion in cattle and neurological disorders in other hosts. However, limited data are available on animals exposed to N. caninum in the Qinghai-Tibetan Plateau Area (QTPA), and little is known about whether animals in the plateau area play an important role in the epidemiology of N. caninum. Therefore, indirect ELISAs based on a combination of NcSAG1 and NcGRA7 antigens were developed to examine both N. caninum-specific IgG and IgM antibodies in Tibetan sheep, yak, cow, pig, cattle, horse, chicken, camel, and donkey from the QTPA in this study. The results showed that all current species present- IgG and IgM-positive animals, and that the overall seroprevalence of N. caninum were 18.6 (703/3,782) and 48.1% (1,820/3,782) for the IgG and IgM antibodies, respectively. Further analysis found significant differences from different altitudes in IgG in Tibetan sheep and IgM in the yak. Hence, the present serological results indicate that the tested animal populations in the QTPA are suffering from N. caninum infections or have become carriers of N. caninum antibodies. To the best of our knowledge, this is the first report on current N. caninum-infected animals in the QTPA, the first epidemiology of neosporosis in cow and camel in China, and the first record of N. caninum IgM antibodies in all the surveyed animals in China. This study provides the latest valuable data on the epidemiology of neosporosis in China and in plateau areas of the world.

4.
Animals (Basel) ; 12(11)2022 May 28.
Article in English | MEDLINE | ID: mdl-35681854

ABSTRACT

Toxoplasma gondii and Neospora caninum belong to the Apicomplexan protozoa which is an obligate intracellular parasite, causing toxoplasmosis and neosporosis throughout the world. Cats and dogs are the definitive hosts of these two parasites. However, information on the epidemiology of toxoplasmosis and neosporosis in stray cats and dogs in the Qinghai-Tibetan Plateau Area (QTPA) is limited, and little is known about the diversity of the diseases. Therefore, the aim of this study was to perform indirect ELISA tests based on recombinant TgSAG1, TgGRA1, NcSAG1 and NcGRA7 proteins to establish a detailed record of the seroprevalence of T. gondii and N. caninum-specific IgG and IgM antibodies in serum samples and to develop qPCR amplification based on TgB1 and NcNc5 genes to conduct molecular epidemiology in feces from stray cats and dogs in the QTPA. In the current study, a total of 128 cat serum samples were analyzed through serological tests in which 53 (41.4%) and 57 (44.5%) samples were found positive for T. gondii specific-IgG and IgM antibodies, and 2 (1.6%) and 74 (57.8%) samples were confirmed positive for N. caninum specific-IgG and IgM antibodies, respectively. Out of 224 stray dog sera, 59.8% and 58.9% were recorded as positive against anti-Toxoplasma IgG and IgM antibodies, 17.9% and 64.7% were detected positive against Neospora IgG and IgM. On the other hand, 1 of 18 cat fecal samples was successfully amplified within the Ct value of 10 to 30 while no cat was positive for neosporosis. Moreover, a higher prevalence of toxoplasmosis in stray dogs (14.5%, 16/110) than of neosporosis (5.5%, 6/110) with different parasite numbers were found. Further analysis showed that no significant sex differences were found nor between the overall infection rates of T. gondii and N. caninum in this study. This study suggests that stray cats and dogs play key roles in the transmission and prevalence of T. gondii and N. caninum in the plateau area.

5.
Parasit Vectors ; 14(1): 613, 2021 Dec 23.
Article in English | MEDLINE | ID: mdl-34949216

ABSTRACT

BACKGROUND: Anaplasma, Babesia and Theileria are tick-borne pathogens (TBPs) that affect livestock worldwide. However, information on these pathogens in yaks (Bos grunniens) and Tibetan sheep (Ovis aries) on the Qinghai-Tibet Plateau (QTP), China, is limited. In this study, Anaplasma spp., Babesia spp. and Theileria spp. infections were assessed in yaks and Tibetan sheep from Qinghai Province. METHODS: A total of 734 blood samples were collected from 425 yaks and 309 Tibetan sheep at nine sampling sites. Standard or nested polymerase chain reaction was employed to screen all the blood samples using species- or genus-specific primers. RESULTS: The results showed that 14.1% (60/425) of yaks and 79.9% (247/309) of Tibetan sheep were infected with at least one pathogen. Anaplasma ovis, Anaplasma bovis, Anaplasma capra, Anaplasma phagocytophilum, Babesia bovis and Theileria spp. were detected in this study, with total infection rates for all the assessed animals of 22.1% (162/734), 16.3% (120/734), 23.6% (173/734), 8.2% (60/734), 2.7% (20/734) and 19.3% (142/734), respectively. For yaks, the infection rate of A. bovis was 6.4% (27/425), that of B. bovis was 4.7% (20/425) and that of Theileria spp. was 3.3% (14/425). Moreover, 52.4% (162/309) of the Tibetan sheep samples were infected with A. ovis, 30.1% (93/309) with A. bovis, 56.0% (173/309) with A. capra, 19.4% (60/309) with A. phagocytophilum and 41.4% (128/309) with Theileria spp. CONCLUSIONS: This study revealed the prevalence of Anaplasma spp., Babesia spp. and Theileria spp. in yaks and Tibetan sheep in Qinghai Province, China, and provides new data for a better understanding of the epidemiology of TBPs in these animals in this area of the QTP, China.


