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1.
Int J Mol Sci ; 24(18)2023 Sep 20.
Article in English | MEDLINE | ID: mdl-37762645

ABSTRACT

Surface staining has emerged as a rapid technique for applying external stains to trace cellular identities in diverse populations. In this study, we developed a distinctive aptamer with selective binding to cell surface nucleolin (NCL), bypassing cytoplasmic internalization. Conjugation of the aptamer with a FAM group facilitated NCL visualization on live cell surfaces with laser confocal microscopy. To validate the aptamer-NCL interaction, we employed various methods, including the surface plasmon resonance, IHC-based flow cytometry, and electrophoretic mobility shift assay. The G-quadruplex formations created by aptamers were confirmed with a nuclear magnetic resonance and an electrophoretic mobility shift assay utilizing BG4, a G-quadruplex-specific antibody. Furthermore, the aptamer exhibited discriminatory potential in distinguishing between cancerous and normal cells using flow cytometry. Notably, it functioned as a dynamic probe, allowing real-time monitoring of heightened NCL expression triggered by a respiratory syncytial virus (RSV) on normal cell surfaces. This effect was subsequently counteracted with dsRNA transfection and suppressed the NCL expression; thus, emphasizing the dynamic attributes of the probe. These collective findings highlight the robust versatility of our aptamer as a powerful tool for imaging cell surfaces, holding promising implications for cancer cell identification and the detection of RSV infections.

2.
Zool Res ; 43(3): 442-456, 2022 05 18.
Article in English | MEDLINE | ID: mdl-35503560

ABSTRACT

Mutations in serologically defined colon cancer autoantigen protein 8 ( SDCCAG8) were first identified in retinal ciliopathy families a decade ago with unknown function. To investigate the pathogenesis of SDCCAG8-associated retinal ciliopathies in vivo, we employed CRISPR/Cas9-mediated homology-directed recombination (HDR) to generate two knock-in mouse models, Sdccag8Y236X/Y236X and Sdccag8E451GfsX467/E451GfsX467 , which carry truncating mutations of the mouse Sdccag8, corresponding to mutations that cause Bardet-Biedl syndrome (BBS) and Senior-Løken syndrome (SLS) (c.696T>G p.Y232X and c.1339-1340insG p.E447GfsX463) in humans, respectively. The two mutant Sdccag8 knock-in mice faithfully recapitulated human SDCCAG8-associated BBS phenotypes such as rod-cone dystrophy, cystic renal disorder, polydactyly, infertility, and growth retardation, with varied age of onset and severity depending on the hypomorphic strength of the Sdccag8 mutations. To the best of our knowledge, these knock-in mouse lines are the first BBS mouse models to present with the polydactyly phenotype. Major phototransduction protein mislocalization was also observed outside the outer segment after initiation of photoreceptor degeneration. Impaired cilia were observed in the mutant photoreceptors, renal epithelial cells, and mouse embryonic fibroblasts derived from the knock-in mouse embryos, suggesting that SDCCAG8 plays an essential role in ciliogenesis, and cilium defects are a primary driving force of SDCCAG8-associated retinal ciliopathies.


Subject(s)
Bardet-Biedl Syndrome , Ciliopathies , Polydactyly , Rodent Diseases , Animals , Autoantigens/genetics , Autoantigens/metabolism , Bardet-Biedl Syndrome/genetics , Bardet-Biedl Syndrome/metabolism , Bardet-Biedl Syndrome/veterinary , Ciliopathies/genetics , Ciliopathies/metabolism , Ciliopathies/veterinary , Fibroblasts , Mice , Mutation , Neoplasm Proteins/genetics , Neoplasm Proteins/metabolism , Polydactyly/veterinary
3.
Zool Res ; 42(4): 482-486, 2021 Jul 18.
Article in English | MEDLINE | ID: mdl-34235896

