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1.
PLoS One ; 11(4): e0151326, 2016.
Article in English | MEDLINE | ID: mdl-27096925

ABSTRACT

Image segmentation of medical images is a challenging problem with several still not totally solved issues, such as noise interference and image artifacts. Region-based and histogram-based segmentation methods have been widely used in image segmentation. Problems arise when we use these methods, such as the selection of a suitable threshold value for the histogram-based method and the over-segmentation followed by the time-consuming merge processing in the region-based algorithm. To provide an efficient approach that not only produce better results, but also maintain low computational complexity, a new region dividing based technique is developed for image segmentation, which combines the advantages of both regions-based and histogram-based methods. The proposed method is applied to the challenging applications: Gray matter (GM), White matter (WM) and cerebro-spinal fluid (CSF) segmentation in brain MR Images. The method is evaluated on both simulated and real data, and compared with other segmentation techniques. The obtained results have demonstrated its improved performance and robustness.


Subject(s)
Brain Mapping/methods , Brain/anatomy & histology , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Neuroimaging/methods , Algorithms , Humans
2.
Diagn Pathol ; 9: 207, 2014 Dec 24.
Article in English | MEDLINE | ID: mdl-25540017

ABSTRACT

BACKGROUND: Brain segmentation in magnetic resonance images (MRI) is an important stage in clinical studies for different issues such as diagnosis, analysis, 3-D visualizations for treatment and surgical planning. MR Image segmentation remains a challenging problem in spite of different existing artifacts such as noise, bias field, partial volume effects and complexity of the images. Some of the automatic brain segmentation techniques are complex and some of them are not sufficiently accurate for certain applications. The goal of this paper is proposing an algorithm that is more accurate and less complex). METHODS: In this paper we present a simple and more accurate automated technique for brain segmentation into White Matter, Gray Matter and Cerebrospinal fluid (CSF) in three-dimensional MR images. The algorithm's three steps are histogram based segmentation, feature extraction and final classification using SVM. The integrated algorithm has more accurate results than what can be obtained with its individual components. To produce much more efficient segmentation method our framework captures different types of features in each step that are of special importance for MRI, i.e., distributions of tissue intensities, textural features, and relationship with neighboring voxels or spatial features. RESULTS: Our method has been validated on real images and simulated data, with desirable performance in the presence of noise and intensity inhomogeneities. CONCLUSIONS: The experimental results demonstrate that our proposed method is a simple and accurate technique to define brain tissues with high reproducibility in comparison with other techniques. VIRTUAL SLIDES: The virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/13000_2014_207.


Subject(s)
Algorithms , Gray Matter/pathology , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , White Matter/pathology , Automation, Laboratory , Cerebrospinal Fluid , Computer Simulation , Humans , Models, Statistical , Predictive Value of Tests , Reproducibility of Results , Support Vector Machine
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