Subject(s)
Anaplasmosis/microbiology , Babesiosis/parasitology , Cattle Diseases/microbiology , Sheep Diseases/microbiology , Theileriasis/parasitology , Anaplasma/isolation & purification , Anaplasmosis/epidemiology , Animals , Babesia/isolation & purification , Babesiosis/epidemiology , Cattle , Cattle Diseases/epidemiology , Cattle Diseases/parasitology , China/epidemiology , Sheep , Sheep Diseases/epidemiology , Sheep Diseases/parasitology , Theileria/isolation & purification , Theileriasis/epidemiology
6.
Acta Biochim Biophys Sin (Shanghai) ; 53(12): 1691-1701, 2021 Dec 08.
Article in English | MEDLINE | ID: mdl-34718372

ABSTRACT

We have previously reported that the long-term exposure of Isocarbophos, a kind of organophosphorus compounds, induces vascular dementia (VD) in rats. Studies have also shown that organophosphorus compounds have adverse effects on offsprings. Vitamin B6 is a coenzyme mainly involved in the regulation of metabolism and has been demonstrated to ameliorate VD. Sphingosine-1-phosphate (S1P), a biologically active lipid, plays a vital role in the cardiovascular system. However, whether S1P is involved in the therapeutic effects of Vitamin B6 on posterior cerebral artery injury has yet to be further answered. In the present study, we aimed to explore the potential influence of Vitamin B6 on Isocarbophos-induced posterior cerebral artery injury in offspring rats and the role of the S1P receptor in this process. We found that Vitamin B6 significantly improves the vasoconstriction function of the posterior cerebral artery in rats induced by Isocarbophos by the blood gas analysis and endothelium-dependent relaxation function assay. We further demonstrated that Vitamin B6 alleviates the Isocarbophos-induced elevation of ICAM-1, VCAM-1, IL-1, and IL-6 by using the enzyme-linked immunosorbent assay kits. By performing immunofluorescence and the western blot assay, we revealed that Vitamin B6 prevents the down-regulation of S1P in posterior cerebral artery injury. It is worth noting that Fingolimod, the S1P inhibitor, significantly inhibits the Vitamin B6-induced up-regulation of S1P in posterior cerebral artery injury. Collectively, our data indicate that Vitamin B6 may be a novel drug for the treatment of posterior cerebral artery injury and that S1P may be a drug target for its treatment.


Subject(s)
Cerebral Arterial Diseases/prevention & control , Posterior Cerebral Artery/drug effects , Protective Agents/pharmacology , Sphingosine-1-Phosphate Receptors/metabolism , Vitamin B 6/pharmacology , Acid-Base Equilibrium/drug effects , Animals , Apoptosis/drug effects , Caspase 3/metabolism , Cerebral Arterial Diseases/pathology , Cytokines/metabolism , Disease Models, Animal , Female , Hypoxia/chemically induced , Hypoxia/prevention & control , Insecticides/toxicity , Lysophospholipids/metabolism , Malathion/analogs & derivatives , Malathion/toxicity , Male , Malondialdehyde/blood , Malondialdehyde/metabolism , Maternal Exposure/adverse effects , Nitric Oxide/blood , Nitric Oxide/metabolism , Paternal Exposure/adverse effects , Posterior Cerebral Artery/injuries , Posterior Cerebral Artery/pathology , Protective Agents/therapeutic use , Rats, Sprague-Dawley , Sphingosine/analogs & derivatives , Sphingosine/metabolism , Superoxide Dismutase/blood , Superoxide Dismutase/metabolism , Up-Regulation , Vasoconstriction/drug effects , Vitamin B 6/therapeutic use
7.
Rev. polis psique ; 11(2): 109-135, maio-ago. 2021. ilus
Article in Spanish | LILACS, Index Psychology - journals | ID: biblio-1352143