ABSTRACT

Retinitis pigmentosa (RP) is an inherited retinal degenerative disease that begins with defective rod photoreceptor function, followed by impaired cone function, and complete blindness in its late stage. To date, however, there is no effective treatment for RP. By carrying a nonsense mutation in the Pde6b gene, rd1 mice display elevated cGMP in conjunction with higher intracellular Ca 2+ in their rod photoreceptors, resulting in fast retinal degeneration. Ca 2+ has been linked to activation of the mammalian target of rapamycin (mTOR) pathway. The mTOR pathway integrates extracellular and intracellular signals to sense the supply of nutrients and plays a central role in regulating protein and lipid synthesis as well as apoptosis and autophagy. In the present study, we showed that mTOR and phosphorylated mTOR (p-mTOR, activated form of mTOR) are up-regulated in rd1 photoreceptors at postnatal day 10 (P10), a pre-degenerative stage. Moreover, the downstream effectors of mTOR, such as pS6K and S6K, are also increased, suggesting activation of the mTOR signaling pathway. Intravitreal administration of rapamycin, a negative regulator of mTOR, inhibits the mTOR pathway in rd1 photoreceptors. Consequently, the progression of retinal degeneration is slower and retinal function is enhanced, possibly mediated by activation of autophagy in the photoreceptors. Taken together, these results highlight rapamycin as a potential therapeutic avenue for retinal degeneration.


Subject(s)
Retinal Cone Photoreceptor Cells/drug effects , Retinal Cone Photoreceptor Cells/pathology , Retinal Degeneration/prevention & control , Retinal Rod Photoreceptor Cells/drug effects , Retinal Rod Photoreceptor Cells/pathology , Sirolimus/pharmacology , TOR Serine-Threonine Kinases/antagonists & inhibitors , Animals , Mice , Retinal Degeneration/drug therapy , Signal Transduction/drug effects , Sirolimus/therapeutic use
4.
Chin Med J (Engl) ; 133(10): 1175-1181, 2020 May 20.
Article in English | MEDLINE | ID: mdl-32433049

ABSTRACT

BACKGROUND: Patients carrying the HongKongαα (HKαα) allele and -α/ααα could be misdiagnosed as -α/αα by the current conventional thalassemia detection methods, leading to inaccurate genetic counseling and an incorrect prenatal diagnosis. This study was aimed to accurately analyze the genotypes of HKαα carriers and -α/ααα. METHODS: Samples were collected in our hospital from July 2017 to October 2019. Twenty-four common types of Chinese thalassemia were screened by gap-polymerase chain reaction (Gap-PCR) and reverse dot blot (RDB). Anti-4.2 multiplex-PCR was used to confirm carriers of the ααα duplication with -α deletion. Two-round nested PCR and multiplex ligation-dependent probe amplification (MLPA) were applied to accurately identify and confirm their genotypes. For data analysis, we used descriptive statistics and Fisher's exact tests. RESULTS: Two thousand five hundred and forty-four cases were identified as thalassemia in 5488 peripheral blood samples. The results showed that α, ß, and αß compound thalassemia were identified in 1190 (46.78%), 1286 (50.55%), and 68 (2.67%) cases, respectively. A total of 227 samples from thalassemia patients were identified as -α/αα by Gap-PCR, and the genotypes of two samples were uncertain. There was a difference between Gap-PCR and combined groups (Gap-PCR combined with nested PCR and MLPA) in detecting HKαα (P < 0.05). Among the 229 patients, 20 patients were identified as HKαα carriers and one was identified as -α/ααα by two-round nested PCR and MLPA, including 15 patients with HKαα/αα, three with HKαα/αα and ß-thalassemia coinheritance, one with HKαα/--, one with HKαα/-α and ß-thalassemia coinheritance, and one with -α/ααα and ß-thalassemia coinheritance. CONCLUSIONS: ααα and HKαα genotypes of patients carrying -α need to be detected to reduce the misdiagnosis rate of patients carrying HKαα and -α3.7/ααα alleles. More accurate genetic counseling can be provided in the clinic using nested PCR combined with MLPA.


Subject(s)
Multiplex Polymerase Chain Reaction , alpha-Thalassemia , Alleles , Female , Genotype , Heterozygote , Humans , Pregnancy , alpha-Thalassemia/diagnosis , alpha-Thalassemia/genetics
5.
Plant Cell ; 32(2): 392-413, 2020 02.
Article in English | MEDLINE | ID: mdl-31806675

