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1.
Article in English | MEDLINE | ID: mdl-32024309

ABSTRACT

The LACE index and HOSPITAL score models are the two most commonly used prediction models identifying patients at high risk of readmission with limited information for home care patients. This study compares the effectiveness of these two models in predicting 30-day readmission following acute hospitalization of such patients in Taiwan. A cohort of 57 home care patients were enrolled and followed-up for one year. We compared calibration, discrimination (area under the receiver operating curve, AUC), and net reclassification improvement (NRI) to identify patients at risk of 30-day readmission for both models. Moreover, the cost-effectiveness of the models was evaluated using microsimulation analysis. A total of 22 readmissions occurred after 87 acute hospitalizations during the study period (readmission rate = 25.2%). While the LACE score had poor discrimination (AUC = 0.598, 95% confidence interval (CI) = 0.488-0.702), the HOSPITAL score achieved helpful discrimination (AUC = 0.691, 95% CI = 0.582-0.785). Moreover, the HOSPITAL score had improved the risk prediction in 38.3% of the patients, compared with the LACE index (NRI = 0.383, 95% CI = 0.068-0.697, p = 0.017). Both prediction models effectively reduced readmission rates compared to an attending physician's model (readmission rate reduction: LACE, 39.2%; HOSPITAL, 43.4%; physician, 10.1%; p < 0.001). The HOSPITAL score provides a better prediction of readmission and has potential as a risk management tool for home care patients.


Subject(s)
Home Care Services/statistics & numerical data , Models, Theoretical , Patient Readmission/statistics & numerical data , Aged , Aged, 80 and over , Cost-Benefit Analysis , Female , Hospitals , Humans , Male , Risk Management , Taiwan
2.
J Virol Methods ; 197: 25-8, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24321704

ABSTRACT

Vaccine-derived polioviruses (VDPVs) are associated with polio outbreaks and prolonged infections in individuals with primary immunodeficiencies. VDPV-specific PCR assays for each of the three Sabin oral poliovirus vaccine (OPV) strains were developed, targeting sequences within the VP1 capsid region that are selected for during replication of OPV in the human intestine. Over 2400 Sabin-related isolates and identified 755 VDPVs were screened. Sensitivity of all assays was 100%, while specificity was 100% for serotypes 1 and 3, and 76% for serotype 2. The assays permit rapid, sensitive identification of OPV-related viruses and flag programmatically important isolates for further characterization by genomic sequencing.


Subject(s)
Molecular Diagnostic Techniques/methods , Poliomyelitis/diagnosis , Poliomyelitis/virology , Poliovirus Vaccines/adverse effects , Poliovirus/isolation & purification , Real-Time Polymerase Chain Reaction/methods , Virology/methods , Humans , Poliovirus/genetics , Poliovirus Vaccines/administration & dosage , Sensitivity and Specificity , Time Factors
3.
J Virol Methods ; 174(1-2): 128-30, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21440569

ABSTRACT

The Global Polio Laboratory Network routinely uses poliovirus-specific PCR primers and probes to determine the serotype and genotype of poliovirus isolates obtained as part of global poliovirus surveillance. To provide detailed molecular epidemiologic information, poliovirus isolates are further characterized by sequencing the ~900-nucleotide region encoding the major capsid protein, VP1. It is difficult to obtain quality sequence information when clinical or environmental samples contain poliovirus mixtures. As an alternative to conventional methods for resolving poliovirus mixtures, sets of serotype-specific primers were developed for amplifying and sequencing the VP1 regions of individual components of mixed populations of vaccine-vaccine, vaccine-wild, and wild-wild polioviruses.


Subject(s)
Capsid Proteins/genetics , DNA Primers/genetics , Poliovirus/classification , Poliovirus/genetics , Polymerase Chain Reaction/methods , Sequence Analysis, DNA , Humans , Poliovirus/isolation & purification , Sensitivity and Specificity , Virology/methods
4.
J Clin Microbiol ; 47(6): 1939-41, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19386844

ABSTRACT

We have adapted our previously described poliovirus diagnostic reverse transcription-PCR (RT-PCR) assays to a real-time RT-PCR (rRT-PCR) format. Our highly specific assays and rRT-PCR reagents are designed for use in the WHO Global Polio Laboratory Network for rapid and large-scale identification of poliovirus field isolates.


Subject(s)
DNA Primers/genetics , Oligonucleotide Probes/genetics , Poliovirus/classification , Poliovirus/isolation & purification , RNA, Viral/genetics , Reverse Transcriptase Polymerase Chain Reaction/methods , Humans , Sensitivity and Specificity
5.
Virus Res ; 127(1): 17-25, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17449127

ABSTRACT

A type 2 vaccine-derived poliovirus (VDPV), differing from Sabin 2 at 2.5% (22/903) of VP1 nucleotide (nt) positions, was isolated from an incompletely immunized 21-month-old Nigerian child who developed acute flaccid paralysis in 2002. Sequences upstream of nt position 620 (within the 5'-untranslated region [5'-UTR]) and downstream of nt position 5840 (in the 3C(pro) region) were derived from species C enteroviruses unrelated to the oral poliovirus vaccine (OPV) strains. The two substitutions associated with the attenuated phenotype had either recombined out (A(481)-->G in the 5'-UTR) or reverted (Ile(143)-->Thr in VP1). The VDPV isolate had lost the temperature sensitive phenotype of Sabin 2 and it was antigenically distinct from the parental OPV strain, having amino acid substitutions in or near neutralizing antigenic sites 1 and 3. The date of the initiating OPV dose, calculated from the number of synonymous substitutions in the capsid region, was estimated to be approximately 16 to 18 months before onset of paralysis, a finding inconsistent with the most recent mass OPV campaign (conducted 12 days before onset of paralysis) as being the source of infection. Although no related type 2 VDPVs were detected in Nigeria or elsewhere, the VDPV was found in an area where conditions favor VDPV emergence and spread.