ABSTRACT

El objetivo del artículo es identificar las características de la homosexualidad tal y como es construida por la ciencia psicológica de América Latina, España y Portugal. Realizamos un Análisis de Contenido y un Análisis Argumentativo de 420 artículos científicos publicados en esas regiones. Los resultados muestran que la psicología de estas regiones ha construido a) una población y sexualidad patologizadas, vulnerables y victimizadas; b) una población masculina riesgosa y sexualizada, y una población femenina invisible; c) una población parcialmente incluida en los derechos y sociocultural y generalmente excluida; d) una población y sexualidad "discapacitadas" y dolorosas y; e) la dicotomía binaria del sexo/género. Con este trabajo problematizamos la homosexualidad constituida a través de las prácticas científicas, entendiendo que éstas son capaces de crear realidades. Como discusión, planteamos que los discursos científicos pueden pasar de discursos reivindicadores de las normativas sexuales a discursos de resistencia. (AU)


The objective of the article is to identify the characteristics of homosexuality constructed by the psychological science of Latin America, Spain and Portugal. We conducted a Content Analysis and an Argumentative Analysis of 420 scientific articles published in those regions. The results show that the psychology of these regions has built a) a pathologized, vulnerable and victimized population and sexuality; b) a risky and sexualized male population, and an invisible female population; c) a population partially included in the rights but sociocultural and generally excluded; d) a "disabled" and painful population and sexuality, and; e) the binary dichotomy of sex / gender. With this work we problematize the constituted homosexuality through scientific practices, understanding that they are capable of creating realities. As a discussion, we propose that scientific discourses can go from the discourses which define the sexual norms to the discourses of resistance. (AU)


O objetivo do artigo é identificar as caraterísticas da homossexualidade tal e como é construída pela ciência psicológica da América Latina, Espanha e Portugal. Realizamos uma Análise de Conteúdo e uma Análise Argumentativo de 420 artigos científicos publicados nessas regiões. Os resultados mostram que a psicologia destas regiões construiu a) uma população e sexualidade patologizadas, vulneráveis e victimizadas; b) uma população masculina riesgosa e sexualizada, e uma população feminina invisível; c) uma população parcialmente incluída nos direitos, e sociocultural e geralmente excluída; d) uma população e sexualidade "discapacitadas" e dolorosas e; e) a dicotomia binária do sexo/gênero. Com este trabalho problematizamos a homossexualidade constituída através das práticas científicas, entendendo que estas são capazes de criar realidades. Como discussão, propomos que os discursos científicos podem passar de discursos reivindicadores dos regulamentos sexuais a discursos de resistência. (AU)


Subject(s)
Psychology , Homosexuality, Male , Homosexuality, Female , Portugal , Spain , Latin America
8.
Diversitas perspectiv. psicol ; 17(1): 227-242, Jan.-June 2021. tab, graf
Article in Spanish | LILACS-Express | LILACS | ID: biblio-1375321

ABSTRACT

Resumen Para identificar el estudio y enfoque que la psicología de China realiza sobre la homosexualidad y el lesbianismo se realizó una revisión sistemática de la bibliografía publicada entre 2012-2016. Se realizó la búsqueda en seis bases de datos: BVS, Dialnet, PsycINFO (PsycNET), Scopus, Web of Science y CNKI (中国知网). Como resultado, se encontraron 240 artículos: 202 de la China continental, 30 de Hong Kong y 12 de Taiwan. Se analizaron los idiomas utilizados, cantidad de publicación en cada año, las áreas de psicología en que se publican y los temas de los artículos publicados se han organizado en doce categorías. A partir de los resultados, presentamos una discusión sobre la patologización construida de la población homosexual, la invisibilidad de la población homosexual femenina, la hegemonía de la lengua inglesa y el efecto de la censura de la publicación científica.


Abstract To identify the study and the approach Chinese psychology takes on homosexuality and lesbianism, a systematic review of the bibliography published between 2012 and 2016 was conducted. The search was made in six databases: BVS, Dialnet, PsycINFO (PsycNET), Scopus, Web of Science and CNKI (中国知网). As result, 240 articles were found: 202 from mainland China, 30 from Hong Kong, and 12 from Taiwan. We analyzed the languages used, amount of publication in each year, the areas of psychology in which they were published and the topics of the published articles have been organized into 12 categories. Based on the results, we present a discussion on the constructed pathologization of the homosexual population, the invisibility of the female homosexual population, the hegemony of the English language and the effect of censorship of scientific publication.