ABSTRACT

The spikelet is an inflorescence structure unique to grasses. The molecular mechanisms underlying spikelet development and evolution are unclear. In this study, we characterized three allelic recessive mutants in rice (Oryza sativa): nonstop glumes 1-1 (nsg1-1), nsg1-2, and nsg1-3 In these mutants, organs such as the rudimentary glume, sterile lemma, palea, lodicule, and filament were elongated and/or widened, or transformed into lemma- and/or marginal region of the palea-like organs. NSG1 encoded a member of the C2H2 zinc finger protein family and was expressed mainly in the organ primordia of the spikelet. In the nsg1-1 mutant spikelet, LHS1 DL, and MFO1 were ectopically expressed in two or more organs, including the rudimentary glume, sterile lemma, palea, lodicule, and stamen, whereas G1 was downregulated in the rudimentary glume and sterile lemma. Furthermore, the NSG1 protein was able to bind to regulatory regions of LHS1 and then recruit the corepressor TOPLESS-RELATED PROTEIN to repress expression by downregulating histone acetylation levels of the chromatin. The results suggest that NSG1 plays a pivotal role in maintaining organ identities in the spikelet by repressing the expression of LHS1, DL, and MFO1.


Subject(s)
CYS2-HIS2 Zinc Fingers/genetics , Oryza/genetics , Oryza/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Gene Expression Regulation, Plant , Genes, Plant/genetics , Genetic Engineering , Inflorescence , Mutation , Phenotype , Transcriptome
6.
PLoS One ; 7(11): e50579, 2012.
Article in English | MEDLINE | ID: mdl-23226319

ABSTRACT

Dystrophic epidermolysis bullosa is an inherited bullous dermatosis caused by the COL7A1 gene mutation in autosomal dominant or recessive mode. COL7A1 gene encodes type VII collagen - the main component of the anchoring fibrils at the dermal-epidermal junction. Besides the 730 mutations reported, we identified two novel COL7A1 gene mutations in a Chinese family, which caused recessive dystrophic epidermolysis bullosa (RDEB). The diagnosis was established histopathologically and ultrastructurally. After genomic DNA extraction from the peripheral blood sample of all subjects (5 pedigree members and 136 unrelated control individuals), COL7A1 gene screening was performed by polymerase chain reaction amplification and direct DNA sequencing of the whole coding exons and flanking intronic regions. Genetic analysis of the COL7A1 gene in affected individuals revealed compound heterozygotes with identical novel mutations. The maternal mutation is a 2-bp deletion at exon 8 (c.1006_1007delCA), leading to a subsequent reading frame-shift and producing a premature termination codon located 48 amino acids downstream in exon 9 (p.Q336EfsX48), consequently resulting in the truncation of 2561 amino acids downstream. This was only present in two affected brothers, but not in the other unaffected family members. The paternal mutation is a 1-bp deletion occurring at the first base of intron 65 (c.IVS5568+1delG) that deductively changes the strongly conserved GT dinucleotide at the 5' donor splice site, results in subsequent reading-through into intron 65, and creates a stop codon immediately following the amino acids encoded by exon 65 (GTAA→TAA). This is predicted to produce a truncated protein lacking of 1089 C-terminal amino acids downstream. The latter mutation was found in all family members except one of the two unaffected sisters. Both mutations were observed concurrently only in the two affected brothers. Neither mutation was discovered in 136 unrelated Chinese control individuals. This study reveals novel disease-causing mutations in the COL7A1 gene.


Subject(s)
Asian People/genetics , Collagen Type VII/genetics , Epidermolysis Bullosa Dystrophica/genetics , Exons/genetics , Introns/genetics , Mutation , Siblings , Adult , Base Sequence , DNA Mutational Analysis , Epidermolysis Bullosa Dystrophica/pathology , Genes, Recessive/genetics , Humans , Male
7.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 29(5): 570-2, 2012 Oct.
Article in Chinese | MEDLINE | ID: mdl-23042396

ABSTRACT

OBJECTIVE: A R1210C mutation of complement factor H (CFH) gene has been associated with age-related macular degeneration (AMD) in Caucasian population. This study was to verify above association in Han Chinese population. METHODS: The mutation was detected by direct sequencing in 258 patients with wet AMD and 426 matched controls. RESULTS: The R1210C mutation has not been identified in either sample. CONCLUSION: The R1210C mutation in CFH gene is not associated with AMD in Han Chinese population.