Subject(s)
Capsid Proteins/genetics , Poliomyelitis/virology , Poliovirus Vaccine, Oral/adverse effects , Poliovirus/isolation & purification , 5' Untranslated Regions/analysis , Capsid Proteins/immunology , Feces/virology , Genome, Viral , Humans , Infant , Male , Nigeria , Poliomyelitis/prevention & control , Poliovirus/genetics , Poliovirus Vaccine, Oral/administration & dosage , Recombination, Genetic , Vaccination , Vaccines, Synthetic/adverse effects
6.
J Virol ; 79(20): 12623-34, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16188964

ABSTRACT

We determined the complete genomic sequences of nine type 1 immunodeficient vaccine-derived poliovirus (iVDPV) isolates obtained over a 337-day period from a poliomyelitis patient from Taiwan with common variable immunodeficiency. The iVDPV isolates differed from the Sabin type 1 oral poliovirus vaccine (OPV) strain at 1.84% to 3.15% of total open reading frame positions and had diverged into at least five distinct lineages. Phylogenetic analysis suggested that the chronic infection was initiated by the fifth and last OPV dose, given 567 days before onset of paralysis, and that divergence of major lineages began very early in the chronic infection. Key determinants of attenuation in Sabin 1 had reverted in the iVDPV isolates, and representative isolates of each lineage showed increased neurovirulence for PVR-Tg21 transgenic mice. None of the isolates had retained the temperature-sensitive phenotype of Sabin 1. All isolates were antigenic variants of Sabin 1, having multiple amino acid substitutions within or near neutralizing antigenic sites 1, 2, and 3a. Antigenic divergence of the iVDPV variants from Sabin 1 followed two major independent evolutionary pathways. The emergence of distinct coreplicating lineages suggests that iVDPVs can replicate for many months at separate sites in the gastrointestinal tract. Some isolates had mosaic genome structures indicative of recombination across and within lineages. iVDPV excretion apparently ceased after 30 to 35 months of chronic infection. The appearance of a chronic VDPV excretor in a tropical, developing country has important implications for the strategy to stop OPV immunization after eradication of wild polioviruses.


Subject(s)
Common Variable Immunodeficiency/complications , Poliomyelitis/prevention & control , Poliomyelitis/virology , Poliovirus Vaccine, Oral/administration & dosage , Poliovirus/genetics , Vaccination , Amino Acid Substitution , Animals , Antigens, Viral/genetics , Base Sequence , Child , Chronic Disease , Feces/virology , Female , Genome, Viral , Humans , Male , Mice , Mice, Transgenic , Molecular Sequence Data , Pharynx/virology , Phylogeny , Poliovirus/isolation & purification , Poliovirus/pathogenicity , Recombination, Genetic , Sequence Alignment , Virulence
7.
J Virol ; 77(15): 8366-77, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12857906

ABSTRACT

From 1988 to 1993, 30 cases of poliomyelitis associated with poliovirus type 2 were found in seven governorates of Egypt. Because many of the cases were geographically and temporally clustered and because the case isolates differed antigenically from the vaccine strain, it was initially assumed that the cases signaled the continued circulation of wild type 2 poliovirus. However, comparison of sequences encoding the major capsid protein, VP1 (903 nucleotides), revealed that the isolates were related (93 to 97% nucleotide sequence identity) to the Sabin type 2 oral poliovirus vaccine (OPV) strain and unrelated (<82% nucleotide sequence identity) to the wild type 2 polioviruses previously indigenous to Egypt (last known isolate: 1979) or to any contemporary wild type 2 polioviruses found elsewhere. The rate and pattern of VP1 divergence among the circulating vaccine-derived poliovirus (cVDPV) isolates suggested that all lineages were derived from a single OPV infection that occurred around 1983 and that progeny from the initiating infection circulated for approximately a decade within Egypt along several independent chains of transmission. Complete genomic sequences of an early (1988) and a late (1993) cVDPV isolate revealed that their 5' untranslated region (5' UTR) and noncapsid- 3' UTR sequences were derived from other species C enteroviruses. Circulation of type 2 cVDPVs occurred at a time of low OPV coverage in the affected communities and ceased when OPV coverage rates increased. The potential for cVDPVs to circulate in populations with low immunity to poliovirus has important implications for current and future strategies to eradicate polio worldwide.


Subject(s)
Endemic Diseases , Poliomyelitis/epidemiology , Poliovirus Vaccine, Oral , Poliovirus , Animals , Capsid Proteins/genetics , Egypt/epidemiology , Female , Humans , Male , Mice , Mice, Transgenic , Molecular Sequence Data , Poliomyelitis/virology , Poliovirus/classification , Poliovirus/genetics , Poliovirus/isolation & purification , Poliovirus/pathogenicity , Sequence Analysis, DNA , Vaccination
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