9.
Pathogens ; 10(4)2021 Apr 06.
Article in English | MEDLINE | ID: mdl-33917355

ABSTRACT

Toxoplasma gondii belongs to the Apicomplexan protozoa-an obligate intracellular parasite-causing toxoplasmosis that has a worldwide distribution and is very harmful to both human health and the livestock industry. However, the information on toxoplasmosis in the Qinghai-Tibetan Plateau Area (QTPA) and the seroprevalence of T. gondii in the food-borne animals in that area has been limited. Therefore, this study focused to T. gondii and toxoplasmosis to perform an indirect ELISA test based on recombinant TgSAG2 protein to establish a comprehensive record of the seroprevalence of T. gondii infections in a wide range of animals, including Tibetan sheep (Ovis aries), yaks (Bos grunniens), cows, chicken, pigs, and horses, in the QTPA. Overall, the seropositive rates of the specific-T. gondii IgG and IgM antibodies in all investigated animals were 44.1% (1179/2673) and 18.0% (469/2612), respectively. The 14.9% (389/2612) sera were determined to be both IgG and IgM positive samples, 30.2% (789/2673) were single-IgG seropositive, and a total of 80 in 2612 animals (3.0%) were single-IgM seropositive. Moreover, for the animal species, the pig was the most prevalent animal (90.2%, 304/337) for IgG positivity, followed by Tibetan sheep (50.7%, 460/907), chickens (45.8%, 229/500), yaks (21.1%, 140/663), cows (18.5%, 38/205) and horses (13.1%, 8/61), respectively. For the IgM antibody positivity, the pig was also the most prevalent animal (41.8%, 141/337), followed by Tibetan sheep (21.2%, 191/907), cows (15.1%, 31/205), chickens (12.4%, 62/500) and yaks (6.6%, 44/663), respectively. The significant differences in the prevalent distribution of T. gondii were found in the different altitudes. In conclusion, this study found the high seroprevalence for T. gondii infections among these animal species in the QTPA, and provides new data to facilitate further research for development of control measures against T. gondii infections in the surveyed locations.

10.
Front Vet Sci ; 8: 779387, 2021.
Article in English | MEDLINE | ID: mdl-35211533

ABSTRACT

The Qinghai-Tibet Plateau Area (QTPA) has a complex natural ecosystem, causing a greatly increased risk of spreading various tick-borne diseases including rickettsial infections, which are regarded as one of the oldest known vector-borne zoonoses. However, the information of one of its pathogen, spotted fever group Rickettsia (SFG Rickettsia), is limited in tick vectors and animals in this area. Therefore, this study focused on the investigation of SFG Rickettsia in tick vectors, yaks (Bos grunniens), and Tibetan sheep (Ovis aries) in the QTPA. A total of 1,000 samples were collected from nine sampling sites, including 425 of yaks, 309 of Tibetan sheep, 266 of ticks. By morphological examination, PCR, and sequencing, we confirmed the species of all collected ticks. All tick samples, all yak and Tibetan sheep blood samples were detected based on SFG Rickettsia ompA and sca4 gene. The results showed that all tick samples were identified to be Haemaphysalis qinghaiensis, and the positive rates of SFG Rickettsia were 5.9% (25/425), 0.3% (1/309), and 54.1% (144/266) in yaks, Tibetan sheep, and ticks, respectively. All positive samples were sequenced, and BLASTn analysis of the ompA gene sequences of SFG Rickettsia showed that all positive samples from animals and ticks had 99.04-100% identity with yak and horse isolates from Qinghai Province, China. BLASTn analysis of the sca4 gene sequences of SFG Rickettsia showed that all positive samples had 97.60-98.72% identity with tick isolates from Ukraine. In addition, the phylogenetic analysis showed that all the SFG Rickettsia ompA and sca4 sequences obtained from this study belong to the same clade as Rickettsia raoultii isolated from livestock and ticks from China and other countries. Molecularly, this study detected and characterized SFG Rickettsia both in the tick vectors and animals, suggesting that the relationship between SFG Rickettsia, tick species and animal hosts should be explored to understand their interrelationships, which provide a theoretical basis for preventing control of this pathogen.