Subject(s)
Complement Factor H/genetics , Macular Degeneration/genetics , Mutation , Aged , Aged, 80 and over , Female , Humans , Male , Middle Aged
8.
Chin Med J (Engl) ; 125(15): 2663-70, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22931972

ABSTRACT

BACKGROUND: Chromosomal abnormalities have been shown to play an important prognostic role in multiple myeloma (MM). Interphase fluorescence in situ hybridization (i-FISH) has been much more effective to identify cytogenetic aberrations in MM than conventional cytogenetic technique (CC). To clearly determine the cytogenetic features of Chinese MM patients and identify their prognostic implications, we designed a multicenter study based on i-FISH including 672 patients from 52 hospitals in China. METHODS: All 672 patients were systematically screened for the following genomic aberrations: del(13q), IgH rearrangement, del(p53) and 1q21 amplifications. RESULTS: The analysis showed that the chromosomal changes were detected in 22.1% patients by CC and in 82.3% patients by i-FISH. The most common abnormalities by CC were chromosome 1 aberrations (48.4%), -13/13q- (37.6%), hyperdiploidy (36.6%), hypodiploidy (30.1%) and IgH rearrangements (23.7%). The most frequent abnormalities by FISH was del(13q), which was found in 60.4% patients, whereas IgH rearrangement, 1q21 amplification and p53 deletions were detected in 57.6%, 49.0% and 34.7% cases, respectively. By statistical analysis, -13/13q- by CC was associated with low level of platelet (P = 0.015), hyperdiploidy was associated with low level of serum albumin (P = 0.028), and IgH rearrangement by FISH was associated with high level of ß2 microglobulin (P = 0.019). Moreover, 1q21 amplification and del(p53) by FISH conferred a high incidence of progressive disease (PD) after initial therapy. Metaphase detection of IgH rearrangements and chromosome 1 aberrations concurrently was associated with a short progression free survival (PFS) (P = 0.036). No significant prognostic implications of other cytogenetic abnormalities were found associated with overall survival and PFS. CONCLUSIONS: Chinese MM patients had similar cytogenetic abnormalities compared with the previous reported studies. However, the prognostic significance of FISH aberrations were not clearly determined and further study is required.


Subject(s)
Cytogenetic Analysis , Multiple Myeloma/genetics , Multiple Myeloma/pathology , Adult , China , Chromosome Aberrations , Chromosomes, Human, Pair 1/genetics , Female , Humans , In Situ Hybridization, Fluorescence , Karyotyping , Male , Middle Aged
9.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 29(2): 194-9, 2012 Apr.
Article in Chinese | MEDLINE | ID: mdl-22487833

ABSTRACT

OBJECTIVE: To study the associations of single nucleotide polymorphisms (SNPs) of TCF7L2, CDKAL1, SLC30A8, HHEX with diabetic retinopathy (DR) and nephropathy (DN) in type 2 diabetes mellitus. METHODS: A total of 479 subjects with DR,248 with DN and 650 without DR or DN were recruited to assess the associations between SNPs of TCF7L2 (rs7903146, rs6585205, rs11196218), CDKAL1 (rs10946398,rs4712527), SLC30A8 (rs13266634, rs3802177, rs11558471) and HHEX (rs1111875, rs7923837) and the development of DR and DN. RESULTS: There were significant differences in genotypic and allele frequencies of rs11558471 (SLC30A8) between DR and control groups (P< 0.05), the odds ratio (OR) values of A and AA were 1.27 and 1.68. The distributions of genotype and allele frequency for rs11196218 (TCF7L2) were significantly different between DN and control group (P=0.0051,OR=1.37). However, the P value after Bonferroni correction showed no significant difference. No significant differences were found in the distributions of rs13266634 and rs3802177 (SLC30A8), rs10946398 (CDKAL1), rs6585205, rs7903146 and rs11196218 (TCF7L2) and rs7923837 (HHEX) between DR and control groups, and nor significant differences were found in distributions of rs6585205 (TCF7L2), rs4712527 (CDKAL1), rs13266634, rs3802177 and rs11558471 (SLC30A8), and 7923837 (HHEX) between DN and control groups, though for all comparison the OR values were greater than 1. CONCLUSION: Polymorphisms of SLC30A8 and TCF7L2 genes may be associated with the development of DR and DN, respectively. Association between the polymorphisms of CKDAL1, TCF7L2 and HHEX genes and DR, and between the polymorphisms of SLC30A8, HHEX and CDKAL1 genes and DN, cannot be excluded.