11.
Scand J Clin Lab Invest ; 81(1): 39-45, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33300816

ABSTRACT

Salivary mRNA biomarkers and serum carcinoembryonic antigen (CEA) have been recognized as promising liquid biopsy methods for detection of multiple cancers. However, current tests normally use solitary type of biomarkers, and are limited by unsatisfactory sensitivity and specificity when applied to differentiate cancer patients from healthy controls. In this study, a combined approach of CEA and salivary mRNA biomarkers was evaluated for discriminatory performance of ovarian cancer patients from healthy controls. We designed our study with two phases: a discovery phase to find and evaluate multiple biomarkers, and an independent validation phase to confirm the applicability of the selected biomarkers. In the discovery phase, a total of 140 ovarian cancer patients and 140 healthy controls were recruited. The CEA level in blood as well as five mRNA biomarkers in saliva (i.e. AGPAT1, B2M, BASP1, IER3 and IL1ß) were measured, followed by developing a machine-learning model to differentiate ovarian cancer patients and healthy controls. We found a novel panel of biomarkers, which could differentiate ovarian cancer patients from healthy controls with high sensitivity (89.3%) and high specificity (82.9%). Next, we applied this panel of biomarkers in an independent validation study that consisted of 60 ovarian cancer patients and 60 healthy controls. The ovarian cancer patients were successfully differentiated from healthy controls in the validation phase, with sensitivity reaching 85.0% and specificity reaching 88.3%. To our best knowledge, it is the first time that a combined use of CEA and salivary mRNA biomarkers were applied for non-invasive detection of ovarian cancer.


Subject(s)
Carcinoembryonic Antigen/metabolism , Ovarian Neoplasms/diagnosis , Ovarian Neoplasms/genetics , RNA, Messenger/metabolism , Saliva/metabolism , Algorithms , Biomarkers, Tumor/metabolism , Databases as Topic , Female , Gene Expression Regulation, Neoplastic , Humans , Machine Learning , Middle Aged , RNA, Messenger/genetics , ROC Curve , Reproducibility of Results
12.
J Virol ; 94(10)2020 05 04.
Article in English | MEDLINE | ID: mdl-32132234

ABSTRACT

A novel lytic bacteriophage, ValSw3-3, which efficiently infects pathogenic strains of Vibrio alginolyticus, was isolated from sewage water and characterized by microbiological and in silico genomic analyses. Transmission electron microscopy indicated that ValSw3-3 has the morphology of siphoviruses. This phage can infect four species in the Vibrio genus and has a latent period of 15 min and a burst size of 95 ± 2 PFU/infected bacterium. Genome sequencing results show that ValSw3-3 has a 39,846-bp double-stranded DNA genome with a GC content of 43.1%. The similarity between the genome sequences of ValSw3-3 and those of other phages recorded in the GenBank database was below 50% (42%), suggesting that ValSw3-3 significantly differs from previously reported phages at the DNA level. Multiple genome comparisons and phylogenetic analysis based on the major capsid protein revealed that phage ValSw3-3 is grouped in a clade with five other phages, including Listonella phage phiHSIC (GenBank accession no. NC_006953.1), Vibrio phage P23 (MK097141.1), Vibrio phage pYD8-B (NC_021561.1), Vibrio phage 2E1 (KX507045.1), and Vibrio phage 12G5 (HQ632860.1), and is distinct from all known genera within the Siphoviridae family that have been ratified by the International Committee on Taxonomy of Viruses (ICTV). An in silico proteomic comparison of diverse phages from the Siphoviridae family supported this clustering result and suggested that ValSw3-3, phiHSIC, P23, pYD8-B, 2E1, and 12G5 should be classified as a novel genus cluster of Siphoviridae A subsequent analysis of core genes also revealed the common genes shared within this new cluster. Overall, these results provide a characterization of Vibrio phage ValSw3-3 and support our proposal of a new viral genus within the family SiphoviridaeIMPORTANCE Phage therapy has been considered a potential alternative to antibiotic therapy in treating bacterial infections. For controlling the vibriosis-causing pathogen Vibrio alginolyticus, well-documented phage candidates are still lacking. Here, we characterize a novel lytic Vibrio phage, ValSw3-3, based on its morphology, host range and infectivity, growth characteristics, stability under various conditions, and genomic features. Our results show that ValSw3-3 could be a potent candidate for phage therapy to treat V. alginolyticus infections due to its stronger infectivity and better pH and thermal stability than those of previously reported Vibrio phages. Moreover, genome sequence alignments, phylogenetic analysis, in silico proteomic comparison, and core gene analysis all support that this novel phage, ValSw3-3, and five unclassified phages form a clade distant from those of other known genera ratified by the ICTV. Thus, we propose a new viral genus within the Siphoviridae family to accommodate this clade, with ValSw3-3 as a representative member.


Subject(s)
Genome, Viral , Genomics , Siphoviridae/genetics , Vibrio alginolyticus/virology , Base Composition , Capsid Proteins/classification , DNA, Viral , Host Specificity , Microscopy, Electron, Transmission , Phylogeny , Proteomics , Sewage/virology , Siphoviridae/classification , Siphoviridae/isolation & purification , Siphoviridae/physiology , Vibrio alginolyticus/genetics , Whole Genome Sequencing
13.
Appl Microbiol Biotechnol ; 104(4): 1707-1720, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31907574

ABSTRACT

Vibrio alginolyticus is an important fish pathogen causing pandemic diseases in marine animals. Small noncoding RNAs (sRNAs) are important posttranscriptional modulators of gene expression and involved in the pathogenesis of bacterial pathogens. Thus far, no cell density-dependent sRNA has been reported in V. alginolyticus. In this study, a cell density-dependent sRNA, Qrr, predicted based on the previous RNA-Seq analysis of V. alginolyticus cultured at low cell density (LCD) and high cell density (HCD), was characterized. The Qrr mutant showed significantly impaired growth and decreased swimming and swarming ability, and increased biofilm formation, extracellular polysaccharide content, serine protease production, and LD50 values during zebrafish infection in contrast to the wild-type strain. Qrr modulates the master regulators LuxR and AphA in quorum sensing (QS) pathways possibly at the posttranscriptional level by base pairing with the 5'-untranslated regions (5'-UTRs). Meanwhile, both LuxR and AphA could directly bind to the promoter of qrr to activate or repress its transcription, respectively. Moreover, our unbiased metabolic approaches revealed that Qrr modulates a large quantity of metabolic and lipidomic pathways, including amino acids, purine and pyrimidine derivatives, tricarboxylic acid cycle (TCA cycle) intermediates, and lipids. Collectively, this work contributes to a systematic understanding of regulatory roles of the cell density-dependent sRNA, Qrr, in V. alginolyticus.


Subject(s)
Quorum Sensing/genetics , RNA, Small Untranslated/genetics , Vibrio alginolyticus/genetics , Vibrio alginolyticus/metabolism , 5' Untranslated Regions , Animals , Biofilms/growth & development , Lethal Dose 50 , Mutation , RNA Processing, Post-Transcriptional , Vibrio alginolyticus/pathogenicity , Virulence , Zebrafish
14.
Front Microbiol ; 10: 2337, 2019.
Article in English | MEDLINE | ID: mdl-31681202

ABSTRACT

Vibrio is one of the most detrimental agents of shrimp premature death syndrome. Phage therapy for prevention and treatment of Vibrio infections has attracted increasing attentions due to the emergence of antibiotic-resistant bacterial variants. Here, we describe a workflow of preparing a phage cocktail against Vibrio infections for practical applications. Twenty Vibrio strains were isolated from the gut of diseased shrimp and aquaculture wastewater, and five of them were identified as pathogens causing shrimp vibriosis. Twenty-two lytic phages were then isolated using the above five pathogens as hosts, and five of them showed broad host ranges and high lytic capability against the Vibrio strains. Whole genomic sequencing and phylogenetic analysis of the five phages indicated that they are novel and belong to the Siphoviridae family. The phage cocktail consisting of these five phages showed higher efficiency in inhibiting the growth of pathogenic Vibrio sp. Va-F3 than any single phage in vitro. We then evaluated the performance of the phage cocktail in protecting shrimp against Vibrio sp. Va-F3 infections in situ. The results showed that shrimp survival rates could reach 91.4 and 91.6% in 7 days, for the cocktail-treated and the antibiotic-treated groups, respectively. By contrast, the shrimp survival rate of the group without any treatment was only 20.0%. Overall, this study describes a general workflow of how to prepare a phage cocktail and apply it in controlling bacterial infections in the shrimp aquaculture. Knowledge gained from this study will not only help fight against the shrimp vibriosis in practical but also facilitate the design of phage cocktails with a satisfying performance in controlling other animal diseases in aquaculture.

15.
Sheng Wu Gong Cheng Xue Bao ; 35(2): 319-326, 2019 Feb 25.
Article in Chinese | MEDLINE | ID: mdl-30806062

ABSTRACT

This study aimed to obtain a recombinant human-source collagen for industrialization. First, based on the Gly-X-Y sequence of human type I collagen, we optimized the hydrophilic Gly-X-Y collagen peptide, designed the human collagen amino acid sequence and the corresponding nucleotide sequence. Next, the expression vector pPIC9K-COL was constructed via endonuclease digestion technology. We obtained an engineering strain of human-source collagen by electrotransforming Pichia pastoris, and then it was fermented, purified and identified. As a result, the expression level reached 4.5 g/L and the purity was over 95%. After amino acid N-terminal sequencing, molecular weight analysis, amino acid analysis and collagenase degradation test, we confirmed that the obtained collagen was consistent with designed primary structure of human-source collagen. After freeze-drying, we analyzed the collagen by scanning electron microscope and cell cytotoxicity, confirming that the collagen has porous fiber reticular structure and superior cytocompatibility. This indicates that human-source collagen has potential to be applied as biomedical material. In conclusion, we successfully obtained the expected human-source collagen and laid a foundation to its further application.