Subject(s)
Cation Transport Proteins/genetics , Cyclin-Dependent Kinase 5/genetics , Diabetes Mellitus, Type 2/genetics , Diabetic Angiopathies/genetics , Homeodomain Proteins/genetics , Transcription Factor 7-Like 2 Protein/genetics , Transcription Factors/genetics , Diabetes Mellitus, Type 2/complications , Female , Humans , Male , Middle Aged , Polymorphism, Single Nucleotide , Zinc Transporter 8 , tRNA Methyltransferases
10.
Biomaterials ; 32(34): 9059-67, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21880365

ABSTRACT

In vitro or in vivo bioimaging utilizing the upconversion (UC) luminescence of rare earth fluoride nanocrystals (NCs) has attracted much attention, especially for Yb(3+)/Tm(3+) doped NCs with a near-infrared (NIR) UC emission at 800 nm. Herein, water-soluble NaYF(4):Yb,Tm NCs with strong NIR UC emission were synthesized with a solvothermal method. In vitro and in vivo bioimaging and toxicity assessments were carried out with HeLa cell and Caenorhabditis elegans (C. elegans) cases, respectively. NaYF(4):Yb,Tm NCs afforded an efficient NIR image of the HeLa cells with an incubation concentration of 10 µg mL(-1), and CCK-8 assay revealed a low cytotoxicity. Fed with Escherichia coli (E. coli) and NCs together, the C. elegans showed a NIR image in the gut from the pharynx to the anus. Further, these NCs could be excreted out when those worms were then fed with only E. coli. Toxicity studies were further addressed with protein expression, life span, egg production, egg viability, and growth rate of the worms in comparison with those of the intact ones. The feeding of rare earth fluoride NCs with a dose of 100 µg does not arise obvious toxicity effect from the growth to procreation. The in vitro and in vivo studies confirm that NaYF(4):Yb,Tm NCs could be served as an excellent NIR emission bioprobe with low toxicity.


Subject(s)
Fluorides/analysis , Nanoparticles/analysis , Nanoparticles/toxicity , Spectroscopy, Near-Infrared/methods , Thulium/analysis , Ytterbium/analysis , Yttrium/analysis , Animals , Caenorhabditis elegans/ultrastructure , Cell Survival , Fluorides/chemistry , Fluorides/toxicity , HeLa Cells , Humans , Luminescent Agents/analysis , Luminescent Agents/chemistry , Luminescent Agents/toxicity , Nanoparticles/chemistry , Nanoparticles/ultrastructure , Thulium/chemistry , Thulium/toxicity , Ytterbium/chemistry , Ytterbium/toxicity , Yttrium/chemistry , Yttrium/toxicity
11.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 27(3): 305-9, 2010 Jun.
Article in Chinese | MEDLINE | ID: mdl-20533271

ABSTRACT

OBJECTIVE: To study the association between the single nucleotide polymorphisms (SNPs) in the high-temperature requirement A-1 (HTRA1) gene and rheumatoid arthritis (RA) in Chinese Han population. METHODS: Five SNPs in the HTRA1 gene (rs2014307, rs2248799, rs2300433, rs714816 and rs2268356) were genotyped by ABI Snapshot method in Han Chinese cohort composed of 344 patients with RA and 288 healthy controls. The serum rheumatoid factor (RF) and C-reactive protein (CRP) of the patients were determined by endpoint nephelometry method. RESULTS: Genotypes of all the five SNPs in the HTRA1 gene were not significantly different between the RA patients and controls (P> 0.05). Haplotypes generated by these five SNPs did not show significantly difference between the two groups either (P> 0.05). Serum RF levels in the RA patients had no significant difference among the genotypes for four SNPs (rs2014307, rs2248799, rs714816, and rs2268356) in the HTRA1 gene, while RF levels in the RA patients with genotypes AA+AG of the rs2300433 locus were significantly higher than that in genotype GG carriers (P< 0.05). Serum CRP levels in the RA patients had no significant difference among the genotypes for all the five SNPs. CONCLUSION: Author's results suggested that although the five SNPs in the HTRA1 gene were not associated with RA in Chinese Han population, RF levels in the RA patients with genotypes AA and AG in the rs2300433 locus were significantly higher than the GG carriers. The HTRA1 role in RF regulation needs to be further investigated.