Subject(s)
Collagen/analysis , Pichia , Amino Acid Sequence , Biocompatible Materials , Freeze Drying , Humans , Recombinant Proteins
16.
Sci Rep ; 9(1): 734, 2019 01 24.
Article in English | MEDLINE | ID: mdl-30679786

ABSTRACT

Increasing evidences have revealed a close interaction between the intestinal microbes and host growth performance. The shrimp (Litopenaeus vannamei) gut harbors a diverse microbial community, yet its associations with dietary, body weight and weaning age remain a matter of debate. In this study, we analyzed the effects of different dietary (fishmeal group (NC), krill meal group (KM)) and different growth stages (age from 42 day-old to 98 day-old) of the shrimp on the intestinal microbiota. High throughput sequencing of the 16S rRNA genes of shrimp intestinal microbes determined the novelty of bacteria in the shrimp gut microbiota and a core of 58 Operation Taxonomic Units (OTUs) was present among the shrimp gut samples. Analysis results indicated that the development of the shrimp gut microbiota is a dynamic process with three stages across the age according to the gut microbiota compositions. Furthermore, the dietary of KM group did not significantly change the intestinal microbiota of the shrimps compared with NC group. Intriguingly, compared to NC group, we observed in KM group that a fluctuation of the shrimp gut microbiota coincided with the shrimp body weight gain between weeks 6-7. Six OTUs associated with the microbiota change in KM group were identified. This finding strongly suggests that the shrimp gut microbiota may be correlated with the shrimp body weight likely by influencing nutrient uptake in the gut. The results obtained from this study potentially will be guidelines for manipulation to provide novel shrimp feed management approaches.


Subject(s)
Bacteria/genetics , Gastrointestinal Microbiome/genetics , Penaeidae/microbiology , Animal Feed/microbiology , Animals , Aquaculture , Bacteria/classification , Body Weight , Humans , Penaeidae/genetics , RNA, Ribosomal, 16S/genetics
17.
Front Microbiol ; 9: 1476, 2018.
Article in English | MEDLINE | ID: mdl-30034378

ABSTRACT

As an alternative approach against multidrug-resistant bacterial infections, phages are now being increasingly investigated as effective therapeutic agents. Here, aiming to design an efficient phage cocktail against Aeromonas salmonicida infections, we isolated and characterized five lytic A. salmonicida phages, AS-szw, AS-yj, AS-zj, AS-sw, and AS-gz. The results of morphological and genomic analysis suggested that all these phages are affiliated to the T4virus genus of the Caudovirales order. Their heterogeneous lytic capacities against A. salmonicida strains were demonstrated by experiments. A series of phage cocktails were prepared and investigated in vitro. We observed that the cocktail combining AS-gz and AS-yj showed significantly higher antimicrobial activity than other cocktails and individual phages. Given the divergent genomes between the phages AS-yj and AS-gz, our results highlight that the heterogeneous mechanisms that phages use to infect their hosts likely lead to phage synergy in killing the host. Conclusively, our study described a strategy to develop an effective and promising phage cocktail as a therapeutic agent to combat A. salmonicida infections, and thereby to control the outbreak of relevant fish diseases. Our study suggests that in vitro investigations into phages are prerequisite to obtain satisfying phage cocktails prior to application in practice.

18.
Microb Pathog ; 97: 178-82, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27287497

ABSTRACT

Human papillomavirus (HPV) infection is an important factor that causes cervical cancer and non-melanoma skin cancer (NMSC), while HSV-2 plays an important role when HR-HPV triggers the cancer. Thus, a quick and convenient assay in the detection of HPV and HSV-2in the screening of HPV and HSV-2 infection is required. Two respective HPV and HSV-2 detection methods were established based on loop-mediated isothermal amplification (LAMP) assay. Specific outer primers, inner primers, and loop primers were designed according to the conserved domains of HPV and HSV-2 genomes, respectively, while degenerate primers were used for HPV assay. After optimizing the reaction conditions, the results were observed by LAMP Tubidimeter real-time LA-320. Standard plasmids HPV-L-P and HSV-2-L-P were cloned and used in sensitivity tests of HPV LAMP and HSV-2 LAMP, respectively. Fifty samples of actinic keratosis (AK), 20 samples of squamous cell carcinoma (SCC), 50 samples of basal cell carcinoma (BCC) and 20 samples of seborrheic keratosis (SK) were detected by HPV assay. Seventy three clinical samples of vaginitis, chronic cervicitis, cervical intraepithelial neoplasias and cervical cancer level positive were detected with HPV and HSV-2 assays. The reaction conditions of two assays were the same with a reaction temperature of 63 °C and a reaction time of 45 min. The sensitivity of HPV LAMP assay was 10 copies/µL, while that of the HSV-2 LAMP assay was 100 copies/µL. No cross-reactivity was observed. The HPV positive rates of AK, SCC, BCC and SK samples were 80% (40/50), 75% (15/20), 44% (22/50) and 21% (15/72), respectively. As an economic and quick diagnostic tool, LAMP assay is conducive to the extensive screening of HPV and HSV-2 and has huge potential to be promoted in resource-limited hospitals.