Subject(s)
Arthritis, Rheumatoid/genetics , Polymorphism, Single Nucleotide/genetics , Serine Endopeptidases/genetics , Aged , Female , Genetic Predisposition to Disease/genetics , Genotype , Haplotypes , High-Temperature Requirement A Serine Peptidase 1 , Humans , Male , Middle Aged , Polymerase Chain Reaction
12.
J Integr Plant Biol ; 52(3): 265-72, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20377687

ABSTRACT

In order to gain a better understanding of rice flower development, a rice flower mutant supernumerary lodicules (snl), which was identified from ethyl methane sulfonate (EMS)-treated Jinhui10 (Oryza sativa L. ssp. indica) was used in the present study. In the snl mutant, the palea obtained lemma identity, additional glume-like organs formed, lodicules increased and elongated, stamens decreased, and a few aberrant carpels formed. These phenotypes suggest that SNL is involved in the entire rice flower development. SNL was mapped between two simple sequence repeat markers RM3512 and RM1342 on chromosome 2, an approximate 800 kb region, and it co-segregated with SSR215. We conclude that SNL is a novel gene involved in flower development in rice. The present study will be useful for further cloning of the SNL gene, which will contribute to the elucidation of rice flower development.


Subject(s)
Chromosome Mapping , Flowers/anatomy & histology , Flowers/genetics , Genes, Plant/genetics , Mutation/genetics , Oryza/genetics , Plant Proteins/genetics , Chromosomes, Plant/genetics , Flowers/growth & development , Flowers/ultrastructure , Genetic Linkage , Genetic Markers , Oryza/anatomy & histology , Oryza/growth & development , Phenotype , Plant Proteins/metabolism
13.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 26(4): 414-8, 2009 Aug.
Article in Chinese | MEDLINE | ID: mdl-20017306

ABSTRACT

Myopia is an important cause of blindness, in which an image is focused in front of the retina. Genetic factors have been implicated in the pathogenesis of myopia. Based on the molecular genetic study, some genetic loci linked to myopia have been mapped, but no disease-causing gene has been identified. Here authors review the genetic study on myopia, including gene mapping and candidate gene screening.


Subject(s)
Myopia/genetics , Animals , Chromosome Mapping , Chromosomes, Human/genetics , Genetic Testing , Humans
14.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 26(5): 499-503, 2009 Oct.
Article in Chinese | MEDLINE | ID: mdl-19806567

ABSTRACT

OBJECTIVE: To perform linkage analysis and mutation screening in a Chinese family with familial hpertriglyceridemia (FHTG). METHODS: Thirty-two family members including 12 hypertriglyceridemia patients participated in the study. Genotyping and haplotype analysis for 22 subjects were performed using short tandem repeat (STR) microsatellite polymorphism markers on 16 candidate genes and/or loci related to lipid metabolism. Two of the sixteen known candidate genes, APOA2 and USF1 were screened for mutation by direct DNA sequencing. RESULTS: No linkage was found between the candidate genes/loci of APOA5, LIPI, RP1, APOC2, ABC1, LMF1, APOA1-APOC3-APOA4, LPL, APOB, CETP, LCAT, LDLR, APOE and the phenotype in this family. The two-point Lod scores (theta =0) were all less than-1.0 for all the markers tested. Linkage analysis suggested linkage to chromosome 1q23.3-24.2 between the disease phenotype and STR marker D1S194 with a two-point maximum Lod score of 2.44 at theta =0. Fine mapping indicated that the disease gene was localized to a 5.87 cM interval between D1S104 and D1S196. No disease-causing mutation was detected in the APOA2 and USF1 genes. CONCLUSION: The above mentioned candidate genes were excluded as the disease causing genes for this family. The results implied that there might be a novel gene/locus for FHTG on chromosome 1q23.3-1q24.2.


Subject(s)
Genetic Linkage , Hyperlipoproteinemia Type IV/genetics , Adult , Chromosome Mapping , Chromosomes, Human, Pair 1/genetics , Genotype , Haplotypes , Humans , Lod Score , Male , Middle Aged , Pedigree
15.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 26(5): 542-5, 2009 Oct.
Article in Chinese | MEDLINE | ID: mdl-19806578

ABSTRACT

OBJECTIVE: To identify the mutation in the PAX6 gene in a family with congenital aniridia and cataract. METHODS: Total genomic DNA was extracted from peripheral blood leukocytes of 12 family members including three living affected members and 96 unrelated healthy controls. The coding exons 4-13 of the PAX6 gene with intronic flanking sequences were amplified by polymerase chain reaction (PCR). By comparing sequences of the affected members with that of normal individuals, the disease-causing mutation was detected by direct DNA sequencing. RESULTS: A PAX6 mutation was identified in the 3 patients, which did not exist in the unaffected members and unrelated healthy individuals. The nonsense mutation of C to T was detected at the nucleotide 1143, which converted the Arg codon (CGA) to a stop codon(TGA) (R261X) in exon 10. CONCLUSION: The mutation (R261X) detected in the present study is considered to result in the occurrence of congenital aniridia and cataract in the Chinese family.


Subject(s)
Aniridia/genetics , Cataract/genetics , Codon, Nonsense , Eye Proteins/genetics , Homeodomain Proteins/genetics , Paired Box Transcription Factors/genetics , Repressor Proteins/genetics , Amino Acid Sequence , Asian People/genetics , Base Sequence , Cataract/congenital , Humans , Male , Molecular Sequence Data , PAX6 Transcription Factor , Pedigree
16.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 26(1): 70-3, 2009 Feb.
Article in Chinese | MEDLINE | ID: mdl-19199256

ABSTRACT

OBJECTIVE: To map the disease-causing gene in a Chinese family with autosomal dominant retinitis pigmentosa. METHODS: Twenty-seven micro-satellite markers were randomly selected from the region around the known loci of causative genes, and haplotypes were determined by ABI3100 genetic analyzer. Two-point linkage analysis was performed using MLINK. RESULTS: The Lod score of each marker vs adRP was below 1. CONCLUSION: The phenotype of this family may not be caused by mutation of the known disease-causing genes.


Subject(s)
Asian People/genetics , Genes, Dominant , Genetic Testing , Pedigree , Retinitis Pigmentosa/diagnosis , Retinitis Pigmentosa/genetics , China , Female , Genetic Linkage , Humans , Male , Microsatellite Repeats/genetics , Mutation , Phenotype , Retinitis Pigmentosa/pathology
17.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 25(4): 424-6, 2008 Aug.
Article in Chinese | MEDLINE | ID: mdl-18683142

ABSTRACT

OBJECTIVE: To map the high myopia gene in a Chinese family with autosomal dominant high myopia. METHODS: A family with autosomal dominant high myopia in three generations was collected. Eighteen short-tandem-repeat markers on previously reported loci linked to high myopia were chosen for genotyping and two-point linkage analysis was carried out. RESULTS: The spherical equivalent of affected individuals ranges from -6.00D to -20.00D and the genetic pattern is autosomal dominant. The LOD score was less than -1 in all 18 microsatellite markers, indicating that there was no linkage between these markers and the high myopia related genes in this family. CONCLUSION: A novel myopia locus for high-grade myopia may exist in the kindred. Genome-wide scan will be needed to determine this novel locus.


Subject(s)
Genetic Linkage , Myopia/genetics , Adolescent , Adult , Aged , Aged, 80 and over , Female , Humans , Lod Score , Male , Microsatellite Repeats/genetics , Middle Aged , Pedigree , Polymorphism, Single Nucleotide , Refraction, Ocular/physiology , Young Adult
18.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 25(1): 59-62, 2008 Feb.
Article in Chinese | MEDLINE | ID: mdl-18247306

ABSTRACT

OBJECTIVE: To identify the mutations in the gap junction protein alpha3/alpha8 gene (GJA3 or GJA8) in the Chinese family with autosomal dominant congenital cataract (ADCC). METHODS: All subjects(5 family members and 100 unrelated control individuals)were undergone comprehensive ophthalmic examination, and genomic DNA was extracted from peripheral blood (5 mL). The exons and flanking introns of GJA3/GJA8 genes were amplified by polymerase chain reaction (PCR). Purified PCR products were then sequenced directly for screening disease-causing mutations. RESULTS: Upon bidirectional sequence analysis, a G-->A transition at nucleotide 138 (c.138G>A)in exon 2 of GJA8 was found, resulting in synonymous mutation of glycine (GGG) to glycine (GGA). An additional G-->T transvertion at nucleotide 139 (c.139G>T) in exon 2 of GJA8, resulting in a missense mutation of asparagines (GAU) to tyrosine (UAU) at codon 47 (D47Y). These two alterations were not seen in all unaffected members and 100 unrelated control individuals. Bioinformatic analyses also showed that a highly conserved region was located at Asp47. Meanwhile no sequence variations for GJA3 were detected from the 3 affected members. CONCLUSION: A novel disease-causing mutation (D47Y) of GJA8 gene in a Chinese family with ADCC is reported.