Subject(s)
Herpes Genitalis/diagnosis , Herpesvirus 2, Human/isolation & purification , Molecular Diagnostic Techniques/methods , Nucleic Acid Amplification Techniques/methods , Papillomaviridae/isolation & purification , Papillomavirus Infections/diagnosis , Cross Reactions , Female , Herpes Genitalis/virology , Herpesvirus 2, Human/genetics , Humans , Papillomaviridae/genetics , Papillomavirus Infections/virology , Sensitivity and Specificity , Temperature , Time Factors
19.
PLoS One ; 11(2): e0149004, 2016.
Article in English | MEDLINE | ID: mdl-26863207

ABSTRACT

Previous studies have reported inconsistent effects of dietary restriction (DR) on cortical inhibition. To clarify this issue, we examined the response properties of neurons in the primary visual cortex (V1) of DR and control groups of cats using in vivo extracellular single-unit recording techniques, and assessed the synthesis of inhibitory neurotransmitter GABA in the V1 of cats from both groups using immunohistochemical and Western blot techniques. Our results showed that the response of V1 neurons to visual stimuli was significantly modified by DR, as indicated by an enhanced selectivity for stimulus orientations and motion directions, decreased visually-evoked response, lowered spontaneous activity and increased signal-to-noise ratio in DR cats relative to control cats. Further, it was shown that, accompanied with these changes of neuronal responsiveness, GABA immunoreactivity and the expression of a key GABA-synthesizing enzyme GAD67 in the V1 were significantly increased by DR. These results demonstrate that DR may retard brain aging by increasing the intracortical inhibition effect and improve the function of visual cortical neurons in visual information processing. This DR-induced elevation of cortical inhibition may favor the brain in modulating energy expenditure based on food availability.


Subject(s)
Caloric Restriction , Neurons/physiology , Visual Cortex/physiology , gamma-Aminobutyric Acid/biosynthesis , Animal Feed , Animals , Blotting, Western , Body Weight , Brain/pathology , Brain Mapping , Cats , Diet , Electrophysiology , Enzyme-Linked Immunosorbent Assay , Female , Immunohistochemistry , Motion , Neural Inhibition/physiology , Orientation , Photic Stimulation , Time Factors , Visual Cortex/metabolism , gamma-Aminobutyric Acid/metabolism
20.
Zhonghua Yi Xue Za Zhi ; 93(15): 1150-2, 2013 Apr 16.
Article in Chinese | MEDLINE | ID: mdl-23902884

ABSTRACT

OBJECTIVE: To compared the outcomes of autogenous brachial-basilic arteriovenous fistula (BBAVF) and AV graft (AVG) in patients undergoing long-term hemodialysis. METHODS: Approved by Zhong Da hospital ethics committee, we analyzed 61 complex patients, 30 randomized to receive AVG and 31 received BBAVF. We compared patency rates of BBAVF and AVG in 3 months, 1 year, 2 years, 3 years, and complication rates. RESULTS: Patency rates of BBAVF in 3 months, 1 year, 2 years, 3 years were 100%, 96.8%, 90.3%, 87.1%, 3 years accumulative total infection rate was 3.2%, thrombosis rate was 3.2%. Patency rates of AVG in 3 months, 1 year, 2 years, 3 years were 96.7%, 50.0%, 36.7%, 33.3%, 3 years accumulative total infection rate was 26.7%, thrombosis rate was 33.3%. Patency rates of BBAVF in 1 year, 2 years, 3 years were higher than patency rates of AVG. The complication rates of infection and thrombosis were significantly lower for BBAVF than for AVG (P < 0.05, respectively). CONCLUSIONS: BBAVF has the advantage of a higher patency rate, a lower complication rates of infection and thrombosis, should be served as a favourable choice in building the vascular access in maintenance hemodialysis patients.


Subject(s)
Arteriovenous Shunt, Surgical/methods , Blood Vessel Prosthesis Implantation , Renal Dialysis/methods , Aged , Arteriovenous Fistula , Blood Vessel Prosthesis , Brachial Artery/surgery , Female , Humans , Male , Middle Aged , Treatment Outcome
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