Subject(s)
Asian People/genetics , Cataract/congenital , Cataract/genetics , Connexins/genetics , Eye Proteins/genetics , Genes, Dominant/genetics , Mutation , Amino Acid Sequence , Base Sequence , Case-Control Studies , Child, Preschool , Connexins/chemistry , Conserved Sequence , Exons/genetics , Eye Proteins/chemistry , Family , Female , Humans , Male , Molecular Sequence Data , Pedigree
19.
Zhongguo Wei Zhong Bing Ji Jiu Yi Xue ; 18(5): 290-3, 2006 May.
Article in Chinese | MEDLINE | ID: mdl-16700995

ABSTRACT

OBJECTIVE: To investigate the relationship between inflammatory response and cell apoptosis in the perihematoma region in patients with intracerebral hemorrhage (ICH). METHODS: Surgical specimens were obtained from the area 1 cm adjacent to the hematoma. Thirty patients with ICH were divided into five groups: 6, 7, 5, 6, 6 patients in surgery<6 hours, 6-12 hours, 12-24 hours, 24-72 hours and >72 hours groups after the onset, respectively. The control group specimens were obtained from the brain tissues distant to the hematoma in the process of craniotomy in the patients of two former groups. Sections were stained with hematoxylin and eosin (HE) for the examination of pathological changes. Immunohistochemistry, terminal deoxynucleotidyl transferase mediated dUTP biotin nick end labeling (TUNEL) and reverse transcription-polymerase chain reaction (RT-PCR) were applied to determine apoptosis cells, Bax and Bcl-x protein and mRNA. RESULTS: The tissues from perihematoma region were almost normal in control group and <6 hours group. They were slightly damaged in 6-12 hours group, became worse in 12-24 hours group and most severe in 24-48 hours group, and they became better latter and were similar to the control group on 8th day. Infiltration of neutrophils, macrophages and lymphocyte appeared gradually at 6-12 hours, and became much more prominent at 12-24 hours (all P<0.01). The reactive gliosis began to appear at 24-72 hours, and enhanced after 72 hours (all P<0.01). The expression of the apoptosis and Bax protein increased gradually after 6 hours, reaching the peak at 12-24 hours (P<0.05 or P<0.01), and decreased gradually later. The changes in the levels of Bax mRNA were similar to that of the result of immunohistochemistry. Although the expression of Bcl-x protein and mRNA seemed to be increased at 12-72 hours, there was no significant difference between groups (P>0.05). The correlation analysis showed that the infiltration of neutrophils, macrophages and lymphocyte was positively correlated to the TUNEL positive cells and expression of Bax protein and mRNA (P<0.05 or P<0.01), and showed no correlation to Bcl-x protein and mRNA (all >0.05). CONCLUSION: There is a close relationship between inflammatory response and apoptosis and tissue damage in the perihematoma area in ICH.


Subject(s)
Apoptosis , Cerebral Hemorrhage/pathology , Hematoma/pathology , Adult , Aged , Cerebral Hemorrhage/physiopathology , Female , Hematoma/physiopathology , Humans , Inflammation/physiopathology , Male , Middle Aged , RNA, Messenger/genetics , Time Factors , bcl-2-Associated X Protein/biosynthesis , bcl-2-Associated X Protein/genetics , bcl-X Protein/biosynthesis , bcl-X Protein/genetics
20.
Yi Chuan Xue Bao ; 31(8): 830-5, 2004 Aug.
Article in Chinese | MEDLINE | ID: mdl-15481539

ABSTRACT

The ratio of purple line: no-purple line(13:3) was observed in six different F2 populations produced by crossing between parents with purple line and no-purple line in coleoptile. The backcross of XNA//XNA/ 21A150 (XNA, no-purple line and CMS, as the recurrent parent) resulted in a ratio of 1:1 (purple line: no-purple line). Genetic analysis showed that the expression of rice coleoptile purple line was influenced by two genes, inhibiting gene I and anti-inhibiting gene Ai(t). I gene inhibits P gene of C_A_P_ system and Ai(t) inhibits / gene, respectively. The gene pools of Ai(t) ai(t) and ai(t) ai(t) were constructed with BF1 of XNA//XNA/21A150. SSR analysis indicated that Ai(t) gene was linked with the markers of RM335, RM295, RM287 and RM21 and the genetic distance from Ai(t) to these four markers were 2.8 cM, 10.2 cM, 13.9 cM, 26.1 cM, respectively.


Subject(s)
Cotyledon/genetics , Genes, Plant , Microsatellite Repeats , Oryza/genetics , Chromosome Mapping , Genetic Linkage
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